Pcor001228.1
Basic Information
- Insect
- Pandemis corylana
- Gene Symbol
- GATA-B
- Assembly
- GCA_949127965.1
- Location
- OX421850.1:19853198-19861230[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-18 1.3e-14 54.1 3.0 1 34 186 218 186 220 0.97 2 2 6.1e-18 1.6e-14 53.8 6.8 1 34 255 287 255 289 0.97
Sequence Information
- Coding Sequence
- ATGGACACGGCCGTGCGGGCGCGGCCAGCACGTGCTGCCGCGCGCTGCGGGCGACTCGTGCCGGCACCACCCATAGTCCTGTATTCTCTTCTAAGGGCGACACTGTTCTGCACTGAGGGTGGCGGCGGCAGCGTGTACGCGCGGTGTCCGTATACCAGCAGTTCACCCTACTTCGGGAACGGAGCTGAGCTCTCAACGCAGTCTCAGATCTGGAGCTCTAGTGCAGGCGGTTCACCCAGCTACGGTGGCTCGAGTGGGAGCGCAACAGGCGTGGTGCTTTCCGAAGAATACGGCGAGAGTCCGGGTGGAGGctccggcgccggcggcggctcCCCAGGTGCCACCGGTGGCTCATTGCCCGCCTTCAACACCCGCTTTGGAGGCCCCTACTCTTGTGCCACTTCTCGACCGTCCACTGTATACGGACCATCCACCTTGCCCAGCAACGCCTATGTCCACCAGGAGGTCTGGCTGGACGGCAGTCGGCGACAGTACTCGGCCGCCTCCAATCTGACAGCAATCGAGATGGCAGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGAGACGGCACCGGCCACTACCTCTGCAATGCTTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCCCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCCCCCGCCAACGACATGGGCACGAAGCGGCCGGGTATGTCATGCACGAACTGCCACACAACCATGACGTCGCTTTGGCGGCGCAACGCACACGGCGAGACCGTTTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAATATCAACCGTCCCATCGCCATGAAGAAGGACTCTATTCAGACAAGAAAACGGAAACCGAAAAACAGCCTGAAATCGGAACGAAACTTGAAGAGTTTGACACATAATTCACACTCTACAACCACGAAAATGCAAAATCTGTTGGACACAGGCGTGAGTATAGCGACGAGCACGGGCGAGACACGGTCGTCGCTGGCGCTAGGCTACTACGTACAACAGCAGCAGCTGAAGCTGGAGGAGCCGCCGCCAGCGCACGCGCATGCGGGCGCGCTGCAccacgcgcacacgcacgcgcaccaccaccacCAGCTCTACGACGACGAGTaccggcgcgccgccgctgaGTCCGCCGACCGCCTCGACCGTCCCACAGTCGTCTCCATAGGCAGCTGA
- Protein Sequence
- MDTAVRARPARAAARCGRLVPAPPIVLYSLLRATLFCTEGGGGSVYARCPYTSSSPYFGNGAELSTQSQIWSSSAGGSPSYGGSSGSATGVVLSEEYGESPGGGSGAGGGSPGATGGSLPAFNTRFGGPYSCATSRPSTVYGPSTLPSNAYVHQEVWLDGSRRQYSAASNLTAIEMAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHAMPAPANDMGTKRPGMSCTNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPIAMKKDSIQTRKRKPKNSLKSERNLKSLTHNSHSTTTKMQNLLDTGVSIATSTGETRSSLALGYYVQQQQLKLEEPPPAHAHAGALHHAHTHAHHHHQLYDDEYRRAAAESADRLDRPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773460;
- 90% Identity
- -
- 80% Identity
- -