Basic Information

Insect: Pammene aurita
Gene Symbol: THAP3
Assembly: GCA_947086415.1
Location: OX352311.1:13776947-13821469[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5.2 5.7e+02 2.7 0.4 1 10 409 418 409 431 0.72

2 10 0.036 4 9.5 0.7 1 23 438 461 438 461 0.93

3 10 0.56 63 5.7 0.2 1 23 465 487 465 487 0.92

4 10 0.0062 0.69 11.9 1.0 1 23 492 515 492 515 0.98

5 10 0.0041 0.46 12.5 0.7 1 23 519 542 519 542 0.96

6 10 0.31 35 6.5 0.2 3 23 631 652 630 652 0.96

7 10 0.014 1.5 10.8 0.5 2 20 668 686 667 689 0.92

8 10 8.2e-06 0.00091 21.0 2.5 1 23 695 717 695 717 0.99

9 10 0.00035 0.039 15.8 2.8 1 23 724 746 724 746 0.98

10 10 5.3e-05 0.0059 18.4 2.2 1 23 752 775 752 775 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5.2	5.7e+02	2.7	0.4	1	10	409	418	409	431	0.72
2	10	0.036	4	9.5	0.7	1	23	438	461	438	461	0.93
3	10	0.56	63	5.7	0.2	1	23	465	487	465	487	0.92
4	10	0.0062	0.69	11.9	1.0	1	23	492	515	492	515	0.98
5	10	0.0041	0.46	12.5	0.7	1	23	519	542	519	542	0.96
6	10	0.31	35	6.5	0.2	3	23	631	652	630	652	0.96
7	10	0.014	1.5	10.8	0.5	2	20	668	686	667	689	0.92
8	10	8.2e-06	0.00091	21.0	2.5	1	23	695	717	695	717	0.99
9	10	0.00035	0.039	15.8	2.8	1	23	724	746	724	746	0.98
10	10	5.3e-05	0.0059	18.4	2.2	1	23	752	775	752	775	0.95

Sequence Information

Coding Sequence: ATGCGGTGCAGTGTGCAAAATTGTATCAACGATACTAAACGAACAACCAAAAGCCATGGGATTACATTTCACTTGTTTCCCAAAGAGCCAAATCTTCGAAGTGCCTGGATGGAGGCCCTGGGCATGTCAGACTGGGAGCCGAAAGACCGTAGCACAATATGCTCAGAACACTTCCGGAATGATGACTTTTATGAGACCAGATGCGGATTGCGGAAGATCAAGAATGGAGCTGTGCCCGTGTCAGCACAGGATTTGGCTAATGATCTGGATGCTCCAGCTGCTTTAAGGGTGTGGTGGCTGGCGCTGCCGCACGCGGTGCTGGGAGGCGGGCTGGGACCCAAAAACAATGATGACTTATTGTATTGTAGTACGGGCAGGTTTCCGCAACTCGACGTGTGCAGGATATGCCTGGCCACAGACAGCAAGATGTTGAACATCCGTGATCATAAACTGGAGCAGGCATTCACAGAAGTCAGCGGGATGACAATGGGTGAAGAAGATAAGTTGCCTCAGCGTTTATGCTGGGAGTGTGGCCATAGACTATTGACAGCTGCGCGGTTCAGGAGCAAAGTTCTTAGGACCCATGACTTGCTTACTGGTCTACCCCACGCTAGCCCATACATCACAATACGCGATATCCGTTCAATAAATCGCCGTCAAAACCATCTAAGATCTCACCTGACATACAAACATTATGACCCTAACGAATTCTACATACACATTAACGACGATGAAGTTATCGTCAAATCTGAAAAAGATAATGAAGAATTAGAAGAAAAAGTACCGCCTACAATCGAAGTAGAAATAATTAAAGACGAAAAGAATAATACGGAGTTCTTTTATCAAGAATTCGATAATTATAATGATGATATCGTCGATAATGGAAATAATGAAGATTGTAATAATGATACAAGTTTTAATGATGTAGGTAATAATGATTTGAATGAAGATAGTGACGATAAAGTTTTAAGTGAAGTGTATGTGAAGAAGAAACGGAAAGTGAAGAAGGTGAAAGTGAAGAAGAAGGAGAAGGTAGTCAGGAAGAAGGAGGAGGAGGATAATCCGATGACCACTATGGATAAGTACAAAAACTCTGACGTAAAACGGCGCAAGACCACAGACGGACTCGACGAATCTCTCTTCACTATAACAACGCTCAGCTACGACGAGCAAATAGCAGAGATACAGAAGAGACAAGAGAGCACCAACTACAAGAGCGCGCCTTACAAATGTAGCGTGTGTTATAGAGGGTTCCTTGTGCGGGACCGGTATGACGCGCACGTCGTGAGGCACAGTGAGCAATCCGGTGCGTACGAGTGTTTCATATGCAAGAGTCGCCTCAAAAGTGCGCGGGCGCTCCGGAAGCATCTCACTGCGCAACACACGGAGAAATTCAGCTGTAAAGGCTGCCCGTTCGTCACCAGGAACAGAGGAGTTGCGCGGGAGCACGAAAAGTGGCACGCCGGCACGAAGTACCAGTGTCCACACTGCCCGAGCGAATTCGACAAACTGACGACGTACATGGGCCACATCAGGATAAAGCACGTGTCGGATTTCGTGTGCGAGCTGTGCGGGTACACCTTCGTCAGTAAGAAGGGCATCGACGTTCACAAGAAGAAGAAACACCGGCTCGCTGATAAAACGGTTGAACTAGAAGGCCCATACTGCGAGACCTGCGAAGTCCGTTTTGTGTCAGAAGAGGCACACGCGCGACATCTCAAGTTATCATCGCGACATAGTAGCGACAACGATCCGAATCGCATCCGCAACGACTCGCAGAGCATAAACGCCGAGAAGAACGGGCGAGTGGTGAGGAGGGTGGAGCGGCGCCCGCTCGTGCACGCGCGCGACGGCGAGCGGGAGGACGCCGCGCCCGCCGGGCCTGTCGCCTGCGAACAGTGTGGCATCCAACTGCGTGACTTACGCCTATACGCGCAACACTTCCGCCGCGCGCACCCCGACAAGAATCGAACCAAGTACCCCGCCATGAAGACCCCGTGTATGTGTGAGCAGTGCGGACGCATCTTCCAGAGTATGGCCCTTTTAAAAGACCACATGTGGGTGCATACGGGCGAGAAGCGATTCAAGTGCGACCGCTGCGACAAGAGCTTCACCCAGAAGACGAACCTGGTGTTCCACATGAGGGTCCACAGCGCCACGCGGCCGAGCTACGAGTGCCCGCTGTGTGGGAAGCATTTCGCGTTCTTCAACAACCGAAGGAGGCATATGTTTATCCACACCGGCCTAAAACCGTTCAAATGCGAAACCTGCGGCAAATGTTTCACGACAGCCGGCGAGCAGCGCGCGCATATCGAACACGTGCACCTGAAGAAGCCGTGGCCGAAACGTCAGAGGCACAGGGAGGCTGAGCCCGCGCCGTGGCAGAAGTGTCTGGACCCTATGGAAGACTAG
Protein Sequence: MRCSVQNCINDTKRTTKSHGITFHLFPKEPNLRSAWMEALGMSDWEPKDRSTICSEHFRNDDFYETRCGLRKIKNGAVPVSAQDLANDLDAPAALRVWWLALPHAVLGGGLGPKNNDDLLYCSTGRFPQLDVCRICLATDSKMLNIRDHKLEQAFTEVSGMTMGEEDKLPQRLCWECGHRLLTAARFRSKVLRTHDLLTGLPHASPYITIRDIRSINRRQNHLRSHLTYKHYDPNEFYIHINDDEVIVKSEKDNEELEEKVPPTIEVEIIKDEKNNTEFFYQEFDNYNDDIVDNGNNEDCNNDTSFNDVGNNDLNEDSDDKVLSEVYVKKKRKVKKVKVKKKEKVVRKKEEEDNPMTTMDKYKNSDVKRRKTTDGLDESLFTITTLSYDEQIAEIQKRQESTNYKSAPYKCSVCYRGFLVRDRYDAHVVRHSEQSGAYECFICKSRLKSARALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKTVELEGPYCETCEVRFVSEEAHARHLKLSSRHSSDNDPNRIRNDSQSINAEKNGRVVRRVERRPLVHARDGEREDAAPAGPVACEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTAGEQRAHIEHVHLKKPWPKRQRHREAEPAPWQKCLDPMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325875;
90% Identity: iTF_01133791;
80% Identity: iTF_01133791;