Phep025280.1
Basic Information
- Insect
- Pandemis heparana
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_963854515.1
- Location
- OY978032.1:7616202-7624317[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.01 0.68 11.2 0.5 1 21 836 856 836 857 0.94 2 26 7.8 5.2e+02 2.2 0.1 3 23 886 906 885 906 0.94 3 26 0.024 1.6 10.1 0.5 2 23 929 950 928 950 0.97 4 26 0.042 2.8 9.3 0.1 1 23 954 976 954 976 0.95 5 26 2 1.3e+02 4.0 1.7 1 21 981 1001 981 1004 0.78 6 26 0.063 4.2 8.7 0.5 1 23 1010 1033 1010 1033 0.95 7 26 0.00075 0.049 14.8 1.0 1 23 1040 1063 1040 1063 0.98 8 26 0.00058 0.038 15.2 0.9 3 23 1072 1092 1070 1092 0.96 9 26 0.015 0.98 10.7 0.3 1 23 1167 1190 1167 1190 0.96 10 26 0.78 51 5.3 0.3 2 23 1217 1239 1216 1239 0.92 11 26 3.6 2.4e+02 3.2 3.5 1 23 1261 1283 1261 1283 0.96 12 26 0.0002 0.013 16.6 0.5 1 23 1287 1309 1287 1309 0.98 13 26 4.4 2.9e+02 2.9 0.2 1 17 1314 1330 1314 1337 0.75 14 26 0.009 0.59 11.4 0.2 1 21 1343 1363 1343 1366 0.90 15 26 0.0047 0.31 12.3 1.2 1 23 1373 1396 1373 1396 0.97 16 26 0.0052 0.34 12.2 3.5 1 19 1403 1421 1403 1424 0.95 17 26 0.088 5.8 8.3 1.4 1 23 1441 1463 1441 1463 0.99 18 26 0.18 12 7.3 0.1 1 23 1506 1528 1506 1528 0.95 19 26 0.071 4.7 8.6 6.9 1 23 1596 1618 1596 1618 0.95 20 26 0.031 2 9.7 0.1 3 23 1624 1644 1623 1644 0.95 21 26 0.015 1 10.7 0.7 1 23 1652 1675 1652 1675 0.95 22 26 0.095 6.3 8.2 0.6 1 23 1681 1704 1681 1704 0.97 23 26 0.21 14 7.1 3.3 1 23 1710 1733 1710 1733 0.96 24 26 0.0007 0.046 14.9 0.2 1 23 1739 1761 1739 1761 0.96 25 26 9.1e-06 0.0006 20.8 1.8 1 23 1767 1789 1767 1789 0.99 26 26 0.0036 0.24 12.7 4.3 1 23 1795 1817 1795 1818 0.96
Sequence Information
- Coding Sequence
- ATGTTCACTGACTACTTTAAATCACTGGGCCATCGCTTTATTGTTGGAGGCGACTGGAATGCAAAGCACACCTACTGGGGCTCTAGATTGACAGTGACGAGGGGGCGTGAACTAAAAAAGAGTGTTGATATTAACAACCTGGTACCGTTATCTTCAGGAGAACCAACGTACTGGCCCACAGACAGTCAAAAAACTCCTGACTTGCTGGATTTCTTCATAACAAAAAACGTTTGTCAGCAGTACGTTGAAATAAAATCCTGCCTCGATGGCTCATCAGACCACACTCCAGTCATTCTTACGCTAAGCTCGACTATTCTGTCCCACTCTGCAAATCATGAACGTCTCTATAATCATAAAACTGACTGGAACTACTTTCGAGAGTATCTTGACCACAACATCAATTTAAAAATTCGTCTGAAAGACCAGAAAGACGTGGACGAAGCATGCTTGTACATCACAAATTTGATTCAAGTAGCTGCATGGAGAAGCACTCCTgaactaaaaaaagaaaatacccGTGTACCAATCCCTATGAATATTCGTGAGAAGCTACGAGAAAAACGTCGGCTTCGTCGAGTGTGGCAAGACTCGCGACTCAAGGAGGATAAGACCCGTCTCAACCGAGCGATTAAAGAACTTAAAGATCTACTTTCTGACTCCACCAATGAAACAATCAAACAACGTCTGGAAAATATGTCGCCAACAGCTTACGGTGAGCACTCACTATGGAAAGCAACTAAGAACCTGCCACAACCTCAACAATGCTTTCCACCCCTCAGGGCAGGCAGTACTTGGGCTCGAACTGACTCAGAAAAAGCTGAATTGTTTGGCAACCACCTAGCGGATGTATTTAAGCCCAATGATGCAAACACTCCAGAAGACCCAGACATAGACCTAATACTCAATCAAGACCTGCAGTTATGCTTACCCCTGCGTCCAACTTCTCCACGGGAATTAACAAAAGAAATAGCAAGTATGGATGCAAAAAAAGCTCCAGGATTTGACCTGATTACCCCTAGAATACTTAAAGAGCTGCCCAAGAAATGTATTGTCTTCCTCACAATCCTCATTAATGCCACATTCAGAGTCTCTCATGTTCCTGCTCTCTGGAAAGTATCCCAAATTGTTATGATACACAAGCCTGGCAAGCCAGTAAACGAAGTATCATCCTACCGTCCGATAAGCTTGACTCCGGTCTTATCCAAACTCTGGGAAAGGGTTGTTTTAACACGTCTAAAATATTACCTTGATGAACAACAAATCATACCTGATCATCAATTTGGGTTCCGAAAGCAGCATTCCACTGTAGAACAAGTGCACCGAGTATACTACTCAGTACGACGATGCTTCGAACAAAAACAATACTGCTCGGCAGCGTTTCTTGACGTTCAACAAGCCTTTGATCGGGTGTGGCACAGAGGACTCCTGTACAAGATCAAGAAACTATTACCACACTGTCTGTACCCGATAATGGCCTCGTATCTCCATGAAAGGATGTTTCAAGTGAAACACGGTGAAGCAAGATCCTCACTTAATTTCTGCCGTGCAGGAGTCCCTCAAGGATCTGTCCTTGGTCCGATATTATATAACATATTCACATGTGACTTACCCCAATCAAGCAACATTGATGTGGCCACCTTTGCGGATGATGCAGCCTTTCTAGCATGCAACAATGATCCCAATGAAGCAAGTAAAATCTTGCAGGCACAGCTGGACAACACCTACGAATGGTTAAACAAGTGGCGTATAAAAGCTAGTGCTCCTAAATCGCACCACATAACTTTTACACTTAGACGTGATACCTGCCCTCCAGTTAGACTGGGACAAGCTGAACTACCGCAGTCATCCTGCGTCAAGTATCTTGGGTTTTACTTGGATCGAAGAATGACCTGGAAAGATCACATAAAACACAAACGGGGAGAAGTTAACAACAGATTCAGAAACCTACTATGGCTACTTGGAAGACAGTCCGCTCTATCTCTGAGCAACAAGTTAAGAGTGTACTGCTCAGTTATCAAACCAGTTTGGACTTATGGGATCCAAATATGGTCCTCAGCCAGCAAATCTAATATTCTCTGCCTTCAAAGAgcccaaaataatatttttagggtATTGTGCGCTGCTCCCTGGTTCACTCGCATTAGTGAAATCCACGAATACCTGGAAATGCCGACTGTCCTCGAAGAGGCAAAGCGATATAGTTACAGCTACAAGGAGCGCCTCACTATCCACCCAAATCCACTGATTAACCCACTACTCGAGCCTCACTATGCCAGGCGCCTTAAAAGAGCTGATGTGCTGGACATTAATGGAAgaCGCAGCCAAAGCGAACACGAAACTGTGATAAAGATAGAGGCTACCGATGTACCGATAGAGCATTTGCTCAAGGAAAAGCCGCGGTACCAGAGGAGCGCTCGAGCGGAAGCTAGGCTCGCCACCAAGAAAAATGCTACCGCCATCCTTGCGTGCTGGTCTGTTGTTCCCTTCAGATGGAAAAGAAACCAGTTCAAATGCGCCTACTGCGAAGCCAGCTTTACAGACTGTAACCTCTTAAGGCTCCACGTAGCAACTTGCTCATCACAACATAGCGTTAAAGACATTTACAGCAAATTTAAAGAGATGTCCCTCATCAACATCGACGTGACTGAAGCATTATGCCGTCTCTGTTCTATGCCATACACAGACGTGAAACAGATGCGTGAACACGTCATCGATCACGGATACAATTTTGAAACGAAACAACCGGACGGCGTCCTCCCGTTTTGCCTTGATAAAGAATCGTGGAGATGTGTGATATGCCAAGAAAAGTTCAACAATTTCCTAAAACTCTATGAGCATATGAATGTGCATTATCAGCATTATATTTGTGCCACGTGCGGGAAGGGTTACATGACTGCGCCTAGATTGAGAAAACATTCAGAAGTGCATATAAGCGGATTGTTTCCGTGCAATGAATGTGTCCGGACATTTAAAATGCGGGCTGCGAGGGACCACCACAAGGCGCACGCCCACGCTAAAGCGCCGAGATACGAATGCCCCCAATGCAACATGCGTTTCGACGGTTACTACGATCGAATGAACCATTTAAATGAGACTCATAGAGAAAAGGAAGTCTCGTACAGTTGTCCGCATTGCGAACTTACATTCAAAACGTCAGGGAAGCGAGCGATTCACGTCCGAACGGTACATTTCCCACCTCAACGCGATTTTGGGTGTCGTTTTTGCGAGTGGAACTTTAAAACCGCTTACGAGCTTAAGAGGCATATGGTGAAACATACAGgttCCGCTAGTGCGGTAGCAGAGGCAAAAATAGGAGTTAGACGAGTTAGGAAGTTAAAGGACAACGTTAGCGCGCGGCAATTGCGCCGGCGTCGCCGCGCGAACAACGAGTTGCCCGAGGAGTCCGAAAAGCGAATATCAAAAACTATGATGCGGAGGAACGCTATGACGCTTCTCGAATGTTCTACCGCTTGGGCCTTCCGATGGTTCCACAGCGCGTTTTACTGCTCTTACTGTGATGCTAAGTTCGTAGACACCACCCCGTTACGTGAACACGTCCTAAGCAATCACCTAAAAGAACTAcccactaaaaaaatatttgcgaaATTGACTGAAAATAATATGGTTAAAATTGATATAGGGAACCTCAGCTGCAGGCTATGCAATCATCCTTTGACGGACGTAGACGATCTGAAAGACCATCTTGTATCTTTACACGGGAAGGTGTTAAACTCTAAATATAGTGATGGTGTTTTACCCTTCAAACTAGACCAAAACGGATTCTTTTGCCAAAAGTGCTTCTCCCACTTCATAAGTTTTGCTAAAGTGAACGAACATATTAATACACATTACAAAAATTACGTTTGCGATGCGTGCGGGAAAGCTTTCGTGTCTAAGTCCAGGTTCAGAACTCATGTGCAGTCTCATGAAACTGGGAGCTTCCCCTGTGGGGATTGTGGGGAAGTTCTAGTAACAAGGGCAGCTAGGATGTGCCATAGGCTGCGGGTGCACAAGAAGGGTGTGCGGTACACTTGCCCTCGATGCCCTGAAGTCTTCACAACGTATTACGCCCGCGCGAAGCACTTGGTAGACGACCATGCTCAGCAGCAAAGGGATTATGACTGCGCCGTTTGCGGGAAATCGTTTGAAACTAGCTGCAAAAGAGCAGCGCATTTCCGCACCGCCCACAAACCTACTGAGAAACGATACGAATGCCCTCAATGCCATTGGCACTTTTATTCTAATACGAAACTCAGACGCCACGAGTTTAAATCGGAGTGCAGCGATGGCGTTATACCATTTGTGCTGACGGGGAAGGAATACAGATGCGTACATTGTGATGTGCTTTTCGAAGGATTCATGAGTCTATTCATCCACATGAATAAGCATTATCAAAggtCCGTCGACCACAAACTTAAATGGAAACCGAAGCGCAAGTATAACGATCATAGAGACAACGCGGCTATTATAATTGAGTGTTCCAACGTCTGCCCGTTCAGGTGGAAGAGAGGCGCTTTCACCTGTGCGTTCTGTCCAATTTCCTTCGGAGACTTTAGCAGCGTGCGAGAACATGCGCTTGAGCATCCGAACCGGGTCGAGGCAATGCGTCTTGCGCGCCCCTTAGACAACGTCAAAGTAGAAATCAGTGACCTACGCTGCGAACTCTGTTTACTGCTAATGAAAGACGTAGAAACACTGAAGGATCATTTACTCCAAACTCATAACAAGCCAATAAGCAATGATCATAGCATCGGCATCACTCCTTTCTTAATTAACGGAAAGGACTTCCTTTGCACGCACTGCGGCGAACACTTCGAGCTTTTCTCAAAATTAAACACTCACATGAATCACCATTACCCTAATAACATTTGCTTTCTATGCGGCAAAGCTTTTGCCGCCGCCCACAGACTAAAAGCCCATTTAGTTATACACGAATCATCAAACGTTCTACAATATAAATGCTCGAAATGTGACGATGTCTTTACGACTAGGGCTTTGAAAAATAGTCACATGGCTTTAACACACGGTCCGGAGTATCGATACAGGTGTCCATACTGCAATGACTCATTCTTACGGTACTCGGATAGAGCTAAACATCTGAAAGTCGCGCACGACAGGAAAGTAGAATACCCTTGCCATTTATGTACAGCTGTGTTTTCCATGTGCAATCAACGCACCAAGCATATACAGCAGGTCCATATAAGGCATAAACAGTTTTTCTGCGCGTTGTGTCCGTACCAATTTGTCACAGCGGCCCAGCTTAGGAATCACATGGTCAAACACATAGGGGAGAGAAAATACCAATGTCAAGTTTGTAAGAAGTCCTACGCGAGAACCAAAACGTTGAGAGAGCACATGCGTATACATAATAATGATAAGCGGTTTGTGTGCGAGTTTTGTAATAGTGCTTATGTGCAGAAATGTAGTTTGCAGAGTCATATCAGAACCCATCATCCTAATGCTGATCCTATAAAGAAACTGCGGTTGCCTAATATGTActga
- Protein Sequence
- MFTDYFKSLGHRFIVGGDWNAKHTYWGSRLTVTRGRELKKSVDINNLVPLSSGEPTYWPTDSQKTPDLLDFFITKNVCQQYVEIKSCLDGSSDHTPVILTLSSTILSHSANHERLYNHKTDWNYFREYLDHNINLKIRLKDQKDVDEACLYITNLIQVAAWRSTPELKKENTRVPIPMNIREKLREKRRLRRVWQDSRLKEDKTRLNRAIKELKDLLSDSTNETIKQRLENMSPTAYGEHSLWKATKNLPQPQQCFPPLRAGSTWARTDSEKAELFGNHLADVFKPNDANTPEDPDIDLILNQDLQLCLPLRPTSPRELTKEIASMDAKKAPGFDLITPRILKELPKKCIVFLTILINATFRVSHVPALWKVSQIVMIHKPGKPVNEVSSYRPISLTPVLSKLWERVVLTRLKYYLDEQQIIPDHQFGFRKQHSTVEQVHRVYYSVRRCFEQKQYCSAAFLDVQQAFDRVWHRGLLYKIKKLLPHCLYPIMASYLHERMFQVKHGEARSSLNFCRAGVPQGSVLGPILYNIFTCDLPQSSNIDVATFADDAAFLACNNDPNEASKILQAQLDNTYEWLNKWRIKASAPKSHHITFTLRRDTCPPVRLGQAELPQSSCVKYLGFYLDRRMTWKDHIKHKRGEVNNRFRNLLWLLGRQSALSLSNKLRVYCSVIKPVWTYGIQIWSSASKSNILCLQRAQNNIFRVLCAAPWFTRISEIHEYLEMPTVLEEAKRYSYSYKERLTIHPNPLINPLLEPHYARRLKRADVLDINGRRSQSEHETVIKIEATDVPIEHLLKEKPRYQRSARAEARLATKKNATAILACWSVVPFRWKRNQFKCAYCEASFTDCNLLRLHVATCSSQHSVKDIYSKFKEMSLINIDVTEALCRLCSMPYTDVKQMREHVIDHGYNFETKQPDGVLPFCLDKESWRCVICQEKFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHSEVHISGLFPCNECVRTFKMRAARDHHKAHAHAKAPRYECPQCNMRFDGYYDRMNHLNETHREKEVSYSCPHCELTFKTSGKRAIHVRTVHFPPQRDFGCRFCEWNFKTAYELKRHMVKHTGSASAVAEAKIGVRRVRKLKDNVSARQLRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFHSAFYCSYCDAKFVDTTPLREHVLSNHLKELPTKKIFAKLTENNMVKIDIGNLSCRLCNHPLTDVDDLKDHLVSLHGKVLNSKYSDGVLPFKLDQNGFFCQKCFSHFISFAKVNEHINTHYKNYVCDACGKAFVSKSRFRTHVQSHETGSFPCGDCGEVLVTRAARMCHRLRVHKKGVRYTCPRCPEVFTTYYARAKHLVDDHAQQQRDYDCAVCGKSFETSCKRAAHFRTAHKPTEKRYECPQCHWHFYSNTKLRRHEFKSECSDGVIPFVLTGKEYRCVHCDVLFEGFMSLFIHMNKHYQRSVDHKLKWKPKRKYNDHRDNAAIIIECSNVCPFRWKRGAFTCAFCPISFGDFSSVREHALEHPNRVEAMRLARPLDNVKVEISDLRCELCLLLMKDVETLKDHLLQTHNKPISNDHSIGITPFLINGKDFLCTHCGEHFELFSKLNTHMNHHYPNNICFLCGKAFAAAHRLKAHLVIHESSNVLQYKCSKCDDVFTTRALKNSHMALTHGPEYRYRCPYCNDSFLRYSDRAKHLKVAHDRKVEYPCHLCTAVFSMCNQRTKHIQQVHIRHKQFFCALCPYQFVTAAQLRNHMVKHIGERKYQCQVCKKSYARTKTLREHMRIHNNDKRFVCEFCNSAYVQKCSLQSHIRTHHPNADPIKKLRLPNMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -