Phep021431.1
Basic Information
- Insect
- Pandemis heparana
- Gene Symbol
- tfap2e
- Assembly
- GCA_963854515.1
- Location
- OY978027.1:5532880-5550827[+]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.8e-24 8.4e-20 72.2 0.1 1 46 34 79 34 82 0.97 2 7 1.9e-10 5.8e-06 27.0 0.3 21 46 83 108 80 111 0.94 3 7 2.9e-10 8.7e-06 26.5 0.0 21 44 112 135 110 140 0.94 4 7 6.4e-11 1.9e-06 28.6 0.1 22 46 142 166 139 169 0.94 5 7 3.3e-10 1e-05 26.3 0.0 21 44 170 193 166 197 0.94 6 7 3.6e-10 1.1e-05 26.1 0.0 21 44 199 222 195 227 0.94 7 7 1.6e-67 4.8e-63 213.3 0.0 21 196 228 400 225 401 0.96
Sequence Information
- Coding Sequence
- ATGGATGACACGACAGGGTTCATGACTGACCTTCCTTTATtaaaaaCGATAAAAGGCCGAGACGGACTCGGCGGCGGCTCCTGCACACCCAACGACGTATTCTGCTCCGTCCCGGGACGACTGTCACTCCTATCGTCGACCAGCAAATACAAAGTGACCGTAGCGGAAGTGCAGCGTCGCCTGTCACCGCCGGAGTGTCTCAACGCGTCGCTGCTCGGCGGCGTACTACGGCGCGAATACAGTGACGTAACTGAAGTGCAGCGTCGCCTGTCTTTGCTGGAGTGTCTCAACGCGTCGCTGCTCGGCGGCGTACTACGGCGCGAATACAGTGACGTAACTGAAGTGCAGCGTCGCCTGTCCCCGCCGGAGTGTCTCAACGCGTCGCTGCTCGGCGATGTGCTACGGTACGAATACAGTGACATAACCGAAGTGCAGCGTCGCCTGTCCCCGCCGGAGTGTCTCAACGCGTCACTGCTCGTCGGCGTACTACGGCGCGAATACACTGACGTAACTGAGATGCAGCGTCGCTTGTCCCCACCGGAGTGTCTCAACGCGTCGCTGCTCGGCGATGTGCTGCGGTGCGAATACAGTGACGTAACTGAAATGCAGCGTCGCTTGTCCCCACCGGAGTGTCTCAACGCGTCGCTGCTCGGCGATGTGCTGCGGTGCGAATACAGTGACGTAACTGATGTGCAGCGTCGCCTGTCTCCGCCGGAGTGTCTGAACGCGTCCCTACTCGGCGGCGTGCTGCGGCGAGCAAAGAGTAAAAATGGCGGTCGCCTGCTTCGAGAGAAACTGGAAAAGATAGGACTGAACCTGCCGGCGGGGCGACGGAAAGCTGCCAACGTCACGCTACTCACCAGCCTAGTCGAAGCGGAAGCGGTGCACCTAGCCCGTGACTTCGGCTACGTGTGCGAGACGGAGTTccctgcgcgcgcgctggccgagTACCTCGCGCGGCAGTACGCCGAGCACgacgcgcgccggcgccgcgaccTGTTGCAGGCCACCAAACAGGTGACCAAGGAGCTGATGGACCTGTTGAACCAGGACCGCTCGCCGCTCTGCAACACGCGGCCCCCGCACCTCCTGGAGCCGGCGATACAGCGGCACCTCACGCACTTCTCGCTCATCTCGCACGGCTTCGGCGGGCCGGCCATCGTCGCCGCGCTCACCGCCATACAGAATTTCCTAAACGAGTCCCTGAAGCATTTAGATAAACTATATCCCCAAAGCGGCATGGTGTCGTCATCGATGGACAAGACCAAAATGGACCCCGACATCAAGAAGTAA
- Protein Sequence
- MDDTTGFMTDLPLLKTIKGRDGLGGGSCTPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRREYSDVTEVQRRLSLLECLNASLLGGVLRREYSDVTEVQRRLSPPECLNASLLGDVLRYEYSDITEVQRRLSPPECLNASLLVGVLRREYTDVTEMQRRLSPPECLNASLLGDVLRCEYSDVTEMQRRLSPPECLNASLLGDVLRCEYSDVTDVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVTKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -