Basic Information

Insect: Pandemis corylana
Gene Symbol: Znf574
Assembly: GCA_949127965.1
Location: OX421879.1:7242593-7247728[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.1e-05 0.002 19.1 3.3 1 23 520 542 520 542 0.97

2 18 1.8e-05 0.0012 19.8 3.1 1 23 562 584 562 584 0.98

3 18 0.0014 0.088 13.9 0.9 1 23 606 629 606 629 0.96

4 18 0.19 12 7.2 0.7 1 21 634 654 634 655 0.95

5 18 0.044 2.9 9.2 0.6 1 21 728 748 728 749 0.94

6 18 1.2e-06 7.7e-05 23.6 1.2 2 23 756 777 755 777 0.97

7 18 0.00021 0.013 16.5 0.5 1 23 783 806 783 806 0.96

8 18 7e-06 0.00045 21.1 1.6 1 23 812 834 812 834 0.98

9 18 1.2 76 4.7 2.6 1 11 843 853 843 865 0.76

10 18 7.2e-05 0.0047 18.0 0.6 1 23 871 893 871 893 0.97

11 18 0.00012 0.0076 17.3 0.9 1 23 899 921 899 921 0.98

12 18 2.9e-05 0.0019 19.2 2.5 1 23 927 949 927 949 0.98

13 18 2.5e-06 0.00016 22.5 3.3 1 23 955 977 955 977 0.98

14 18 0.036 2.4 9.4 3.4 1 23 983 1005 983 1005 0.97

15 18 0.00028 0.018 16.1 1.5 1 21 1011 1031 1011 1033 0.94

16 18 2e-06 0.00013 22.9 4.3 1 23 1039 1061 1039 1061 0.99

17 18 0.00035 0.022 15.8 4.4 1 23 1068 1090 1068 1090 0.98

18 18 0.0023 0.15 13.2 0.2 1 23 1096 1118 1096 1118 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.1e-05	0.002	19.1	3.3	1	23	520	542	520	542	0.97
2	18	1.8e-05	0.0012	19.8	3.1	1	23	562	584	562	584	0.98
3	18	0.0014	0.088	13.9	0.9	1	23	606	629	606	629	0.96
4	18	0.19	12	7.2	0.7	1	21	634	654	634	655	0.95
5	18	0.044	2.9	9.2	0.6	1	21	728	748	728	749	0.94
6	18	1.2e-06	7.7e-05	23.6	1.2	2	23	756	777	755	777	0.97
7	18	0.00021	0.013	16.5	0.5	1	23	783	806	783	806	0.96
8	18	7e-06	0.00045	21.1	1.6	1	23	812	834	812	834	0.98
9	18	1.2	76	4.7	2.6	1	11	843	853	843	865	0.76
10	18	7.2e-05	0.0047	18.0	0.6	1	23	871	893	871	893	0.97
11	18	0.00012	0.0076	17.3	0.9	1	23	899	921	899	921	0.98
12	18	2.9e-05	0.0019	19.2	2.5	1	23	927	949	927	949	0.98
13	18	2.5e-06	0.00016	22.5	3.3	1	23	955	977	955	977	0.98
14	18	0.036	2.4	9.4	3.4	1	23	983	1005	983	1005	0.97
15	18	0.00028	0.018	16.1	1.5	1	21	1011	1031	1011	1033	0.94
16	18	2e-06	0.00013	22.9	4.3	1	23	1039	1061	1039	1061	0.99
17	18	0.00035	0.022	15.8	4.4	1	23	1068	1090	1068	1090	0.98
18	18	0.0023	0.15	13.2	0.2	1	23	1096	1118	1096	1118	0.97

Sequence Information

Coding Sequence: ATGACTTCGGATTTGAGTGATTTGGTGAAAGAGGAGGCGGCGTGGGAGGCCGAGTACGTGGAGGCACTGTGGGCGGCGCTGTACGCGGGCCGTCAGGAGCTCCGGCCGGAGCCCGAGGGGGGCTCCGAGAGAAATGCGGCCGAAGACTTCGCGTTGTCAGCTTCAAGAGTATGGGCCGCAAACACCAGCCGCCTTCAAACCAAGACGAAAGCAACCGAAGCCGTACGAGACCCCAAAGATGCTATCACCACCCTCCCTGGACCTAAACCTACCATTACCACCATAACACCAAAGACAGAAACCGAACAGAGCACACCAGACATTTCTACCAGCCTTGAAGACTGGTGTATCAGTAGTACGCCCAAAACAGAAGTAGCACCAGTTAGCAATGTTCCTACTAACCACCCTAGCCTTAAAGATGCTACAGCTAGTATAGCGCCAGTGACAAAAGCAACACAGAGCTCAGCAGACATTACCAGCTCTGAAGACTGGTGTATTGGTAGTACGCCCAAGGCAGAAGTAGCAATAGTTTGTAATATTCCTACTGCCCACCCTAGCCTTAAACACACTACTGCCAATGTAACGACTACAATAAAAGTAATACAGAGCCCAGCAAATATTTCTACCACCTCTGAAGATACCAGCAATAGGAAAACGCCCAGGACAGAAGTAGCACCAGTTCTTGTCAATGCTTCTACTACCCACCCTGTAATTGAAGACACTACTGCCAATATTACGCCAAAGATAGAACCGGTAGGGACCCCTGGAGATACTAGTGGTATGCCCACAACAGAAGTAGCACCGGTTCTTAGCAATGTTCCTACTACCAACCCTAGCCTTAAAGACACTACTTCTAATATAACGCCATCGACAAAAGGAATACTGAGCCCTACAGACGTTATCAGCCTTAAAGGCACTAGTGCTAGTAATACGCCTAGAACACAAGTAGCACCCGCTCTTAGCAATGTTCCTACTACTCAGTCTAGTATCGACACTACTGCTAATATAACCCCAAAAATAGAACCAGTGTGGACCACTGGAAATACCAGTACTACTGATACACTTGGAACAGGAGTAGCACCGGTTCTTAGCAATGTTCCTACTACCCACCCTAGCCTTAAAGACACTACTGCTGATGCTGTAATACAGAGCCCTACAGACATTACCAGCCCTGAAGGGCTTAGTGCTAGTAGTACGCCTAGAACAGAAGTAGCACCACTTAGCAATGTTCTTACTACCCAGTCTAGTCTTGACACTACTGCTAATGTAACGCCAAAGATAGAACCAGTATGGAGCCCTGAAGGCACTAATACTACTAATACGTCTAGGACAGAAGTAGCAACAGCTCTTGGAAATGTTTCTACTGCTCACTCTACCCTTGAAGACCACAGTGGTAGTAATGCGCCTCGGTCAGAAGTAGCACAGAACACAGATGTTTTTGGCACTCAAACTAGTCAAGAATCTAGCGTTAGTAACAGACCTAGTTTTTACAATTATGATGCAAACTGTCTAAAACCCTGTTACATTAAGTTGGAACATGTTCCCTACAAGAATGCATTCATATGTCCGATATGCCAAAAGGTGTGCAGCTACAAACACAACCTTAGCAAGCATCTACTCGTTCATACTCAAGAAGAAATCAATACCATCAAAATTGAAAAGAAGGTTATGAAAAAAGGGAATTTCAACTGTCATATTTGTGGACAGGGATGTTCACGAAAAGAGGCGCTAACTAGACACCTGAAAATACACACAAGGGATCCTTTTTTGGAGCAAATACgtagaaaaaaacaatatgacATAAAGAAGACGTATTTTGAATGTGACGACTGCGGAATGAAGACATTGAGGAAGACCAGTCTGCAGAAGCATGTGCGGAGGCTCCATAGAGAGGGTAGCTTCGTATGCCAAGTTTGCAAGCAACAGTTCAGAGCAGCGTGCAAGCTTTTGGAACACATAAAGCTTGCAGCTTGCGAGCGAGCAAAAGAAACAGTTGGACAACAGTCTGACGAGGCTGTCTTCAAGCAAATGCTGAAATCCTGCTTTGTTAGACTTGAACGCGTTCATATTGAAAAAGGCAAAGCTGTAATGAAGATTGTTGATGAAACTGCGAACAGTGATAGTGAATATGACTATTCTGATGGGGGGGATGGTTCTGCTTTTCAAACTGATGAAGAGACATACTATTGCGGCGTTTGCGAGGAGCAGTTCGCATCATTTTCGTCTTTAAGTGACCATGTTTGCCGTCGCCTCAAGAAGCGGGTCTCGTGCGACATTTGCGGGAAGAGGTTCAGAAGGACCTCTCACTTAGTCGAACACCTTCGTATTCACTCAGGCGAGAAACCCTTTGCGTGTGACGTGTGTAAGAAGAGATTCCGGCTGAAACAACCCTTGCAAAAGCATATTATAACAGTGCATTTGCGTGGGATGGCTTACCCGTGCAAATTGTGTAATAAAGATTTTCGCAGCGCTTTCTCATTGCGGAAGCATGTTCGCAGTCACACGGGGGAGAAAGAAATGAAGCCGTATTCGTGTAAAGTGTGTAAGAAACGGTTCAGGTGCGACCGGGAGCGTGTGGAGCACGCCCGCGTCCACACCGGCGAGAGACCGTACGTCTGCAAAGTGTGCGGCAAGGGGTTCCGCGTGGAAGCCGATCTGAGGATCCATAATCGCCACCATACTGGAGACAAACCGTATTCGTGTGATGTGTGTAAGAGGAGGTTTCGTATTTGGCAGACGTTGAACGCTCACAAACGCGTTCACACAGGCGAGAGACCGTTCACATGTGACGTGTGCAAGAAATCGTTCAAACGGTATGACACATTGTCTACGCACAGCCGGATACACACAGGCGAGAAACCGTACGTGTGCAAATATTGCCCGAAGAAGTTCACACAGAATGGTCATTTGAAGTTACATTTGAAgttacacacaggtgagaaaaaTTTCATTTGTACGGTGTGTGATAAAAGGTTTTTCGAAAGATGCAGGTTGACGGAACACAGCCGTATCCACACTAAAGAGAAGCCTTATGCGTGCGATGTCTGTGACAAAACCTTTAGAACCGGTGCGAACCTGACAATCCATAAACGTTGTCACAcgggtgagaaaccgtacgagTGTAAAGTGTGCAAGAAGTCGTGCTCACAGGCGACGAACTTGAGGACGCATATGAAGACGCACGGTAGGAAGAGCCAGCCGTTCAGCTGTCACGTTTGCGAGAAGAGATTCCAGAGCCGCAAGAATTTGGATAAACATTTGAAGTTGCACGATGCGCGTGCGCCGCATATGTGTGACGTGTGCGGGGCGAGGTTCACGAGCGACAGCGTGCTGAGTGCACACGTTCTCACACACTCTGGATGTGATTGA
Protein Sequence: MTSDLSDLVKEEAAWEAEYVEALWAALYAGRQELRPEPEGGSERNAAEDFALSASRVWAANTSRLQTKTKATEAVRDPKDAITTLPGPKPTITTITPKTETEQSTPDISTSLEDWCISSTPKTEVAPVSNVPTNHPSLKDATASIAPVTKATQSSADITSSEDWCIGSTPKAEVAIVCNIPTAHPSLKHTTANVTTTIKVIQSPANISTTSEDTSNRKTPRTEVAPVLVNASTTHPVIEDTTANITPKIEPVGTPGDTSGMPTTEVAPVLSNVPTTNPSLKDTTSNITPSTKGILSPTDVISLKGTSASNTPRTQVAPALSNVPTTQSSIDTTANITPKIEPVWTTGNTSTTDTLGTGVAPVLSNVPTTHPSLKDTTADAVIQSPTDITSPEGLSASSTPRTEVAPLSNVLTTQSSLDTTANVTPKIEPVWSPEGTNTTNTSRTEVATALGNVSTAHSTLEDHSGSNAPRSEVAQNTDVFGTQTSQESSVSNRPSFYNYDANCLKPCYIKLEHVPYKNAFICPICQKVCSYKHNLSKHLLVHTQEEINTIKIEKKVMKKGNFNCHICGQGCSRKEALTRHLKIHTRDPFLEQIRRKKQYDIKKTYFECDDCGMKTLRKTSLQKHVRRLHREGSFVCQVCKQQFRAACKLLEHIKLAACERAKETVGQQSDEAVFKQMLKSCFVRLERVHIEKGKAVMKIVDETANSDSEYDYSDGGDGSAFQTDEETYYCGVCEEQFASFSSLSDHVCRRLKKRVSCDICGKRFRRTSHLVEHLRIHSGEKPFACDVCKKRFRLKQPLQKHIITVHLRGMAYPCKLCNKDFRSAFSLRKHVRSHTGEKEMKPYSCKVCKKRFRCDRERVEHARVHTGERPYVCKVCGKGFRVEADLRIHNRHHTGDKPYSCDVCKRRFRIWQTLNAHKRVHTGERPFTCDVCKKSFKRYDTLSTHSRIHTGEKPYVCKYCPKKFTQNGHLKLHLKLHTGEKNFICTVCDKRFFERCRLTEHSRIHTKEKPYACDVCDKTFRTGANLTIHKRCHTGEKPYECKVCKKSCSQATNLRTHMKTHGRKSQPFSCHVCEKRFQSRKNLDKHLKLHDARAPHMCDVCGARFTSDSVLSAHVLTHSGCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -