Pscu014204.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Palloptera scutellata
Gene Symbol
pnr
Assembly
GCA_958295655.1
Location
OY282452.1:45422563-45435613[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.45 1.3e+03 -1.0 0.1 23 29 214 220 210 226 0.61
2 2 9.3e-17 2.7e-13 49.2 2.5 1 35 726 759 726 760 0.98

Sequence Information

Coding Sequence
ATGTGTAATGTACCGCCTAAATTCTTTCAAGTTTGTCGTTTGTGCCTAACTTTGGTCAATGATTATGACGTCGCGACACACCAAATTTTCGATTCAGCTAATGCCAATACATCTAGCGTTGCTCAAAGTCAATCACATCAAACCCCCATAAATGCAGACATTGATCAGCAGATGGCGGAAGAAATATCGTGCAATTGCAGTGGAAAGATTTGTAATTGTGATAACTTTCCGTCGTTACTAACAAACTCAAATGTTACTGGAAtcgaacaaaaacttaaatttggaGTACAATCATTATCATCTGTACATAATGTGCCTTCCTCCTCCATCACCTCCACCCACGCTGGGACTCGTGTATCAGGTCAAGCAATATTGGACAATTCATATGATCAAAGTAATTTAGTGATTTTTCCGACCACATCAATTATGCAGAGCGAACCTCAACCGCATAAAAATCTTGAAAATGAACTATTATCCGATGATAACGATGAGGCAAGATATAATCCAAATAAAAGTATTGGAGAAGAGGAACACAATAAAGAGCATTGTTGTGATGATTCATCACCACATATTACAATACAGATACTCAGTTGCCTCTCTATAAAGGTATCTCCAGCCGATGGATTACCTACAGTTATATGTAGTGATTGCAGAACTCAGCTAAGATCTTTCTGGAGATTTCGTTTAACAGCACAAAAGGCCGAAATGACTTTGAAGGAGTTTATAAATAACTCAAAAAATTCACTACAGAATTCTTCTAAGAATACCGTTAAATTGGATAACATATTACGTTCAACAATATGTAGGAAATCATCATCAGAACGAATGGCAGCAAAAGCTTTAACTGAATTGAGTAAATCttcaaaaagtaattttgttaacattaataaaagcaaaaatataactgCCAAGGATTTTAATGAAGTATATCCTCGTGAAGATGATATACATGCTGTTCATACGACGGATCACTTAAGCTcgaatatggaaaaaaatacatttaatgtTCCGTCTTGCTCACTAACCAAATCATTTGATTTGCCGCGAAATTCTAAGGCGTCAGAAATTCAATCAGATACATCATCAACTGATGTCCTGCAATGCATCCCgaatgtaaagaaaaatgaGCATTTCGCAAATGATACTCACAGCTATGAAGGTAGTATTGTAAACATTAAGAGCGAACCCAATATATCATCTGTTTTAGATGTTGAATCATCTAAAAATGCCCCAGATGTGGAAAAATTCAAAACCCTACAGCAGCAATTGGAAACGGCTGCAGTGCTTATGGATATAAGTAAAAAAGTTATTATATCGCCACCATGCTCGAATCGCCAATCTCCAAGTCTTTCTTTGATAACAGATGCAAGTATTAAAAACTCTGTGATAAAAGCTAAACGTCCATCGAATGACAAGAAATTTCAAGACGGAAAAGAAATAGacttatcaattaaaaaaccTAGAAGTGAATTTTCACATCCTCAAACTACCTTATCTTCATTACATCACTTTGGCCGGCCTACAATACTCGAATCACACTCACCTACAAACTtagatttagaaaataaaataaatgacagTATTATTACTAAAGTGGAAATTGAAGGGCCACATAAAAGTTATAGTAGTAATGCCCCCCCTCCTATAGAAAACAAGGATGCTTCATACTCTGATACAGAAGAGAGTTCAGATTCCAATCGTTTGGAAATGGATATAACAGTGCTGAACGAACGCAGATCGCCGGATAGCATGACTTCAGAAGAACAAGGGACAGATGCTGCAACTACTCAATTATGGCAAGCATTGGCTCGCTCAGCAGCTAATAACACTCACGAAGAAAACAAAACGACGCAATTATTACAAATGATACAAAATTCTCTTGTGTTCCCGGTGGCGTCATCAACTGTGATGTCAGTGGAAAATGTACCTGAAGAACCAATGGCATTATTGAAAAATGATAGCGCTGATCTTTCTGCCAATTTTAAATTGTGTCGAAGGAAACAAACTTATCCAACAAAGACAGATTCTACAGAATTGCCCAATGTAAATGCAATTAATAACATGAATATTGATGGTAATATCAATTCTCATAGCAATATCGTTTTGGATACTTTTCAAGATAAAAAGaaTTCCAAAAACGTTAATTTAATGAACAGTACTCAAAAGGATATGTCATGTTCGAATTGTGGAACTCTGACGACAACAATTTGGCGAAGAAGTGTTCGTGGGGAAATGGTTTGCAATGCGTGTGGCTTGTATTTCAAATTGCATGGTGTGAATAGACCTCACTCCATGAGGCGTGATACTATTCATACTCGGCGCAGACGTCCGAAGGAATGTGAAAAGgcggcaaaaaaaagGAATAAACATTTATCTGCTGCTTCTGGAGTATTAAACAGAATGCCAATTGAAGATGCAAATATCACAATGGATCTTAAGAATCAAGAGATGTTTTTAACAGTTGGAAATGCAAATAATTCTGGATTTTCTTTTTCGaaatataagaGGTACATGGAAGGAGAACAACATGCTACAACTTTAAAGGAAagcctattaaaaaaaaagaaaattaaaacagagTCTAATAAGGAAGGCACAGTTGAACAAGCAGCAGATGAATTTTTAGTACCTCTTAATCTTGTTTCCAGTGAGAACAACACTAAGTTAACATAA
Protein Sequence
MCNVPPKFFQVCRLCLTLVNDYDVATHQIFDSANANTSSVAQSQSHQTPINADIDQQMAEEISCNCSGKICNCDNFPSLLTNSNVTGIEQKLKFGVQSLSSVHNVPSSSITSTHAGTRVSGQAILDNSYDQSNLVIFPTTSIMQSEPQPHKNLENELLSDDNDEARYNPNKSIGEEEHNKEHCCDDSSPHITIQILSCLSIKVSPADGLPTVICSDCRTQLRSFWRFRLTAQKAEMTLKEFINNSKNSLQNSSKNTVKLDNILRSTICRKSSSERMAAKALTELSKSSKSNFVNINKSKNITAKDFNEVYPREDDIHAVHTTDHLSSNMEKNTFNVPSCSLTKSFDLPRNSKASEIQSDTSSTDVLQCIPNVKKNEHFANDTHSYEGSIVNIKSEPNISSVLDVESSKNAPDVEKFKTLQQQLETAAVLMDISKKVIISPPCSNRQSPSLSLITDASIKNSVIKAKRPSNDKKFQDGKEIDLSIKKPRSEFSHPQTTLSSLHHFGRPTILESHSPTNLDLENKINDSIITKVEIEGPHKSYSSNAPPPIENKDASYSDTEESSDSNRLEMDITVLNERRSPDSMTSEEQGTDAATTQLWQALARSAANNTHEENKTTQLLQMIQNSLVFPVASSTVMSVENVPEEPMALLKNDSADLSANFKLCRRKQTYPTKTDSTELPNVNAINNMNIDGNINSHSNIVLDTFQDKKNSKNVNLMNSTQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKAAKKRNKHLSAASGVLNRMPIEDANITMDLKNQEMFLTVGNANNSGFSFSKYKRYMEGEQHATTLKESLLKKKKIKTESNKEGTVEQAADEFLVPLNLVSSENNTKLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01471023;
90% Identity
-
80% Identity
-