Basic Information

Insect: Pandemis heparana
Gene Symbol: -
Assembly: GCA_963854515.1
Location: OY978033.1:212349-222219[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0014 0.09 14.0 3.8 3 21 124 142 122 143 0.91

2 21 4.4e-06 0.00029 21.8 2.2 1 23 163 185 163 185 0.99

3 21 0.0073 0.48 11.7 0.9 1 23 191 213 191 213 0.95

4 21 0.02 1.3 10.3 7.2 1 23 220 242 220 242 0.96

5 21 7.5e-05 0.005 17.9 6.8 1 23 248 270 248 270 0.98

6 21 0.00016 0.01 16.9 4.4 1 23 276 298 276 298 0.98

7 21 0.00051 0.034 15.3 3.7 2 23 305 327 305 327 0.97

8 21 1.1e-05 0.00072 20.6 5.5 1 23 333 355 333 355 0.97

9 21 7.6e-05 0.005 17.9 2.7 1 23 361 383 361 383 0.98

10 21 8.9e-06 0.00059 20.9 3.1 1 23 389 411 389 411 0.98

11 21 0.00011 0.007 17.5 0.6 1 23 417 439 417 439 0.97

12 21 5.9e-07 3.9e-05 24.6 1.9 1 23 445 467 445 467 0.96

13 21 1.8 1.2e+02 4.2 0.0 3 23 695 715 693 715 0.94

14 21 0.55 36 5.8 2.5 1 23 722 744 722 744 0.96

15 21 0.0059 0.39 12.0 4.6 1 23 775 798 775 798 0.97

16 21 0.057 3.7 8.9 0.3 3 23 805 826 804 826 0.94

17 21 0.0066 0.44 11.8 0.4 2 23 879 901 878 901 0.95

18 21 2 1.3e+02 4.0 0.2 3 23 908 929 907 929 0.95

19 21 0.00024 0.016 16.4 0.9 1 23 948 970 948 970 0.98

20 21 0.0016 0.11 13.7 3.3 1 23 976 999 976 999 0.95

21 21 0.011 0.72 11.1 0.2 2 23 1007 1029 1006 1029 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0014	0.09	14.0	3.8	3	21	124	142	122	143	0.91
2	21	4.4e-06	0.00029	21.8	2.2	1	23	163	185	163	185	0.99
3	21	0.0073	0.48	11.7	0.9	1	23	191	213	191	213	0.95
4	21	0.02	1.3	10.3	7.2	1	23	220	242	220	242	0.96
5	21	7.5e-05	0.005	17.9	6.8	1	23	248	270	248	270	0.98
6	21	0.00016	0.01	16.9	4.4	1	23	276	298	276	298	0.98
7	21	0.00051	0.034	15.3	3.7	2	23	305	327	305	327	0.97
8	21	1.1e-05	0.00072	20.6	5.5	1	23	333	355	333	355	0.97
9	21	7.6e-05	0.005	17.9	2.7	1	23	361	383	361	383	0.98
10	21	8.9e-06	0.00059	20.9	3.1	1	23	389	411	389	411	0.98
11	21	0.00011	0.007	17.5	0.6	1	23	417	439	417	439	0.97
12	21	5.9e-07	3.9e-05	24.6	1.9	1	23	445	467	445	467	0.96
13	21	1.8	1.2e+02	4.2	0.0	3	23	695	715	693	715	0.94
14	21	0.55	36	5.8	2.5	1	23	722	744	722	744	0.96
15	21	0.0059	0.39	12.0	4.6	1	23	775	798	775	798	0.97
16	21	0.057	3.7	8.9	0.3	3	23	805	826	804	826	0.94
17	21	0.0066	0.44	11.8	0.4	2	23	879	901	878	901	0.95
18	21	2	1.3e+02	4.0	0.2	3	23	908	929	907	929	0.95
19	21	0.00024	0.016	16.4	0.9	1	23	948	970	948	970	0.98
20	21	0.0016	0.11	13.7	3.3	1	23	976	999	976	999	0.95
21	21	0.011	0.72	11.1	0.2	2	23	1007	1029	1006	1029	0.97

Sequence Information

Coding Sequence: ATGTCGGTTGAGAATGTGTACGTCAAGGAAGAACCAAAGTGGGAGGATGAGAACGATACGACCAGTGACGCGAAAGTTGAGGACACAGATGACAACCAAGCGAATTTTGAAGCATACCATGACATCAAAGTAGAGGTGGTACTAGAGCATGATGGGGAACCAGATGATCCCAACTGCATACTAGACCCATTGAAGCAAGAAGAGCTAGGAGATGCCAAGCAGGAGCCAACTCAGGCCAGCGCAGAGGGAGCTCCTGTACCCATAGCCATCACAGCGTACTCCGGGAAGGGCCCTCACTCCAACTACACCATACAAGTACCAAATAGACTCGAACTAGAATGCATCGTTGATGACTACAAGCTACACTTATGCACAACATGCCACAAAGTGTTTGAACAACAATCAGAACTCCAAAACCACGAATGTACGGCACAAGCTGGGGTTAGTAATAATTTAAACAAACCTAAAATAGACCCACAAAAGAAATTCACGTGCAACACTTGCGGGAAAGGGTTTGCACACAAAAAGGTTTTGATACGTCACATAAAAACTCACACAGAAAGTAAGCCTTACGTGTGTGAAGTTTGCGAGAAACCTTGCAAGACTTTCACAGGTCTCAAACAGCATGCCGTTTCGCACACAACAGACAAAAAAGAGTACAAATGTGATGTGTGCCATAAAAAGTTTAAGTTCCTATGCTTTTTGAAGCGACACGCTCTCCTTCACACGGGCGAGAAACCGTATCACTGCGAGGTGTGCAAACGGCAGTTCGCGCAACATTCGCACCTTTTAAAACACATGCGCATACACACAGGCGAGAAACCGTTCCAATGTCCAACGTGCAACAAAAAGTTTAGATGCAAATCTAATTTGGTACAACATCAACTCATGCATACACGAGACCCGCCGCCCACATGCCACATATGCAACAAACAATACCAACAGCAGATACACCTAGAGAAACACATCATGCGGATCCATCAAGGCATAAAACCTTACACGTGTGAGATATGCCACAAACCTTTCCGGGACAAGTGTGATTTGAAACGGCACATGCTGTTTCACACAGGCGAAAAACCGTATTCATGCCAAGTCTGCCAGAAACAGTTTGCGCAGAACTGCATGCTCACCCAGCACATGCAGATACACACAGGTGTCAAACCTTACGAGTGCGAGATTTGCAATAAACAGTTCCGACGGAGGTCACATCTGGATCTACACAAACgtatacacacaggtgagaaaccgcaTGTGTGTGGTATATGTAATAAACAGTTCACGGAGGGGCGCAATTTGGCCATGCATATGCGTATACACACGGGCGAGAAACCGCATGCGTGTGAGATGTGTGACAAGCAGTTCACACAGAAGTCTACTTTAATTAATCATATGCGGATCCATACAAGTGAGAAATCGTACGCGTGCGAGGTGAGGAAGTGGGACGGGTGTCCGCAGCACGTCTGCGTGTGGTGCCGGACTCAGCTGCTCAAGTCCTCGGCACTCCGGAGACAGTGCGAGCGCTCCCAGGCCATCCTGCATGAGACATTACTGGAGAATCATGCAgtAAAAATGGATTACCTTCGCACCATAGACCGTGTGGCGCAAAAACTAAGTCATAATCTAAAAACCTGTGCCGTATACACCACAGACTCCACACAACCAGAAGAAATTAAATTAGAAGAAACAATCAAAGAGGAAACCAACGATTTTGTAGAAAACATATTCATAAATGAACCCGATATCGATGATTATGATGAAACTCACAGTGAAATCAATGAAGCAGATAAAATAGAAGAAGCTGttgcaaatgtaaaaaaaagactAATCAAATCTAGAAAAAGGAAAAAGCGTGATCCAAAAGAAATTGTCAAAAAGAAACCGAAAGTTGCTGAAACTAATCCCGACAAAACGAAGAGGATAATAAAAAGGCGAATGGCTGACAATGGTTTTCTTCCTGATTTCGATTTTGATGAGTTTCAAAACAAGTATAATGTTAGGATTGACATTTTGAGCAAGGAAGAACAGCTGAGAGAGGTTGAGGGGAGGAAGATGGCCGCCAGTTTTGCTCTCGCTGCGTTCGGGTGCGAGGTGTGCGGGAAGGGGATCGCGACTAAAGCTGTGTACGACGGGCACATGGCTAAGCATAGTGCGAGCGCGGGCGCGCATGCGTGCGAGATCTGCCTTGTGCGTTTCCGGACGCGGAGCCGTGCGCACGTCCATCAGGACACGCACCGCCTCAAGTTCACGTGCGAGGCCTGCGGGTTCGTGACAAGAACTAGGTTCATAGCCAAGAACCATTTCCTTTCGCACGCCGGAACGACGCACAAATGCCCCCACTGCGACGCCATTTTCAGCAAGTACACGTCGTACCTGACGCACGTGCGGCGCCGGCACCCGGCCGCCAACGCGCCGTGCGAGCTGTGCGGCGAGACGTTCGTCGGCGACAACGGTCTGCGGCACCACAAGACCCGCGCGCATAGAAACACAGAGTTGTCGGTGCCGGTGTTCGAGTACGAGTGCGCAGCGTGCGGCGCGCAGTTCgccagcgcggcggcgcgggacaCGCACGCGGCGCCCGGGGGCTGCCACGACGCCATGAGGTTCCCCACACTTACTAAAGCCCGTGTCATAACGCCGTGCCCGCACTGCGGCGAGGAGTGCGGCAGCGACGAGGGGCTGGCGCGCCACCAGCGGGAGCTGCACGCGCAGGGGCCGCTGCTGTGCCGAGAGTGCAACAAGTGGTTCAGCGGCGCGCGCTCGCTGGGCGTGCACCGCGCGCGCGTGCACCTGCAGCAGCGGCTGAAGGAGcccccgcgcgcgcgcccgcgccccgcgcacgcCTACATGTGCGAGACCTGCGGGAACGAGTGCTCGTCGCTGACGAACTTGGCCGCCCATCAACGCAGCCACTCGGGCACCAAGCCGCACGCCTGCCCCGGCTGCGCGCTGCGGTTCAGCAGCCAGCACAACATGCTGCGACACCACCGCGTGgtacacCTAGGTCAACGACCGCAAGTAAAGTGTGGCACGTGCGGCAAGCTGCTGGCGCATGCGGCATCGCTCAAGCTGCACGTCAACACGGTGCATCTGAAGTTGCCGCTTCCGCCGCGACAGAGGCGGCGCGACAAATCATaa
Protein Sequence: MSVENVYVKEEPKWEDENDTTSDAKVEDTDDNQANFEAYHDIKVEVVLEHDGEPDDPNCILDPLKQEELGDAKQEPTQASAEGAPVPIAITAYSGKGPHSNYTIQVPNRLELECIVDDYKLHLCTTCHKVFEQQSELQNHECTAQAGVSNNLNKPKIDPQKKFTCNTCGKGFAHKKVLIRHIKTHTESKPYVCEVCEKPCKTFTGLKQHAVSHTTDKKEYKCDVCHKKFKFLCFLKRHALLHTGEKPYHCEVCKRQFAQHSHLLKHMRIHTGEKPFQCPTCNKKFRCKSNLVQHQLMHTRDPPPTCHICNKQYQQQIHLEKHIMRIHQGIKPYTCEICHKPFRDKCDLKRHMLFHTGEKPYSCQVCQKQFAQNCMLTQHMQIHTGVKPYECEICNKQFRRRSHLDLHKRIHTGEKPHVCGICNKQFTEGRNLAMHMRIHTGEKPHACEMCDKQFTQKSTLINHMRIHTSEKSYACEVRKWDGCPQHVCVWCRTQLLKSSALRRQCERSQAILHETLLENHAVKMDYLRTIDRVAQKLSHNLKTCAVYTTDSTQPEEIKLEETIKEETNDFVENIFINEPDIDDYDETHSEINEADKIEEAVANVKKRLIKSRKRKKRDPKEIVKKKPKVAETNPDKTKRIIKRRMADNGFLPDFDFDEFQNKYNVRIDILSKEEQLREVEGRKMAASFALAAFGCEVCGKGIATKAVYDGHMAKHSASAGAHACEICLVRFRTRSRAHVHQDTHRLKFTCEACGFVTRTRFIAKNHFLSHAGTTHKCPHCDAIFSKYTSYLTHVRRRHPAANAPCELCGETFVGDNGLRHHKTRAHRNTELSVPVFEYECAACGAQFASAAARDTHAAPGGCHDAMRFPTLTKARVITPCPHCGEECGSDEGLARHQRELHAQGPLLCRECNKWFSGARSLGVHRARVHLQQRLKEPPRARPRPAHAYMCETCGNECSSLTNLAAHQRSHSGTKPHACPGCALRFSSQHNMLRHHRVVHLGQRPQVKCGTCGKLLAHAASLKLHVNTVHLKLPLPPRQRRRDKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -