Pcor002038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pandemis corylana
Gene Symbol
JARID2
Assembly
GCA_949127965.1
Location
OX421850.1:34617757-34678261[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-14 5.4e-11 43.4 0.0 6 88 754 833 750 834 0.92

Sequence Information

Coding Sequence
ATGCGGCTCGTGCAGCGCAAGTTCGCGCAGGGCGTGCCGCTCCCGCCGAGCGCGAGCTTGCCGCCGCCCGCCCCCGAGCGCAAGGTTGAGCAGAGCTCCAAGGTCTACAACAATGGCATGTCAGCGAGCAGTCTGCTCGACATCGTTGCATTGCAAAACGTTCACAGACACAAGCAGCCGATGGTGGTTCTGGAGAGGCTCAGAGACCACGAGATACCGGCGGTGGCTCTCGCAGTGCCTGCTAGGAAGAGGGGGCCAAAGCCGAAAAAGAATATGTGCCTCCGGCGAGAGGTGACGCCAAAGATCACCAGCCCCAGAAAAAGGAAACCGTCAGTGGTGACAAAGGGTCCAACAAAGAAGCGTCGGTGCGCCAACAGAGAAGTGTCAGTGTCAGAGGACGATGTTCCTCTGCTGTACCTCACCAGTGCCAAAGAAACTCCAACAGAGGAAGCGCCTTTCGCGTTCAAAAGCCCGTCGACATGTCCAGTGCgccgcaaaataaaaaagaacgcCAGGAGGATTTCTTTCCTCGCAGGTCGTGCGTTGCCCAGTCCGTTGCCAAGCCCGGTGCCATGTGTGACCATAGTCCGGCGTTCGACGCGCAGCACCGGCGCCTCCGTGACGCCCTTCCCCGCCGTCCGCGCTTCACGCCGGCTACGAAAACGCCAGAATTCAGtgaaaccGAATCGCAAACTGCTGGTCCCTGCGCGAAAAGAAAGTGCCGtgaaaccGAATCGCAAACTGCTGGTCCCTGCGCGAAAAGAAAGTGCCGtgaaaccGAATCGCAAACTGCTGGTCCCTGCGCGAAAAGAAAGTGCCGATCGACCGCTGCCGTCGAGGCGTTTAAACACAGCCACGGAGAGCACTGAAACGGCATCAACTGCTACAACGGCGCCAGCTGCTACAACGTCAGCAACAACTGCAACGGCAATAGCCGCTTCAACGGCAACTGatcaAACACTTCGCCCAAAGCGTGTGAGCGCAAGCACGGAGACAACTGAAACAACAGCTACAGCTGCAACTGCAATAGCTGCTGCAACGGCAGTGGCTGCTACAACGGCGGTGGCTGCTACAACGGCGATAGCTGCTACAACGGCGATAGCTGCTACAACGGCGGTGGCTGCTACAACGGCGATAGTTGCTACAACGGCGGTGGCTGCTACAACGGCGATAGCTGCTACAACGGCGATAGCTGCTACAGCGGCGGAAGCTGCCAGAACGATAGTAACAACCGAAATGGAGCAAGAAGGCATGCAGCTGCCTCACACCGAACCGCAACCGTCTACTTCGAGCCACTACGACACTGTGCAGAACGTGGCCGTGGAGCCGTGCACGTCGAACCGCTACAACACTGTGCAAGACGTGGTGGTCGCGTCCAACGCCAAATGCCAGCGCTTGGCGGCGCGCTGCCGCAACTGTCGCGGGTGTTGCATAGTGGCGAAGATCATGAAGCTCACAAAGCTCGTCTGCAATGGGatgcaGCCGGACTGCATATCAGCCAGGGACGTGTACGACTTCAACGCGGAGATAGTAGAGGCCATCACGCCGTCTCTTTCCTGCATGCGCAACAAGAACCGCCGGGCGCGTGCTACAGAAGAGGAGAGCAATCTTTTTATGGATGTGCTGCCAGAGAACAGCCCTCGCGTCATTCAGATAACGCTCAAACGCACCGGCGAGAGCCAGTGCATCTCGAAAGCCTGCATCGTCAACCGCGACGTGATGTCGAACACTCGACAACCGAGCCTGATAGAGCACGAGAACCTTCTCGACCGGCTGCTGGAGTGCCTCTCGACTGTGGCCCAGGTGAAGAATGAGCCGTTGGCGTCTACCAGTGGGCAAGAGTCCGTGGAGCCGCCTGACCCCATCCTGCCTGCGCTGAGATCTTGCTCCGTCAATCTTGGGATGGAGTTCCAGCAGTCGTTCCAGCAGTCGGTCGAGCAGTTGGCCAGGCAGTCGGCCGAGCAGTCGATCGAGCAGTCGGTCGACCCCAGCGTGGACAATGACTTGTCGCAGTGTCCGGTGCCCGAGTCCGGGCAGGTGCTTGAAGCGCCAATCTATTACCCAACTCTCGAAGAATTCACGGACCCGATGGCGTACTACGAAAAAATCGCCCCGACTGCCTCCAAATTCGGCTTATGCAAGATAGTGGCGCCCTCCGGCTTCGCCCCGCCCTGCGTGATAGACGAGCATTTCCGTTTCGCGGTCATATACCAGTACATATGGAAGCTGTACAACCGCTGGGGGCCGGCGTCGCGCGAGATGGCCGCCATCAAGGCTCACATGAGGACACAGAGCGTCGCGTTCGCTCGCTCGCCGCTGTTGGATGGTAGCGAAGTTAACCTGCCGAAGCTGCACCACACGGTGCTGCGCATCGGCGGCCCCTCCAACCTTCTATTGGAGAAACGCTGGGGGAAAGTAGCTGAGGAGATGAAGCTGACGAAGCTCCAGAACCCGGACAGGAAGCTCGACCACGTCTTCGTGCGGTACCTGCTGCCCTACACGGTGCTCTCCAACCAGGAGCGTCAAAAGAAAATGGTCGAAGTCGAGAAATGGTGGACCATCAGGTACCAGAAGATGTTGGAGAGGGCTCGCAACCCGTTCCACAGGCAGAAGCGGCTGCTCGGCGAGTCGGACTCTTCGGAGGACGAGATTGAGGACAACGACACCAACCGTGCCCTCGACGAAGCCGAAGACTGCATCGTGCAGGGGAGGACAATGAACCTCGCCACATTCACCAAGATCGCCACAACCCTCATGGATACGCAATTCGAGGCCGGCTCGGCGCCCACAGCGGCCGCGGTGGAGACTGCCTACTGGCGCGCCGTCCTACACGGCACCGAGCATATAGTTGCCAACACGGCATCCATTGACACCGGCGAGGAGGGCTACGGCTTCCCCAAGGACCCGGACGTCGAGTACGGCGACCACCCGTGGAACCTCAAGAGGCTGAGCCAGAACCCGAACAACGTGCTCCGCTACCTCGGCCCAGTTTTGGGCGTGACTGTGCCCACTCTCCACTTGAGTATGCTCTTCAGCACATCCTGCTGGCACCGCGACCCCCACGGCCTGCCCTGGACGGAGTACATGCACAGCGGCCCCGAAAAGATATGGTATGGTATACCGGCAAGCCAGAGCGCCAACTTCCGGCGAGCAGTCGAAACCCTCTGCCCGGCCTACTGCCAGAACAAGTCCATATGGCTAGCCTCGGACATAGCGATGATACCGCCCGAAATACTATCCCAGCACAACGTGACCCTCTCCCGGGTCACGCAGAAGCCGGGCGAGTACATCATGGTGTTCCCAGAGGCTCACTCCTGCTCGATAACCACGGGGTATTCAGTGTCGGAGAGCGTTTACTTCGCGTCCAACTCTTGGCTGGATAATGTCTACAAGCTGTTCCAGGAACTTAGGAACAGCTGCGAGCCAACTATGTTCGCGCTGGAGCAACTCCTCATGGACCACGAGTGCCAGCAGACGGAGCCGGGGCGAGTGCTGCCCACTGTGCTAGCCGCGCTCGTGAACAAGGAGCTCTCCCACCGCGCTATACTCGAGAGGAAGGGCCTGCAGCTCGTCGTACAGATGGTATGCGAGTTGGACGAAGAGTCGCAATTTCAAGCGTGGACGGCGCGCAACCAGGACGAGTGCGAGTTTTGCCGCTCGACGCTCTATTTTTCAAAGATAATCGGGCTGGCGGGCAGGAAGTCCCTGGTGTGCCCCGAGCACGCCATCCGTATGCTGAACACGAACAAGTACCGCGACGTGAACGTGAAGACGCTCGACTTCGTCACGCGGTACCACACCTCCAAGCTCCAAGAGTTGTCGAACAAGCTGGAGGACCTGAACCGTGAAACGATCATAGTTGATTAA
Protein Sequence
MRLVQRKFAQGVPLPPSASLPPPAPERKVEQSSKVYNNGMSASSLLDIVALQNVHRHKQPMVVLERLRDHEIPAVALAVPARKRGPKPKKNMCLRREVTPKITSPRKRKPSVVTKGPTKKRRCANREVSVSEDDVPLLYLTSAKETPTEEAPFAFKSPSTCPVRRKIKKNARRISFLAGRALPSPLPSPVPCVTIVRRSTRSTGASVTPFPAVRASRRLRKRQNSVKPNRKLLVPARKESAVKPNRKLLVPARKESAVKPNRKLLVPARKESADRPLPSRRLNTATESTETASTATTAPAATTSATTATAIAASTATDQTLRPKRVSASTETTETTATAATAIAAATAVAATTAVAATTAIAATTAIAATTAVAATTAIVATTAVAATTAIAATTAIAATAAEAARTIVTTEMEQEGMQLPHTEPQPSTSSHYDTVQNVAVEPCTSNRYNTVQDVVVASNAKCQRLAARCRNCRGCCIVAKIMKLTKLVCNGMQPDCISARDVYDFNAEIVEAITPSLSCMRNKNRRARATEEESNLFMDVLPENSPRVIQITLKRTGESQCISKACIVNRDVMSNTRQPSLIEHENLLDRLLECLSTVAQVKNEPLASTSGQESVEPPDPILPALRSCSVNLGMEFQQSFQQSVEQLARQSAEQSIEQSVDPSVDNDLSQCPVPESGQVLEAPIYYPTLEEFTDPMAYYEKIAPTASKFGLCKIVAPSGFAPPCVIDEHFRFAVIYQYIWKLYNRWGPASREMAAIKAHMRTQSVAFARSPLLDGSEVNLPKLHHTVLRIGGPSNLLLEKRWGKVAEEMKLTKLQNPDRKLDHVFVRYLLPYTVLSNQERQKKMVEVEKWWTIRYQKMLERARNPFHRQKRLLGESDSSEDEIEDNDTNRALDEAEDCIVQGRTMNLATFTKIATTLMDTQFEAGSAPTAAAVETAYWRAVLHGTEHIVANTASIDTGEEGYGFPKDPDVEYGDHPWNLKRLSQNPNNVLRYLGPVLGVTVPTLHLSMLFSTSCWHRDPHGLPWTEYMHSGPEKIWYGIPASQSANFRRAVETLCPAYCQNKSIWLASDIAMIPPEILSQHNVTLSRVTQKPGEYIMVFPEAHSCSITTGYSVSESVYFASNSWLDNVYKLFQELRNSCEPTMFALEQLLMDHECQQTEPGRVLPTVLAALVNKELSHRAILERKGLQLVVQMVCELDEESQFQAWTARNQDECEFCRSTLYFSKIIGLAGRKSLVCPEHAIRMLNTNKYRDVNVKTLDFVTRYHTSKLQELSNKLEDLNRETIIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-