Paur031843.1
Basic Information
- Insect
- Pammene aurita
- Gene Symbol
- Kdm5d
- Assembly
- GCA_947086415.1
- Location
- OX352315.1:438685-450069[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.8e-26 2.8e-22 80.3 0.0 2 89 101 184 100 184 0.93 2 5 0.031 1.3e+02 4.5 0.0 70 89 197 217 185 217 0.77 3 5 0.0035 15 7.5 0.0 71 89 231 250 218 250 0.79 4 5 0.0011 4.6 9.1 0.0 70 89 263 283 251 283 0.77 5 5 0.0032 13 7.6 0.0 71 89 297 316 284 316 0.77
Sequence Information
- Coding Sequence
- ATGGGAAAATGTGACGAAGCTAATGTTGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACGTTCAGCGTGCCCCCGGAGGCGCCCGTGTTCGAGCCGACACCAGAAGAGTTCCTGGATCCCCTGGCGTACATCAGCAAAATAAGGCCAATCGCGGAGAAGTCGGGAATATGCAAGATCAAACCCCCAGCGCACTGGCAGCCGCCCTTCGCCGTGGATGTGGACCGTCTGCGGTTCACGCCGCGGATACAGCGGTTAAACGAATTAGAGGCTATAACGAGGGTGAAGCTGAACTTCCTGGACCAGATCATGAAGTTCTGGGAGCTGCAGGGCTCCGTTCTCAAGATCCCCACCGTCGAGAGGAAGCCGCTCGATCTCTACTCTTTGCACAAAATCGTTAAGGAGGCTGGCGGCTTCGACACGTGTTCCGCGGAGCGCAAATGGTCGAAGATCGCGCGACGCATGGGACACCCGCAGGGCAAGGGCATCGGCTCCATACTCAAGAACCACTATGAGCGCATTCTGTACCCGTACGATGTGTTCAAGAGCAGCGGCGTCGTCGACAACAAGGAAACATCGCAGGGCATAGGATTCATACTCGAGAACCACTACGAGTGCATTCTGTACCCGTACGACGTGTTCAAGAGCAGCGGTGCAGTGGACAACAAGGAAACATCGCGGGGCATAGGATTCATACTCGAGAACCACTACGAGCGCATTCTGTACCCGTACGATGTGTTCAAGAGCAGTGGCGTCGTCGACAACAAGGAAACATCGCGGGGCATCGGCTCCATACTCAAGAACCACTACGAGCGCATTCTGTACCCGTACGACGTGTTCAAGAGCAGCGGCGTCGTCGACAACAAGGAAACATCGCGGGGCATTGGCTCCATAGTCAAGAACCACTACGAGCGCATTCTGTACCCGTACGATGTGTTCAAGAGCAGTGGCGTCGTTGACAACAAGGAAACACCTGAGGGGCTCTGCGAAGGTTTCCAGGCTAACTCAGGGGTACTGGGGATAACCTTCCGACTTGTCGACGCGAGCACACGCGCGGTCAGGATAGGCTATACTACGGGGGGAAAGGAAGGAAGAGTCCTGCGGCGTGTCGACGCGAGTACACGCGCGGCCTATTCAGGACTCGGCCCTAGGGAAGCCCGGGACGACGCGAGATGGACGCGCGCCGCAACGCCGGACTGTGCAGCCGTTGTTTCTAGCGCGAGCTCGAAACATCGACTGCCTGGAGGTTCGTTCGTTGGTCATCTTACACTCCCCCTTTCAGGGGGTGTGAGGAAGCCATTTCAAGGCTGGGCCTTCTGTGGCGGCATCTGTCGCGGGCCGTAA
- Protein Sequence
- MGKCDEANVEVSMGDSASPMKPDNFTFSVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIMKFWELQGSVLKIPTVERKPLDLYSLHKIVKEAGGFDTCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGVVDNKETSQGIGFILENHYECILYPYDVFKSSGAVDNKETSRGIGFILENHYERILYPYDVFKSSGVVDNKETSRGIGSILKNHYERILYPYDVFKSSGVVDNKETSRGIGSIVKNHYERILYPYDVFKSSGVVDNKETPEGLCEGFQANSGVLGITFRLVDASTRAVRIGYTTGGKEGRVLRRVDASTRAAYSGLGPREARDDARWTRAATPDCAAVVSSASSKHRLPGGSFVGHLTLPLSGGVRKPFQGWAFCGGICRGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -