Basic Information

Insect: Pammene aurita
Gene Symbol: Znf784
Assembly: GCA_947086415.1
Location: OX352311.1:1443024-1480059[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00053 0.059 15.3 0.7 1 23 294 316 294 316 0.98

2 11 0.041 4.5 9.3 5.3 1 23 323 345 323 345 0.96

3 11 0.086 9.6 8.3 2.0 1 23 349 371 349 371 0.97

4 11 0.0028 0.31 13.0 2.0 1 23 376 399 376 399 0.96

5 11 0.29 32 6.6 0.6 1 23 404 427 404 427 0.95

6 11 0.039 4.4 9.4 0.1 2 20 436 454 435 455 0.93

7 11 0.002 0.23 13.4 0.1 3 23 467 487 466 488 0.95

8 11 0.0022 0.25 13.3 0.6 6 23 504 522 492 522 0.95

9 11 0.00036 0.04 15.8 0.5 1 23 626 648 626 648 0.96

10 11 0.0014 0.16 13.9 0.7 1 23 654 677 654 677 0.92

11 11 0.00059 0.066 15.1 1.5 2 23 685 707 684 707 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00053	0.059	15.3	0.7	1	23	294	316	294	316	0.98
2	11	0.041	4.5	9.3	5.3	1	23	323	345	323	345	0.96
3	11	0.086	9.6	8.3	2.0	1	23	349	371	349	371	0.97
4	11	0.0028	0.31	13.0	2.0	1	23	376	399	376	399	0.96
5	11	0.29	32	6.6	0.6	1	23	404	427	404	427	0.95
6	11	0.039	4.4	9.4	0.1	2	20	436	454	435	455	0.93
7	11	0.002	0.23	13.4	0.1	3	23	467	487	466	488	0.95
8	11	0.0022	0.25	13.3	0.6	6	23	504	522	492	522	0.95
9	11	0.00036	0.04	15.8	0.5	1	23	626	648	626	648	0.96
10	11	0.0014	0.16	13.9	0.7	1	23	654	677	654	677	0.92
11	11	0.00059	0.066	15.1	1.5	2	23	685	707	684	707	0.97

Sequence Information

Coding Sequence: ATGGATACCACTACAAGAGTGCATTTGGTTTCCGAGGACCTGAGCGCGTGCCGCGTGTGCTTGGCCACTAACACTAAGTTGTACAGCATTCCTGATGGTCTAGAAGCGCATTTTATACAGCTGATGGGTGAAGAATACTCAGATGATGATGGGTTGCCACAGCACCTGTGCCCGTACTGCCGTTCACAGCTCCTGAGGTTTTCTGATCTCCGCACCCGCTGCCAACGCTCACAGGCCCTGCTTAGACAGTTGCTTAAACAGCTGACCTTTCTTTCCACTGATGACATACTCTCAATAGACAGAAATCACCACAAACTAGCCTTGAACTTGGTTACACTTAATGTGTACTCATTCAGCTCTCTAGACAAAAAGACCAACAGTAACACTAAGCCTGATGAGACTGGCCACGACTCATTTGATGACAGAGAGGAACTTGAAACAGAAATAGAAATTAAAGACGAACCTACAGATCCTTTAACAAGTGTTCCTAACATTATTGAAGATTCAGTCAAGCTAAATACTAATAATAAAACACCTAAGCAATTAGTTGTAGAAATCGACGGCTTGAACTTAGGACAAATCTCCGTAAAAAACTTAGAAGCAGTGAATGACACCAAAAAGAAATCTAAAAAGGATAAAGAAGTGAAAACGAAAAGGATATCGAATCTACTTCGTTTTGTAGCCGGGAAGAAAAGAAATGCTAAGCCGTTAACAAAATGGCAGCTACAATTGAGACGAGCTGAGAATAACTTTTTGCCGAACTTTGACCATGCGGAGTTCGAGTCGAAGCATGATTGTAAACTGAAGATATTGACGATAGAGGAACAGTTAGAAGAGATAGAGGAGAGGAAGCAGAGTAGTAATTATCTGAATTTGGATTATAAGTGCGAGCAGTGCGGGCGTGGGTTTGAGTTCGAGCAGCCGTTTAAGAATCACATGGCGAAGCATGATCCGAACATCGGGCCGTTCGAGTGCGACGTGTGCCACATATTCTTCCGCACGCAGTACCTGCGCCACCGCCACCTCGACTACCACAAGATGCTGTTCCGCTGCAACCTGTGCGGGTTCGTCACGCGCGCCAAGCATTTGGCACGGAACCACTACCTCATGCATACTGGAAAGGTGTTCAAATGCAAGCAGTGTGACGCCACTTTCACGAAAAGCACCTCGTACTACGGGCACGTGCGTCTCAACCATCCGTCGAAGGACCACGTGTGCGGGGTCTGCGGGGACTCCTTCATCGGAGCCCTGGGGCTCCGCCACCACCACGCGAAGGCACACAAAGAGCTATCGAAGTCCAAATTATCTTGCGAATCGTGCGGGGTGCAGTTCGCGAGCTCCGAAGCTTTTAACAGACACACGGACGGACGGACGCAGTGCGATGCGTCCTTGAAGGCGTGTCCGTCGTGCGGCGACACGTTCGAGACGGCGGAGGCGCTCGCGGCGCACGCGCGCACGCACCACGACTTCTGCTGCGAGGAGGTTGGAAACATTCACTTGAACATACTCTGCGACCAAACGTTCGTGAGCCAGAGCTCTTTAGAGACGCACCACCAGCGCATACACCTGCGCATCAAGTGGCCGGCGTACGGACGGACGCGCGAGATGAACAAGGAGTACTATAGAAAGATTAAAGAAAGGACCCGACTCCGAGCGCAGGTCGTCTGTGAAATATGCGGAGCTAAACTCATGAATGGCCGCCATTGCACCGCCACCATGGCCAACTCTCGCGTGCCGGCGGTCGCGCGGGCGCGTGTCGGGCTGTCGGCGGATCCCCGGGAGGGTGCAGATAATAATAATGTTTTGTCTCAGTCTAACGCAGCACTGGAGCGGCACCAGCAGGGGCAGTGCAAGCGAGAGAAAAGCACCAAGTCGTACCAGTGCCCCTCTTGCGGCAAGGCGTGCGCAACGCGACAAGGACTGCAACTGCACGTGACCTTGCACACGGGGGAGAAGCCGCACAAGTGCTCCGCGTGCCCGCAGGAGTTCCGGCAGGCGGGCGCGCTCAAGCGGCACCACGCGGCGGTGCACCTCGGCATCGACACGCGCGTGCAGTGCGCGCACTGCGGGAAGTACTTCTCCACCCTCTCCACCCGCAAGCTGCACGTCAACACCGTGCATCTGCGTCTCCCGCCGCCGCCGCCGAAGCGACGCAGGCACAAGGACTGA
Protein Sequence: MDTTTRVHLVSEDLSACRVCLATNTKLYSIPDGLEAHFIQLMGEEYSDDDGLPQHLCPYCRSQLLRFSDLRTRCQRSQALLRQLLKQLTFLSTDDILSIDRNHHKLALNLVTLNVYSFSSLDKKTNSNTKPDETGHDSFDDREELETEIEIKDEPTDPLTSVPNIIEDSVKLNTNNKTPKQLVVEIDGLNLGQISVKNLEAVNDTKKKSKKDKEVKTKRISNLLRFVAGKKRNAKPLTKWQLQLRRAENNFLPNFDHAEFESKHDCKLKILTIEEQLEEIEERKQSSNYLNLDYKCEQCGRGFEFEQPFKNHMAKHDPNIGPFECDVCHIFFRTQYLRHRHLDYHKMLFRCNLCGFVTRAKHLARNHYLMHTGKVFKCKQCDATFTKSTSYYGHVRLNHPSKDHVCGVCGDSFIGALGLRHHHAKAHKELSKSKLSCESCGVQFASSEAFNRHTDGRTQCDASLKACPSCGDTFETAEALAAHARTHHDFCCEEVGNIHLNILCDQTFVSQSSLETHHQRIHLRIKWPAYGRTREMNKEYYRKIKERTRLRAQVVCEICGAKLMNGRHCTATMANSRVPAVARARVGLSADPREGADNNNVLSQSNAALERHQQGQCKREKSTKSYQCPSCGKACATRQGLQLHVTLHTGEKPHKCSACPQEFRQAGALKRHHAAVHLGIDTRVQCAHCGKYFSTLSTRKLHVNTVHLRLPPPPPKRRRHKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -