Paur014355.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pammene aurita
Gene Symbol
Zfp646
Assembly
GCA_947086415.1
Location
OX352313.1:20929264-20935703[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.001 0.12 14.3 0.4 1 22 72 93 72 93 0.95
2 34 2.3 2.6e+02 3.8 0.2 2 23 121 142 121 142 0.95
3 34 0.028 3.1 9.8 0.4 2 23 165 186 164 186 0.96
4 34 0.0042 0.47 12.4 0.1 1 23 190 212 190 212 0.96
5 34 0.3 33 6.6 0.4 1 15 217 231 217 240 0.78
6 34 0.029 3.2 9.8 1.2 1 23 246 269 246 269 0.94
7 34 0.00011 0.012 17.4 1.4 1 23 276 299 276 299 0.97
8 34 0.00014 0.015 17.1 1.7 1 23 306 328 306 328 0.96
9 34 3.7e-06 0.00041 22.0 3.0 1 23 334 356 334 356 0.98
10 34 0.0016 0.18 13.7 0.2 3 23 361 382 361 382 0.97
11 34 0.0041 0.46 12.5 0.4 1 23 466 489 466 489 0.95
12 34 0.67 75 5.5 0.4 2 23 516 538 515 538 0.92
13 34 0.11 12 8.0 4.8 1 23 560 582 560 582 0.97
14 34 0.00025 0.028 16.3 0.9 1 23 586 608 586 608 0.98
15 34 0.11 12 8.0 0.2 1 21 642 662 642 665 0.90
16 34 0.032 3.6 9.6 2.6 1 23 672 695 672 695 0.96
17 34 7.9 8.8e+02 2.1 0.3 1 9 702 710 702 712 0.89
18 34 0.29 33 6.6 0.1 1 23 749 771 749 771 0.94
19 34 0.0084 0.93 11.5 6.6 1 23 839 861 839 861 0.98
20 34 0.017 1.9 10.5 0.2 3 23 867 887 866 887 0.95
21 34 0.00061 0.067 15.1 0.2 1 23 895 918 895 918 0.95
22 34 0.22 25 7.0 0.4 1 23 924 947 924 947 0.95
23 34 0.16 18 7.5 3.3 1 23 953 976 953 976 0.96
24 34 0.00053 0.059 15.3 0.2 1 23 982 1004 982 1004 0.96
25 34 6.7e-06 0.00074 21.2 1.9 1 23 1010 1032 1010 1032 0.99
26 34 2.3 2.5e+02 3.8 2.8 1 23 1120 1143 1120 1143 0.94
27 34 0.027 3 9.9 2.9 1 23 1209 1231 1209 1231 0.95
28 34 9.6e-05 0.011 17.6 1.5 1 23 1235 1257 1235 1257 0.98
29 34 0.012 1.4 11.0 0.1 1 23 1262 1285 1262 1285 0.95
30 34 0.0016 0.18 13.7 2.7 1 23 1291 1314 1291 1314 0.98
31 34 0.028 3.1 9.9 1.6 1 23 1321 1344 1321 1344 0.95
32 34 0.0005 0.056 15.3 1.5 1 23 1350 1372 1350 1372 0.97
33 34 1.3e-05 0.0014 20.4 0.5 1 23 1378 1400 1378 1400 0.99
34 34 1e-05 0.0012 20.6 3.0 1 23 1406 1428 1406 1429 0.96

Sequence Information

Coding Sequence
ATGTTTAAACAAAATATAAAAGGACGCAGCCAAACAGAACACGAAACTCTGATAAAGGTAGAGCCTAGTGTCATACCAATAGAGCATTTGCTCAGAGAGAAACCAAGATACCAGCGCAGCGCTCGGGCAGAGGCTAGATATGCGACCAAGAAAAACGCCACAGCCATACTCGAATGCTGGTCCGTGAGCCCTTTCCGTTGGAAGCGCAATCAGTTTAAATGCGCGTACTGCGAAGCCAGCTTCACAGATTGTGCCCTCCTACGAGTTCACATAAGTACTTGCTCACCCCTACATAGCATTAAAGATATCTACAGCAAATTCAAAGAGATGTCCCTCATTAATATCGACGTAACACAAGCAACGTGCCGCCTCTGCTCTCTCCCGTACAGCGACATCAAGCAGATGCGCGAGCACGTCCTCGAACACGGCTACGATTACGATATCAACCAACCCGAAGGCGTTTTGCCGTTCTTCCTCAATAAAGAATTGTGGAGTTGCGTCATTTGCCAAGAAAAATTTAACAATTTCCTGAAACTATACGAACACATGAATATACATTACCAACATTACATTTGCCCAACCTGTGGAAAGGGATATATGACAGCGCCAAGATTAAGGAAGCATTCAGAGGTTCACATCACTGGTACGTTCCCTTGCAACGAATGCCCTAAGATATTCAGAATGCGCGCCGCTAGAGATTATCATAAAGCACACGCTCACGCCAAAGCGCCTAGATACGAATGTCCTCATTGTAACATGCGGTTCGACGGTTACTACGATAGGATGAATCACCTCAACGCAACTCACAGTGAAAAAGAAGTATCATATAGATGTCCGCATTGCGACCAATCCTTCAAGACGTCAGGCAAGCGAGCCATTCACGTTCGATCAGTCCATTTCCCGCCGCAACGAGATTTCCGATGTTCAAGCTGCGAATGGAGCTTCAAAACGGCTTACGAATTGAGGAGACACAAGGTGAAACATTCAGGGGAAAGGAATTTTCACTGCAACGTCTGTGATAAATCGTTCCCGAGGAATAGGGCGTTGAGGACGCATTTGAAAACTCATGATGATTTGGGCTGCAGATGGTGCGGAGCAATGTTCAAACAGCGGATGCTGTTATTGGCTCACATGAGGGAAATACACTCGGATATGTGCGAGCTTGTCAATTTGGGATCTGAAAAAATTGCGGATTCGGAGGCAAAAGTAGGAGTTAGACGTGTTAGGAAGTTAAAGGAGAACGTAAGCGCGCGACAGATGCGCCGGCGCCGCCGCGCCAACAACGAGTTGCCGGAGGAGTCCGAAAAACGCATCTCCAAAACTATGATGCGAAGGAACGCTATGACGCTCCTAGAATGCTCCACTGCTTGGGCTTTCCGCTGGTTCCACAGCGCCTTTTACTGCTCCTACTGTGATACTAAATTCGTAGACACTGCACCTTTACGTGAACACGTTCAAAATAACCACTTAAACGATCTACCTACAAACAAAATCTTCGCAAAACTTACTGAAAACAATATGGTCAAAATAGACATAGGTAACCTCAGCTGTAGGCTATGCAACCATCCTTTAACGGACATAGATGACCTGAAAGATCATCTGGTTTCACAACACGAAAAAACTATCAACTCTGATTATAGCGACGGAGTACTACCGTTTAAGCTTGACCAAAACGGATTCTTTTGTCAAAAATGTTTCTCGCATTTCGTTAGTTTCTCCAAATTGAATGAACATATCAATACACATTATAAGAATTACATATGCGATTCGTGCGGTAAAGGTTTCGTTTCGAAATCTCGGTTTCGCACTCACGTCCAGTCGCACGAAAGGGGCTGCTTCCCTTGCGGGGATTGCTCGGAAGTCCTAGAAACAAGAGCCGCTAGAATGTGCCACAGGTTACGTGTGCATAAGAAAGGTGTAAGATACACTTGTCCTCGTTGCCCGGAACTGTTCACAACATATTACGCGAGAGCAAAGCACTTGGTAGACGACCACGCTCAGCAACAACTAGACTACGACTGCACAGCTTGTGGCAAATCATTCGAGACCAGCTGCAAGAGGGCAGCTCACTTCCGCACCACGCATAAACCTGCCGAGAAGAGATACGAATGCCCCCAGTGCCATTGGTCCACCGACCTCATACTTAAATGGAAACCGAAACGCAAGTATGACGATCACAGAGACAATGCGGCTATTATAATAGAGTGTTCCAACGTGTGCCCGTTCAGGTGGAAGCGGGGGACGTTTACGTGCGCCTTCTGTCCAATGTCCTTCGGGGACTTCAGCGGCGTCAGGGATCATGCTCTAGAGCATCCTAACCGGGTCGAGGCGATGCGATTGGCTCGCCCTTTAGATAACGTCAAAGTGGAGATCACTGGTCTCCGCTGCGAACTCTGCTTACTAAATATTAAAGACGTTGAAACGTTAAAGGACCACTTAATCCAAATCCATGATAAACCTATTAGAGGAAATCATGGCATCGGTGTCACCCCTTTCTTAATTGAAGGAAAAGAGTTTGTTTGCACTCATTGTGGAGAGCACTTTGAGCTATTCTCAAAATTAAATACACATATGAATCATCATTATCCAAATAATATATGCTTCCAATGCGGTAAGGCGTTCGCCGCCGCGCATAGACTTAAGGCTCACTTAGTTATACACGAAGCCTCCAACAGTATGCAGTATAAATGTTCAAAATGCGATGAAGTTTTTGCGACTCGTGCATTAAAGAATAGCCACATGGCTCTAGCGCACGGGCCTGAATACCGCTATAGATGTCCATACTGCAACGACTCGTTCTTAAGATATGCAGATCGGGCTAAACATCTCAAAGTCGCGCATGATAGGAAAGTAGAGTATCCTTGCCATCTCTGCACAGCCGTTTTCTCCATGTGCAATCAGAGAACCAAGCATATACAACAAGTACACATTAGACATAAGCAGTTCTTCTGTGCCTTGTGCCCGTATCagttcgttacggcggcgcaacttcggaatcacatggtcaaacatgtaggggagaggaaataccaatgccaggtctgcaagaagtcctacgctagaacaaaaacgttaaaagagcacatgcgaatacataataatgataaacggtttgtttgcgagttttgtaacaatgcgtacgtgcagaagtgtaGACGGAAAGGTGAAGACGTTCAGTTCAAACCTGAATCCGCCGTTGAGGTCAAACTCGAGTTGACCGAGGCAGAGGATATTGACGCTGCGTCCGCAGCTCTCAAACGGGAGGAGGGCGAACAGAGACGAACCAACTTTCGAAATAACATCGCCACTATCATAGACACAACTACCGTATACCCCTTCAAATATAGACGGGGAATGTACCTCTGTTACTACTGCAAACACACATTCCTAGAACCCGAGAAACTACGGCAGCACAATCGTATCTACCATTCCGAGTCTAAAGTACTACCGAAACCCAGAAAATATGAACCCGTCAAAATGGATTTTTCGACCGCTTTGTGCAAGCTGTGCCTAACTGAAATAAGCGACTATAACATGATGAAAACACATTTGAGCGAGCACGGCAAAGATTTAGATAACACTTTAGGGGACAGCGTACTTCCGTATAAGTTAGGCAGAGACGAGCATGCCtgtcaagtgtgtgggaagacatacgagatgttcctgagcttgcataaacatatgaacgaccattacgagcattatatttgtgagaaatgtgggaagagattcgcgacatcacagcgcatgctcaatcacactcgcactcacgaaaccggggttttcccgtgcaagcaatgtaatgagacctttccatcatacgctcccttatacacccacgttgctaaagtccatagatttaacaagagatacaaatgtcctatttgcaacgaaaaatttgtgtcttacaagcagagactgaagcatcttcacaccgtacatgagcaaaaaacgcccgtattcccttgtccgtcttgcgatagagtattcgatttatgcagtaagcgaacagcacatattaggttccagcacttgcaggagcggaatcacgtgtgtagcgtgtgcgggatgaagttctttagtaattatgagcttcaagagcatacgattaagcacagtggagagaggatataccagtgtgatgtttgcaagaaggcgtacgctagaataaagacgcttagggaacacatgcgcatacataacaacgatagacggtatacttgtccggtatgcgggcaaagtttcattcagaattgtagcatgaagcaacatattcgggtgcatcaTCCCACGCATTTAAAAGATTTATTTTAA
Protein Sequence
MFKQNIKGRSQTEHETLIKVEPSVIPIEHLLREKPRYQRSARAEARYATKKNATAILECWSVSPFRWKRNQFKCAYCEASFTDCALLRVHISTCSPLHSIKDIYSKFKEMSLINIDVTQATCRLCSLPYSDIKQMREHVLEHGYDYDINQPEGVLPFFLNKELWSCVICQEKFNNFLKLYEHMNIHYQHYICPTCGKGYMTAPRLRKHSEVHITGTFPCNECPKIFRMRAARDYHKAHAHAKAPRYECPHCNMRFDGYYDRMNHLNATHSEKEVSYRCPHCDQSFKTSGKRAIHVRSVHFPPQRDFRCSSCEWSFKTAYELRRHKVKHSGERNFHCNVCDKSFPRNRALRTHLKTHDDLGCRWCGAMFKQRMLLLAHMREIHSDMCELVNLGSEKIADSEAKVGVRRVRKLKENVSARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFHSAFYCSYCDTKFVDTAPLREHVQNNHLNDLPTNKIFAKLTENNMVKIDIGNLSCRLCNHPLTDIDDLKDHLVSQHEKTINSDYSDGVLPFKLDQNGFFCQKCFSHFVSFSKLNEHINTHYKNYICDSCGKGFVSKSRFRTHVQSHERGCFPCGDCSEVLETRAARMCHRLRVHKKGVRYTCPRCPELFTTYYARAKHLVDDHAQQQLDYDCTACGKSFETSCKRAAHFRTTHKPAEKRYECPQCHWSTDLILKWKPKRKYDDHRDNAAIIIECSNVCPFRWKRGTFTCAFCPMSFGDFSGVRDHALEHPNRVEAMRLARPLDNVKVEITGLRCELCLLNIKDVETLKDHLIQIHDKPIRGNHGIGVTPFLIEGKEFVCTHCGEHFELFSKLNTHMNHHYPNNICFQCGKAFAAAHRLKAHLVIHEASNSMQYKCSKCDEVFATRALKNSHMALAHGPEYRYRCPYCNDSFLRYADRAKHLKVAHDRKVEYPCHLCTAVFSMCNQRTKHIQQVHIRHKQFFCALCPYQFVTAAQLRNHMVKHVGERKYQCQVCKKSYARTKTLKEHMRIHNNDKRFVCEFCNNAYVQKCRRKGEDVQFKPESAVEVKLELTEAEDIDAASAALKREEGEQRRTNFRNNIATIIDTTTVYPFKYRRGMYLCYYCKHTFLEPEKLRQHNRIYHSESKVLPKPRKYEPVKMDFSTALCKLCLTEISDYNMMKTHLSEHGKDLDNTLGDSVLPYKLGRDEHACQVCGKTYEMFLSLHKHMNDHYEHYICEKCGKRFATSQRMLNHTRTHETGVFPCKQCNETFPSYAPLYTHVAKVHRFNKRYKCPICNEKFVSYKQRLKHLHTVHEQKTPVFPCPSCDRVFDLCSKRTAHIRFQHLQERNHVCSVCGMKFFSNYELQEHTIKHSGERIYQCDVCKKAYARIKTLREHMRIHNNDRRYTCPVCGQSFIQNCSMKQHIRVHHPTHLKDLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-