Pscu001445.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- nfxl1
- Assembly
- GCA_958295655.1
- Location
- OY282449.1:36471653-36475033[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.4 1.2e+04 -3.6 1.8 15 19 190 194 189 194 0.83 2 19 0.13 1.2e+03 -0.4 0.4 4 10 225 231 224 231 0.95 3 19 6.4e-09 5.5e-05 23.0 14.4 1 18 239 255 239 256 0.98 4 19 2 1.7e+04 -4.1 5.4 8 18 279 292 274 293 0.80 5 19 1.9e-05 0.17 11.9 13.3 3 19 294 311 292 311 0.91 6 19 0.38 3.3e+03 -1.8 1.0 6 10 336 340 335 340 0.92 7 19 9.8e-11 8.5e-07 28.8 14.7 1 19 346 364 346 364 0.99 8 19 0.93 8.1e+03 -3.1 0.5 1 7 389 394 388 396 0.49 9 19 6.6e-06 0.057 13.4 9.1 1 18 399 416 399 417 0.90 10 19 0.32 2.8e+03 -1.6 0.4 1 5 426 430 426 435 0.75 11 19 2.5e-07 0.0021 18.0 15.9 1 18 451 468 451 469 0.98 12 19 1.9e-08 0.00017 21.5 14.3 3 18 480 495 472 496 0.85 13 19 0.21 1.8e+03 -1.0 11.2 9 18 541 550 532 551 0.89 14 19 0.19 1.6e+03 -0.8 3.7 4 11 565 572 554 573 0.86 15 19 0.36 3.1e+03 -1.7 1.2 6 10 629 633 628 633 0.85 16 19 8.1e-06 0.07 13.1 4.5 1 12 639 650 639 650 0.97 17 19 0.0041 35 4.5 11.7 4 18 680 694 678 695 0.93 18 19 1.8 1.5e+04 -3.9 1.6 8 13 700 705 699 705 0.74 19 19 1.4e-05 0.12 12.3 12.6 1 17 746 761 746 765 0.95
Sequence Information
- Coding Sequence
- ATGTCCAACGTAAGTAATCCTTGGAAAATAGCTAAACCaaataatagcaacaatttGAAGAAAGATCAGAAGCCCAAGCAGAAGCTCAAACcaacgcaacaacaaaatattgtaagtgACAACGAGGTGGGACCTAAACGGTTCGAAGAAGTTCATGCGAAAAATATAGCGGCTGCAAAGAGAATTGTTGAGAAGTACGCTTCTAGTTCCGAGGATGAGGAGGAGATCGATGAGAAAAAAATACTGACCTCCATTTATCAGCACTACAAGCCTAGTACCAGCGCTAATGCCGATGCTCAGCTTCTAAATAAAACTGCAGGTTTTCTAGAGAATGTGCTGCACTCGGGTGCAGCTACTTGCCTCATATGCATCGGTAGTGTACGACGTGCTGATGCTATATGGTCATGTGGACATTGCTATTGCTTTTTCCATCTTAATTGCATTCGGCGTTGGGCTAACGATAGCATTGCTCAACTTAAAGCGCAAGCCGGGCAGCATCAAGAGGGTTACTATAATAATTTGGGCGAATATTTGCCACCCAAACGAGCTCGTCCATTGCATTGGCGCTGTCCACAGTGTCGCGAAGAGTACGAACCCGAAAAACGGCCTGCGGAGTACGAATGTTTTTGTGGCAAAGAGGTAAATCCACAGTCTCAACCTTTCTTAGTGCCACACTCTTGCGGTGAGATTTGTGGCAAACGACTGAAACCAGACTGCGGGCATACATGTATGTTACTTTGCCATCCCGGACCATGCCCACCTTGTGCACAGTATGCAATTGTCTCTTGTTTGTGTGGTAAGGCACCGTTAAAATCAGTCAGATGCACAGAGAAAAAATGGTGCTGCACACAAAAGtgCAAGGAACGTTTACCATGCAAGGAACATCTGTGCAATCAGCTCTGCCACAAGCCAGGAGAATGCCCGCCATGCAGTAGTACGAGTATGCAACCATGCGAATGCGgtcgagaaataaaaaaacgtaGTTGTTCCGATTTAAAATGGCACTGTCAAAAGGTTTGTGGATCAAAGTATCCGTGTGGCATACATACATGTGAAAGAGTCTGTCATTCGGGTCCATGTGGAGAATGTCCTCTTGGCATGCCGCGCTCCTGTCCGTGCGGTAAAACAGAAAAGATTGGTCCCTGCTCGGAAGTTATAGACACCTGCGGTGATACATGCCAAAAGCTTTTACATTGTGAAATTCATTCTTGCACTCAACGGTGTCATCGTGGCGATTGCAATTTGTGTTTGATAATCATCAAAAAGAAGTGTCGCTGTGGAATGCATGAAAAGGAGTTGCCCTGCTCGAAAGACTTCACATGCGATACCAAATGCAAACAAATCCGCGATTGTGGGAAACATGCCTGCAACAGAAAAtgCTGCGATGGACGCTGCCCGCCATGCGATAAAATTTGCGGAAAATCGCTGTCATGTAAGAAGCACAAATGTCAATCGGTCTGCCATGAGGGGCCATGTTATCCATGTGAACGACAGTCACAAATAAATTGCCGCTGTGGTAAAACATCCAAAAATGTTCCTTGTGGGCGTGAGCGTACTGCGCGTATTATGTGTCTGGAACCGTGTCGGATTCCATCGAAATGCCACCATCCGTCCAAACATCGTTGTCATAAGAATGAATGCCCACCTTGTAAtcaaaaatgtggtttacccaATGATGTTACTGGTTGCGTGCACATTTGTATAGTGAAATGTCATGCAGCAGTGAAGGTGGCAAAGAAATCCGCTGAAGGTGCTTGGGAACTAAATAAAAAGGTTGAATATAAAAATCTACCACATCCACAGTGTGAAGAGAAAGTATCTGTCGCTTGTCTAGGCGGCCATGAAGTAGCCGAATGGCCATGCTGGAATTCAAAACCCACATCCTGCCAACGTCCATGCAATCGTTCCTTACGTTGCGGCAATCATAATTGTGCACTTTTGTGTCACTCTGTTGTCGATCTCTCCGACATGAAGGAACAAAAAGGTTGTGCCAGTTGCCAAGAAGGTTGCAATTTGGCTCGTCCTCCTGGTTGCGTACACGCATGCACACGTGCTTGCCACCTGCCGCCATGCAATCCATGCGATAAgattattaaatcaaaatgtcaTTGTGGACTGACGCAAGTCATGTACAAATGCTCGGAATTCTTTAGTATCGAGGGCAGCGAAGATCAGAAATTAGATCGGCAAGATCGTTTAAAAAGTTGTGGAAATCGATGTTTGAAAAATTTTCCGTGCGGGCACCGCTGTATCACTGCATGCCATCCAGGCAAGTGTCCGAGTCCAGAGTTGTGTCGCAAAAAAGTGCGCATATTCTGTGAGTGCAAACGTTTGAAATACGAAGTAGCATGCGATAAACATCGTGCTGGTCTAACTTCCTTGCCATGTGATGAACATTGTGTGGAGTCTCGCGCTAAGCTCGAGttaattcaaaaacaacaagcagAAAAGCTACGGCTCGAAGAAGAGGCTAAAAACCGCATGGAAGTGGAACAATTCGAAAAGAAATTCAGTAAGCGAAAGCCCAAAGAACGTAAAGTAATGATGGAACAGACTAAAGAGGAAATCAATTGGAAATTAATTTCCATATATGCTGGCACAACAGTAGCAATTCTAATGGCCATTGCTGCTGCATTCTACGAAGAGAAATAA
- Protein Sequence
- MSNVSNPWKIAKPNNSNNLKKDQKPKQKLKPTQQQNIVSDNEVGPKRFEEVHAKNIAAAKRIVEKYASSSEDEEEIDEKKILTSIYQHYKPSTSANADAQLLNKTAGFLENVLHSGAATCLICIGSVRRADAIWSCGHCYCFFHLNCIRRWANDSIAQLKAQAGQHQEGYYNNLGEYLPPKRARPLHWRCPQCREEYEPEKRPAEYECFCGKEVNPQSQPFLVPHSCGEICGKRLKPDCGHTCMLLCHPGPCPPCAQYAIVSCLCGKAPLKSVRCTEKKWCCTQKCKERLPCKEHLCNQLCHKPGECPPCSSTSMQPCECGREIKKRSCSDLKWHCQKVCGSKYPCGIHTCERVCHSGPCGECPLGMPRSCPCGKTEKIGPCSEVIDTCGDTCQKLLHCEIHSCTQRCHRGDCNLCLIIIKKKCRCGMHEKELPCSKDFTCDTKCKQIRDCGKHACNRKCCDGRCPPCDKICGKSLSCKKHKCQSVCHEGPCYPCERQSQINCRCGKTSKNVPCGRERTARIMCLEPCRIPSKCHHPSKHRCHKNECPPCNQKCGLPNDVTGCVHICIVKCHAAVKVAKKSAEGAWELNKKVEYKNLPHPQCEEKVSVACLGGHEVAEWPCWNSKPTSCQRPCNRSLRCGNHNCALLCHSVVDLSDMKEQKGCASCQEGCNLARPPGCVHACTRACHLPPCNPCDKIIKSKCHCGLTQVMYKCSEFFSIEGSEDQKLDRQDRLKSCGNRCLKNFPCGHRCITACHPGKCPSPELCRKKVRIFCECKRLKYEVACDKHRAGLTSLPCDEHCVESRAKLELIQKQQAEKLRLEEEAKNRMEVEQFEKKFSKRKPKERKVMMEQTKEEINWKLISIYAGTTVAILMAIAAAFYEEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471042;
- 90% Identity
- iTF_01471042;
- 80% Identity
- -