Phep009649.1
Basic Information
- Insect
- Pandemis heparana
- Gene Symbol
- -
- Assembly
- GCA_963854515.1
- Location
- OY978014.1:4401470-4409848[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-08 4.2e-05 23.9 0.0 3 37 16 50 15 54 0.94 2 2 5.8 8.8e+03 -2.7 0.0 27 39 384 397 384 402 0.84
Sequence Information
- Coding Sequence
- ATGCCAAGACACTACCAGAGGAAGACCGTTACAAGATATCAATTGGAAAGCCTGAGGAAGGCTGTCGATGATGTTAGAAACAACAAACTGACACCGAGCAAAGCTTCTGTTGTTTATTGTGTGCCTAAATCGACAATATATAACCATCTCATCGGACCAGAAAGAGAACCGGGACGTGGGCACAAACGTGTGTTCAATCAAACAAATGAGAAACGACTAAAAGAGCACATTATAAAATGCCACCAGTTGCATAACGCTATAACTGCGAATGTTGTACGAAAAATGGCGTTTAAATTTGCTGAATCGCACAAAATGAAGCACAATTTTGATAAGAAATCCGAAATGGCCGGTAGAGATTGGTTGTTCGGGTTTCTAAAAAGACATCCTGAAGTGGTAAGTTTAGTGCCCAGAAAAGTTGAATCGACTGCAAATGGAGTTGCAGCGTTTGATGAAGGTGACGTGTTGAAGTTTTTTGATAACCTAATGGCTCAAGAAATAATACACTGCGATAATGACAATGACACTGAACCAGCAACTTATAATGTCAGAAAGAGATGGAACGAAATAAGGAGAGAAAGAGGCGAGGGACGCGAAATAAGAATTAAAAACATTGCGCAGATAGGAAATATGATGAAGAGAAATGAAGTCACGGAAACGAATTTCGCGGAAATACACCCAGAACTAGATAAAAGAGAGAAGAATATACCTTTGAAAAAACCAACGCAGCGTCAAAAACTATCAAGCCGAAATAATAGCCAACGTTATAAACCTTACCCTCAAATATTAAAAGAAAAGCAATCAGAAACGTTTCGCGACGTTGATTCTGAGCCAGAAGTGACTCTAAATTTTGAAGTAGTTGAAACTAATGATCCTTTGCAGGCGTTATCTACTCCAGGCCCCTCAAGATTTATCCTTGATCCTGGTTCTGATGAAATTGCTGATGGTAACGAAGCACTCGATGTCTTATCACAAGTAGTCCAAGAGTATTCTCCTAAAAAGGCAAGTAAAGATCCATTTCGTCAGCTATCATCCGCGATTTCATTGGAATTCGAAgttaaaaaagaaaacacaGATGATTTGACAAGGGCACCAGAAGTGACACTAGCTGATTTTGATATAGCTTctaaagatgatgatgattctcaAGGTGATGTTTCAAAGAACGTTTTAAATTTATCGCATTTCCGCTCTGATGTCTCAGAATCGAATTCAGATTCTTCTGTGTATTTTAAAGCTCGTAAGTCGAAACAGAAAGTAACAACAGAGTTATTGTTCCAGAGATACAAATTGAAATCTAAGAGGGAGATAGATAGGCTGCATAGTAAGATTAGAGAACTTAAAGCATCAGTGGATAGGTATAAAAGAGAGGTTCACAGGTTGCGACGGCAAAAACACGTGTGA
- Protein Sequence
- MPRHYQRKTVTRYQLESLRKAVDDVRNNKLTPSKASVVYCVPKSTIYNHLIGPEREPGRGHKRVFNQTNEKRLKEHIIKCHQLHNAITANVVRKMAFKFAESHKMKHNFDKKSEMAGRDWLFGFLKRHPEVVSLVPRKVESTANGVAAFDEGDVLKFFDNLMAQEIIHCDNDNDTEPATYNVRKRWNEIRRERGEGREIRIKNIAQIGNMMKRNEVTETNFAEIHPELDKREKNIPLKKPTQRQKLSSRNNSQRYKPYPQILKEKQSETFRDVDSEPEVTLNFEVVETNDPLQALSTPGPSRFILDPGSDEIADGNEALDVLSQVVQEYSPKKASKDPFRQLSSAISLEFEVKKENTDDLTRAPEVTLADFDIASKDDDDSQGDVSKNVLNLSHFRSDVSESNSDSSVYFKARKSKQKVTTELLFQRYKLKSKREIDRLHSKIRELKASVDRYKREVHRLRRQKHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -