Basic Information

Insect: Pammene aurita
Gene Symbol: -
Assembly: GCA_947086415.1
Location: OX352314.1:17887194-17937233[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.044 4.9 9.2 2.9 1 23 434 456 434 456 0.95

2 17 0.00021 0.024 16.5 1.9 1 23 469 491 469 491 0.97

3 17 0.013 1.5 10.9 9.3 1 23 497 519 497 519 0.99

4 17 7.6e-05 0.0085 17.9 6.6 1 23 526 548 526 548 0.99

5 17 4.9e-05 0.0054 18.5 0.2 1 23 554 576 554 576 0.93

6 17 4.2e-06 0.00047 21.9 0.1 1 23 582 604 582 604 0.98

7 17 4.2e-06 0.00047 21.9 0.1 1 23 727 749 727 749 0.98

8 17 4.2e-06 0.00047 21.9 0.1 1 23 874 896 874 896 0.98

9 17 6.8e-06 0.00075 21.2 0.1 1 23 976 998 976 998 0.98

10 17 6.8e-06 0.00075 21.2 0.1 1 23 1123 1145 1123 1145 0.98

11 17 0.18 20 7.3 0.1 1 14 1268 1281 1268 1284 0.89

12 17 4.2e-06 0.00047 21.9 0.1 1 23 1294 1316 1294 1316 0.98

13 17 3.5e-05 0.0039 19.0 1.2 1 23 1322 1345 1322 1345 0.95

14 17 0.00036 0.04 15.8 4.0 1 23 1351 1374 1351 1374 0.96

15 17 8.4e-05 0.0094 17.8 1.1 2 23 1381 1402 1380 1402 0.97

16 17 6.1e-05 0.0068 18.2 1.0 1 23 1852 1874 1852 1874 0.97

17 17 0.018 2.1 10.4 0.2 1 23 1880 1904 1880 1904 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.044	4.9	9.2	2.9	1	23	434	456	434	456	0.95
2	17	0.00021	0.024	16.5	1.9	1	23	469	491	469	491	0.97
3	17	0.013	1.5	10.9	9.3	1	23	497	519	497	519	0.99
4	17	7.6e-05	0.0085	17.9	6.6	1	23	526	548	526	548	0.99
5	17	4.9e-05	0.0054	18.5	0.2	1	23	554	576	554	576	0.93
6	17	4.2e-06	0.00047	21.9	0.1	1	23	582	604	582	604	0.98
7	17	4.2e-06	0.00047	21.9	0.1	1	23	727	749	727	749	0.98
8	17	4.2e-06	0.00047	21.9	0.1	1	23	874	896	874	896	0.98
9	17	6.8e-06	0.00075	21.2	0.1	1	23	976	998	976	998	0.98
10	17	6.8e-06	0.00075	21.2	0.1	1	23	1123	1145	1123	1145	0.98
11	17	0.18	20	7.3	0.1	1	14	1268	1281	1268	1284	0.89
12	17	4.2e-06	0.00047	21.9	0.1	1	23	1294	1316	1294	1316	0.98
13	17	3.5e-05	0.0039	19.0	1.2	1	23	1322	1345	1322	1345	0.95
14	17	0.00036	0.04	15.8	4.0	1	23	1351	1374	1351	1374	0.96
15	17	8.4e-05	0.0094	17.8	1.1	2	23	1381	1402	1380	1402	0.97
16	17	6.1e-05	0.0068	18.2	1.0	1	23	1852	1874	1852	1874	0.97
17	17	0.018	2.1	10.4	0.2	1	23	1880	1904	1880	1904	0.92

Sequence Information

Coding Sequence: ATGGCTAGCTGCTTCATTTGCAGCACCATCACTGGCGCCACCAACACCATCAGTCTCATACAAGACACGAGCAATCTACAATCTGGCAAGAAGCTGCTAGACATAGTGAGTGAGATAGCAGAGAAACCGTTGAAAGAGGAGGACATACATTCCACTGTGATATGCAAGAAATGCTGTCAAACGTGCAAGGAATATGATGACTTGCAAGTACGACTAAAGCACATCAAAACGGAGCTCCACGGACAAATAAACAAGACCAGCGAGAGCCCGACCAAGCCTGAACTGAAGAAGGTTGTTCTCCCGGCTTCGAAGCTGCACCCTCTGCCACCAGACTTCGTGCTCAATGTCGGTCGCCTGGCTGGAGTACAAAAGGCACTGACTACAATACCATCAAAACTAAACCTAAAAGTCACCGTCGGCTCATCGGTACTCACTCAAAGCATCAAGACCACCCCGGCATTAGCCAAAAACATAGTCATACAGAAAACAGAATCGCTGACACAGGAGAGCGAAGACTTTATATTCAAAGAGGGCAGTCTGCCAAAGGATTTTATATCTTCTGTGGTGCTCCAGAGGATTGGAGAGGATGGAAATACTGAGGACCAGCCTATGGAGATTGATGAAGATTGTTCGTACGCTATTGTTACACAAGAAGATGGAACAAGCGAAGTAACGGAAAAGAAATCTGGCGACCAGTCTTACGTGCTGCAAAAGGACCAGTCCATGTTCGACGTGAGCCTATTATCGTCGCTAGAAGACAGCGGAGGCGAGAATGAGACGGAACAGACTACGGACCAATATATCGTGGGCAAACTTGAGATACTGAGCGAGAGGGAAGATGAAGACGATGATGAACAAACTATAGTGATGTCAAGCGACAACTCTATTCTCCGAGTGGTGTCGGGGCAAAAACTTGTATACGGAGAGTCTGGTCTTGAACTGCTAAGTGAAGACGCGGACACACAAGCGGATAGCCAAGATGATGAAGATTCACAAATCGAGCTTCAAGTGTCAGGCGACGAGGAGACGGCGAATGCTATTATTGCTGCGGCGAGGGAACAAGGTGGCGCATTCATAAAAGTACAGTCGGGAGAAATGTACCGCGTCAAATCAGTGCAGAGCAAACCGAAAGAAGATAACGACACGGTATTCGCTGATCACATTGTGGTGAAAGAAGATGGAGTATTTAAATGTGTGCTGTGTAAGAAGCATAAAACCAAAGGCTCTCGGGCCGGGCGCTGCGCCGGCGACGCGGACTTCATGATGCGGCACATGCGCGCGCAGCACGACGCGCGCCTCTACATCTGCCGCACGTGCCACAAGGTGCTGCGGCGCCGCGAGCACTACCTCGCGCACGTGGCTCAACATGCGAAAGAAATTTCGGGCCAAGACAAGAGCAGATTGCATGAATGCAACGTCTGCCAAAAGAAATATAGTTCCAAAACCCTTCTAGTGGAGCATATGAACCTACACAACGGCCAGCGACCGTACACGTGCCATATTTGTCACAAGAGCTTCGCGTCCAAGTACACGCACCAGTCGCATCTCAAGACGCATTTGGACCGGCCGCGACCATTCAAATGCGCGGATTGCGGCAAGTGTTTCTTCACGCTACAGAACTTGAACCAACACCACAAAACTCATTCCGGGCTCAAAGAGTTCGAGTGCAACGTTTGTGGTAAGGCGTTCGGCACGCAACACAACTTGGAGATGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGTCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGTCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGTCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGTCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGTACACACACACACACACACACACACACACAACCTGCAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTGCACGGCGTGGTGCACTCGGGACAGAAGCCCTTCGTGTGCGGCGTGTGCGGCAAGGGCTTCGCGCGCCGCGCCGAGGTCAAGGACCACATGCGCACGCACACAGGCGAGCGGCCGTTCGCGTGCGACGTGTGCGGCGCGACGTTCTCGCAGCGCTCCAACCTGCACTCGCACAAGCGCGCGACCCACTACGACGACAAGCGCTACAAGTGCCACCAGTGCCCCAAGCGGTTCAAGAGGCGGAGACTATTGGACTACCACATAAAGGCGTCTCACACCGGCGAGCGCCCCCTGAAGTGTGAAGTGTGCAAAGCGACGTTCGTGTACCCTGAGCATTATAAGAAACATATTCGGATACATAGCGGAGAAAAACCATACGTCTGTGAGACTTCGGCACAAAAGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACACGTGTAGGGTAGCCGCCGGCGCACCGCCCCGCTACACCAGCAGACTGCGACACCGCACCGCGACCGACATGGCGGGGAAGCGACGGCCAGGACGTAGCCCCGCATTTCACACCGGCGAGCGCCCCCTGAAGTGTGAAGTGTACAAAGCTACGTTCGTGTATCCTGAGCATTATAAGAAACATATTTGGATACATAGCGGAGAAAAACCATACGTCTGTGAAGTGTGCGGCAAATCCTTCAACTCTCGCGACAACCGCAACACGCATCGGTTCGTGCATTCGGATAAAAAGCCCTACGAGTGTCTAGTTTGTGGGGCCGGGTATATGAGGAAACGGCTGCTATATTCCCATATGAACTCACAGGGTCACCTGGCGGAGTCCATCGTGGTGAACCAGCCGCGCGTCACCATCCAGCACGTGGCCGGCGGCGCGCCCGCGGACAACGTTTACGAGTCCACAGAAGAGTTGGAATTAGACAGTGATGGAGTAAAAGCTAACGAAAGCCAAGGCACGGTGTATATTGGCGACAAGAAATATATTCTACAAGAGGGGAAGACCTCTCTCAATCTCGTGCAGGATAACGAAGATATTCTTACTTATAATCTAGAGGGGGCTTTAAAGACTGAATCAAATTTCCTCGAGGCCATTACGGCTGAGCAATTGGGAGAGGAGTCACAGGTGGGTGACGGTAGCGGCGTGGTGCGCGTGGTGCAGATCACGCTGCCCGACGGCAACAACGGCTGGGTCGCCATCAACCCCTGA
Protein Sequence: MASCFICSTITGATNTISLIQDTSNLQSGKKLLDIVSEIAEKPLKEEDIHSTVICKKCCQTCKEYDDLQVRLKHIKTELHGQINKTSESPTKPELKKVVLPASKLHPLPPDFVLNVGRLAGVQKALTTIPSKLNLKVTVGSSVLTQSIKTTPALAKNIVIQKTESLTQESEDFIFKEGSLPKDFISSVVLQRIGEDGNTEDQPMEIDEDCSYAIVTQEDGTSEVTEKKSGDQSYVLQKDQSMFDVSLLSSLEDSGGENETEQTTDQYIVGKLEILSEREDEDDDEQTIVMSSDNSILRVVSGQKLVYGESGLELLSEDADTQADSQDDEDSQIELQVSGDEETANAIIAAAREQGGAFIKVQSGEMYRVKSVQSKPKEDNDTVFADHIVVKEDGVFKCVLCKKHKTKGSRAGRCAGDADFMMRHMRAQHDARLYICRTCHKVLRRREHYLAHVAQHAKEISGQDKSRLHECNVCQKKYSSKTLLVEHMNLHNGQRPYTCHICHKSFASKYTHQSHLKTHLDRPRPFKCADCGKCFFTLQNLNQHHKTHSGLKEFECNVCGKAFGTQHNLEMHGVVHSGQKPFVCGVCGKGFARRAEVKDHMRTHTGTHTHTHTHTQPAGARRGALGTEALRVRRVRQGLRAPRRGQGPHAHAHRYTHTHTHTHTTCRCTAWCTRDRSPSCAACAARASRAASRSRTTCARTQVHTHTHTHTHNLQVHGVVHSGQKPFVCGVCGKGFARRAEVKDHMRTHTGTHTHTHTHTQPAGARRGALGTEALRVRRVRQGLRAPRRGQGPHAHAHRYTHTHTHTHTTCRCTAWCTRDRSPSCAACAARASRAASRSRTTCARTQVHTHTHTHTHTHNLQVHGVVHSGQKPFVCGVCGKGFARRAEVKDHMRTHTGTHTHTHTHTHTHTHTTCRCTAWCTRDRSPSCAACAARASRAAPRSRTTCARTQVHTHTHTHTHNLQVHGVVHSGQKPFVCGVCGKGFARRVEVKDHMRTHTGTHTHTHTHTHTQPAGARRGALGTEALRVRRVRQGLRAPRRGQGPHAHAHRYTHTHTHTHTTCRCTAWCTRDRSPSCAACAARASRAAPRSRTTCARTQVHTHTHTHTHNLQVHGVVHSGQKPFVCGVCGKGFARRVEVKDHMRTHTGTHTHTHTHTQPAGARRGALGTEALRVRRVRQGLRAPRRGQGPHAHAHRYTHTHTHTHTTCRCTAWCTRDRSPSCAACAARASRAAPRSRTTCARTQVHTHTHTHTHNLQVHGVVHSGQKPFVCGVCGKGFARRAEVHGVVHSGQKPFVCGVCGKGFARRAEVKDHMRTHTGERPFACDVCGATFSQRSNLHSHKRATHYDDKRYKCHQCPKRFKRRRLLDYHIKASHTGERPLKCEVCKATFVYPEHYKKHIRIHSGEKPYVCETSAQKVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDTCRVAAGAPPRYTSRLRHRTATDMAGKRRPGRSPAFHTGERPLKCEVYKATFVYPEHYKKHIWIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKRLLYSHMNSQGHLAESIVVNQPRVTIQHVAGGAPADNVYESTEELELDSDGVKANESQGTVYIGDKKYILQEGKTSLNLVQDNEDILTYNLEGALKTESNFLEAITAEQLGEESQVGDGSGVVRVVQITLPDGNNGWVAINP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -