Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00061 3.8 8.6 0.1 14 31 11 27 10 30 0.89

2 7 0.00061 3.8 8.6 0.1 14 31 43 59 42 62 0.89

3 7 0.0035 22 6.2 0.0 14 31 75 91 74 94 0.84

4 7 0.023 1.5e+02 3.5 0.1 21 31 113 123 106 126 0.84

5 7 0.00061 3.8 8.6 0.1 14 31 139 155 138 158 0.89

6 7 0.0004 2.5 9.2 0.1 14 32 171 188 170 192 0.87

7 7 3.8 2.4e+04 -3.5 0.5 1 9 211 219 211 221 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00061	3.8	8.6	0.1	14	31	11	27	10	30	0.89
2	7	0.00061	3.8	8.6	0.1	14	31	43	59	42	62	0.89
3	7	0.0035	22	6.2	0.0	14	31	75	91	74	94	0.84
4	7	0.023	1.5e+02	3.5	0.1	21	31	113	123	106	126	0.84
5	7	0.00061	3.8	8.6	0.1	14	31	139	155	138	158	0.89
6	7	0.0004	2.5	9.2	0.1	14	32	171	188	170	192	0.87
7	7	3.8	2.4e+04	-3.5	0.5	1	9	211	219	211	221	0.72

Coding Sequence: ATGAACAACATCCACGAGGGCAAGAAGAACAGAGAGCCGGAGGGAGAGCATCTGTGCGAGGTCTGCGGGAAATCATACAAGATCATGGTGGCGCACATGAACAACATCCACGAGGGCAAGAAGAACAGAGAGCCGGAGGGAGAGCATCTATGCGAGGTCTGCGGGAAGTCATACAAGATCATGGTGGCGCACATGAACAACATCCACGAGGGCAAGAAGAACAGAGAGCCGGAGGGAGTGCATCTGTGCGAGGTCTGTGGGAAATCATACAAGATCATGGTGGCGCACATGAACAACATCCACGATGGCAAGAAGAACAGAGAGCTGGAGAGAGAGCATCTGTGCGAGGTCTGCGGGAAATCATACAAGATCATGGTGGCGCACATGAACAACATCCACGAGGGCAAGAAGAACAGAGAGCCGGAGGGAGAGCATCTGTGCGAGGTCTGCGGGAAGTCATACAAGATCATGGTGGCACACATGAACAACATCCACGAGGGCAAGAAGAACAGGGAGCCGGAGGGAGAGCATCTTTGCGAGGTCTGCGGGAAGTCATACAAGACGGTGAAAAGGCTGAAGGGCCACGTGTGGGCGATGCACACGAACCGCTCCACCACCAAGAGCTTCAAGTGCAAGCTGTGCCCGGCCACCTTCACGTGGCAGACCTCCATCTACAAGCACGTCAAGATGATGCACCAGAAACCGCCTATAAAGATCCGGACCCTGCCGGCCAAGAAGCAGGAGTTCCCGAACGCCGAGCTTATCGCCCGCGAGTACTTTCAACCAACCAACGGCCTCGCTCACATCCCGATACACAATATAGTGCAAAACATCGTATAG
Protein Sequence: MNNIHEGKKNREPEGEHLCEVCGKSYKIMVAHMNNIHEGKKNREPEGEHLCEVCGKSYKIMVAHMNNIHEGKKNREPEGVHLCEVCGKSYKIMVAHMNNIHDGKKNRELEREHLCEVCGKSYKIMVAHMNNIHEGKKNREPEGEHLCEVCGKSYKIMVAHMNNIHEGKKNREPEGEHLCEVCGKSYKTVKRLKGHVWAMHTNRSTTKSFKCKLCPATFTWQTSIYKHVKMMHQKPPIKIRTLPAKKQEFPNAELIAREYFQPTNGLAHIPIHNIVQNIV

Sequence clustering based on sequence similarity using MMseqs2