Basic Information

Insect: Pandemis heparana
Gene Symbol: HIVEP1
Assembly: GCA_963854515.1
Location: OY978033.1:759740-762147[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.6e-05 0.0017 19.4 1.8 1 23 176 198 176 198 0.99

2 14 0.00021 0.014 16.5 0.7 1 23 204 227 204 227 0.94

3 14 0.00046 0.031 15.5 9.1 1 23 244 266 244 266 0.97

4 14 5.2e-06 0.00034 21.6 3.9 3 23 274 294 273 294 0.97

5 14 0.0023 0.15 13.3 0.5 1 23 300 322 300 322 0.97

6 14 9.4e-08 6.2e-06 27.1 1.0 1 23 328 350 328 350 0.96

7 14 1e-05 0.00066 20.7 2.0 1 23 356 378 356 378 0.95

8 14 3.2e-07 2.1e-05 25.4 1.5 1 23 384 406 384 406 0.98

9 14 1.9e-06 0.00013 23.0 0.7 1 23 412 434 412 434 0.95

10 14 1.5e-06 9.6e-05 23.3 2.2 1 23 440 462 440 462 0.96

11 14 0.0037 0.24 12.6 3.9 1 23 468 490 468 490 0.97

12 14 6.3e-07 4.2e-05 24.5 2.6 3 23 498 518 497 518 0.99

13 14 6.6e-06 0.00043 21.3 1.1 1 23 524 546 524 546 0.97

14 14 9e-07 5.9e-05 24.0 3.0 1 23 552 575 552 575 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.6e-05	0.0017	19.4	1.8	1	23	176	198	176	198	0.99
2	14	0.00021	0.014	16.5	0.7	1	23	204	227	204	227	0.94
3	14	0.00046	0.031	15.5	9.1	1	23	244	266	244	266	0.97
4	14	5.2e-06	0.00034	21.6	3.9	3	23	274	294	273	294	0.97
5	14	0.0023	0.15	13.3	0.5	1	23	300	322	300	322	0.97
6	14	9.4e-08	6.2e-06	27.1	1.0	1	23	328	350	328	350	0.96
7	14	1e-05	0.00066	20.7	2.0	1	23	356	378	356	378	0.95
8	14	3.2e-07	2.1e-05	25.4	1.5	1	23	384	406	384	406	0.98
9	14	1.9e-06	0.00013	23.0	0.7	1	23	412	434	412	434	0.95
10	14	1.5e-06	9.6e-05	23.3	2.2	1	23	440	462	440	462	0.96
11	14	0.0037	0.24	12.6	3.9	1	23	468	490	468	490	0.97
12	14	6.3e-07	4.2e-05	24.5	2.6	3	23	498	518	497	518	0.99
13	14	6.6e-06	0.00043	21.3	1.1	1	23	524	546	524	546	0.97
14	14	9e-07	5.9e-05	24.0	3.0	1	23	552	575	552	575	0.97

Sequence Information

Coding Sequence: ATGTCAGTGGAGATTGTTCGTGTGAAGGAGGAACCAAAGTGGGAGGAGGAATGTGACGAGAAGGAGGCAACGAAGGTGGACTCCGGGACTGTGCCAAATGTCAAACTTGAGGCCGACATAcatcataaaattaaaatcgaGGTTGAATTGGATTCGGGACTTGAGCTGCCACATACAGAGTACCCTGCTCAAGACCCATTAACTCAAGAAGCACCTGCAGCTGTCAAACAGGAGCCTCAGAGTGGTGCCCCGCCATGCCTTGGGGAGAGCCCTGTCTCCGCAGACACCCTGCAGAGTCAGTCACACATCTTCACCATCAAGCTTGAACGTATAACTCCTGACGACGAAGATAATAAGCCGAAACTGTGCAATAATGACCAAAATAACACGCATAAACTCGATTTCAACTTGGACAAGAAACATGATGTCAAACAAGAAGTTCAAATTCAAACCAaagaagaaattaaaataactaaaccCAAGAAAGTTAGGAAACCGCGTCAATATAATAAAGACACGAATATCTTCACTTGCGACTATTGCAACACAAACTTTGTGCATAAAAGTGTTTTGGTTGATCACATAAGAATGCACACAGGTGGCAAACCGTATTCGTGCATAGAATGTAAGAAACCGTTTATAACTTACAGTAGCCTGAAGCGGCATTCGCGCGTCGTTCACAAAACTATACTAAAACATCATACATTTATACATGAGGGTGAGAAAGGACATTCCTGTCACGTATGCTTTAAACAGTTCACACGCAAACATCATTTAATTGACCATATGCTTATTCACACAAAAGATAAATCGGAATGCTGCCAAGTGTGTAACAAGCAGTTCTCGCGCAAGTCCACCTTGGTCAATCACATGCGGATTCACTCAGGCGAGAAACCGTACCGATGCGAAGTGTGCAGCGCCCGATTTCGGAGAGACAATGACTTGAAACTACACTCGCTCGTTCACACGGGGCAGAAATCGCACGCGTGCAAAGTTTGTCCGAAAGTGTTCTCGAGAAGCTCTACTCTAGCCACACACATGCGTGTTCACACCGGCGAGAAACCCCACGCTTGTCCAGTTTGCCAGAAACAGTTTTCACACAAAGACAGTTTGAATAAGCATGTAGCAATCCATTCTGGACTGAAACCGTTTTCGTGCGATGTATGCACGAAAACCTTCCGACGCCAGTCTTACTTGGCTTTGCATATGCGCCTCCACACAGGAGACAGGCCGCACGCGTGCGACGTCTGCAACAAAAAATTCACACAAAAAAGCAATTTGGCTGTGCACGTTTTAATCCACAAAGGCGAGAAACCCCACGCTTGTACGGTGTGTGAGAAACGATTCACACAGAAAGACACATTGACTAAGCACATGTTGATTCATACTGGTGAAAAGGAGTTTGCGTGTGAAATTTGTAACAGACAGTTTAGGATCAAGTGTCACCTTGTGGAACACAGACTCACCCACACCGGCGAGAAGCCCCATGGTTGCAATATTTGTCACAAGCGTTTTTCACAAAAGGGTAGCCTAAACAAGCATATACGAATACATACGGGAGAGGAGCCTTTTTCCTGTGCTGTATGCAAAAAACAATTCAAGGATCGCTCCAATTTGATACAACACGAACGCCTCCACAACGGAGCTAGACCCCACTCTTGTCCAAtttgtaaaaagttattttCGAATAAGTCTAATGTAACTAAACATATGCGAAGGGTTCATATAGATCGGGAAGAAGAATTTACACCTTAA
Protein Sequence: MSVEIVRVKEEPKWEEECDEKEATKVDSGTVPNVKLEADIHHKIKIEVELDSGLELPHTEYPAQDPLTQEAPAAVKQEPQSGAPPCLGESPVSADTLQSQSHIFTIKLERITPDDEDNKPKLCNNDQNNTHKLDFNLDKKHDVKQEVQIQTKEEIKITKPKKVRKPRQYNKDTNIFTCDYCNTNFVHKSVLVDHIRMHTGGKPYSCIECKKPFITYSSLKRHSRVVHKTILKHHTFIHEGEKGHSCHVCFKQFTRKHHLIDHMLIHTKDKSECCQVCNKQFSRKSTLVNHMRIHSGEKPYRCEVCSARFRRDNDLKLHSLVHTGQKSHACKVCPKVFSRSSTLATHMRVHTGEKPHACPVCQKQFSHKDSLNKHVAIHSGLKPFSCDVCTKTFRRQSYLALHMRLHTGDRPHACDVCNKKFTQKSNLAVHVLIHKGEKPHACTVCEKRFTQKDTLTKHMLIHTGEKEFACEICNRQFRIKCHLVEHRLTHTGEKPHGCNICHKRFSQKGSLNKHIRIHTGEEPFSCAVCKKQFKDRSNLIQHERLHNGARPHSCPICKKLFSNKSNVTKHMRRVHIDREEEFTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01135019;
90% Identity: iTF_01135019;
80% Identity: -