Pscu012937.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- THAP3
- Assembly
- GCA_958295655.1
- Location
- OY282452.1:14520667-14525196[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 3 1.5e+02 3.1 3.5 2 23 527 549 526 549 0.90 2 9 1.8 91 3.8 6.6 2 23 854 876 853 876 0.95 3 9 0.0015 0.075 13.5 0.4 3 21 889 907 888 908 0.94 4 9 1.1 54 4.5 2.9 1 20 921 941 921 943 0.93 5 9 0.023 1.2 9.7 2.6 1 23 988 1010 988 1010 0.97 6 9 0.0066 0.33 11.5 4.7 1 21 1017 1037 1017 1040 0.95 7 9 0.0001 0.0051 17.2 0.4 1 23 1046 1068 1046 1068 0.96 8 9 8.9e-06 0.00045 20.5 2.0 1 23 1074 1097 1074 1097 0.96 9 9 1.4 70 4.1 0.8 1 12 1103 1114 1103 1120 0.82
Sequence Information
- Coding Sequence
- ATGCCATCATCCTGTGCAGTGTTAAACTGCAAAGACAAATATGGTCATAAGGAGAACATTTCATTTCacaaattTCCAATTAAACGACAGAATCTGCTGGAAAAGTGGTTAGAATTTGCAGAACGTGGAGCCACATGGCAACCTTCCAAATGGAGCGCGATATGCAGTCGTCATTTCCGTGATGAAGACTTCAATTGTGCCAATGAAAGGAAAACGCTTAAGAAGACAGCGGTACCTAGTATACAAGTGTTTCAACAATTGTGCGAGCACCGACTAAATGTTGGATTCGCAGTACAGAAAGATACTGTGCAAAAAGCGACAGCGACAACTACAACGGGAGCTGAAAAGGGAGTCGAGGAAACTGAACTGGAGCAGGAAGAAGCACAAatGGCAGTGCTTGACCACATCGCCCCAGGCAACAGTTTACCAAAAGTGAATTGCCGTTTTTGTGGTATTGCCTCCATTACCACGGCCGTTGTCACCTTTGCCACAAATTTCGAAATCTACGGCATGATTCAGAAATGTTTTCCCACACTCAACATACAACAAGATGATAATTTGCCCAAGGATATATGCCGGTTGTGTTTGAAACGTTTGGAGAATTTTTCACGTTTCATTGATAAAGTGTGCGAAACTCAAAGCGAGCTGCAGCGTAAGTTTCGAATCGAAAAATCCAATTGTAAAACTGCAGAACGacagcaattaaaaattaaacaagaacCAGTGGTGCGTGTGAAGCAAGAGGTAGCCGAAGGTTTTGAAAGTTTTCTGTCGGATGACATGGATATGGGAGTGGATGACAGCTGCGAACAGGGTGACGGTGGTGGTTCTGTGGAATCTGCATCGGCGGTTGagcaaaaatttgatttttgcgATTTCCCAATATTGAATGCTCAggatattattaataattgtgATATTATGGAAATTATCAATTTAGATGATCCATTTATTAATATACCCGATGATGATGCAAACACCAATTGTGATAGTAGTGCAACGGCACAATTGCctacaccaacaccaacaccagcatCCGCAGCAACGACAGCGATGAACGCGAATTCATTGGCGAAACGACCTTTTCCTAGTGCGCATGAACTGCTCCAGTCACACCTACTAATCGAGGAACATAATTATGCGAATGCAGCGGAGGATTTCAAGGAGGAATggcaaattaaaaactattataaaactgaaaaagacGATGATTATGAACAGGAGGAAGCCGAAGATGTAGGAAATGCAGAACACGAGGAAGACTACCAGAACTACGGGCTGGAAGACAACGGAGCAGTGAATGCAAGCGTTAATATGATAAGCGCCTCTTGTGAAAATCGTTCTCTCAAACCGATAGTGACATCAGTGAGCGCAATTGCCGAACGTCGCTTGCAATTTCCACCACTTGACAATGCTGCGACGCCAACAGATACAGGGAAGCCAGTGGTGACTGCAGTAAATGACCTGCGCACAATGAAGCAACATGAGCCGCAAACTTATGTCAAGTCGCACAATAAACCGAACATTGTGGTGCTAAATGAGAGCATTGTAAAGTCAGCGCCTGCCTTTCAACTGCACGCATGCAACTGTTGCCAATTGACATTCTTCAGCACGGAATCTTTGAATCAACACTACAATGCGGTGCATGCGCAAATGCCCATGGTGAGTGTGCCCAGTATCAATATATGGGAAAATGGCCATAGCGAACGTGCTGGCGGCACTGGTGCGGCTTATgtggaaaattgtaaaattgaagAGGGCTACAATTCGAAGGAAGCAACCTTAATTGCTGGCAGAAGTGTGGCAAATACTGGCAACAATAGTTCACAGAACACTTTAAATGCAAACGACACGCAGCAGATTTACAAAGgatttcattgtggtaaataTACAAGTGGGATAAATGTGAATGCaaagaatcaaataaaaatattggaaatgcAGCAAACATTCTTAAGACATCAACAATCGGAAAATAGCAATGGTAATTCATATTTTGCAAGTAATAACTACAATGAGCgccatcagcagcaacaaatatCGTTTGAAGCTAACAAGTCAGTGCTGCAGAACGTTCCAAAAGAAcgattgcagcagcagcaattaccTTACGACGCAAGTAAATCGGTACAGCAAAATATTGCAAAGGAGCATCATCCACAACACTACTACCAACAACTGCAGCACCACGTCAGTGAAATGCCGCACTCAACAAATGAAGGCTCGGCCAGTAGAGCAGTGAATAGTGGTAATGGTAATGCAGCATTAGCAGCAAATGATGATGGTAATTTTAAGATACCATATCCACACAGTTCAACATCACCTCAAAAGAATCTCTATTGCAAAAGTAATCCAATGAAGACCAATTCCAAATTGCCGATAAAAGATATGAATCCAAGGCAGCAATTGCACGTCGATTTAGACTCTTATATGAAGCTACGAAAACGTTATGTAATACTGCAGCGAAAATGCAAAAGCCTGCTGAAGTCACATCAAAGTCAAAGTCCTGGTGCCAAAAGACAAAGAAATTGCAAAACCAACTCAAAACGCCCAAAATGCATTTGTCGCATTTGCATGAAATCCTGCCCAACAATCTACCATCTGCTGCGTCACAAGCAAACATCGCATCGCATACTCCCGCCACCTACACATTTTTCTGCCAGTTGTGGTGGCTGTGAGAAGTTCTTTCGCAGTAAAATTGCACTGAAAAATCATACACGCTACATTTGTCAAACATTATCCTTGCGTTGGTTTAAGACATTCAAATGTCGCTATTGCCGCAGCATAACATTTACACATTGGCGTCTGTATCGCAAGCATGAGCTGAAATGTaaacagaaaatgaaatgtGCCACTCTTCAACACCACAAACGAAAACAACAGACAAATAGTgctaaaagaaaacgaaaatcttCTAAGCAGCAACATCATTCACTTGCTCCTCCATCAGCTAGCCAACAATATGCTTGCGCAATTTGTTGCAAAGTATTCGCAAAAGAGCATAATCTGAAACAGCACAGCATTACACACGTTCCGCAACCAAGAGATCATAAATGTGACTTGTGTCAGCGCATGTTTCAACGTCGCAATGCGCTGACACAACACATGAAATGTGTGCATTTCCAGCTAAAATCGTTCGCCTGCACAATTTGCAGCAAAATATTCGCAAACTCGAACAGTCTCAATCAGCATAGCATCACGCACACGCAACAGCGAACACATAAATGTGGCTTGTGTGGGCGTGTCTTCAAACGTCGCAATGGACTCACGCAACATATGAAAGGTTATCACTTGCAGCTAAAACCATTCGAGTGTCCTGAGTGCCATCATTCGTATGCGCTGAAATGTGATATGCTGCGGTGCCGCCATTCGGTGCTACTGCGTGCAGCAGCTGAGGCCCTAGCGTCCGGCGCTAGCAAGAGATAG
- Protein Sequence
- MPSSCAVLNCKDKYGHKENISFHKFPIKRQNLLEKWLEFAERGATWQPSKWSAICSRHFRDEDFNCANERKTLKKTAVPSIQVFQQLCEHRLNVGFAVQKDTVQKATATTTTGAEKGVEETELEQEEAQMAVLDHIAPGNSLPKVNCRFCGIASITTAVVTFATNFEIYGMIQKCFPTLNIQQDDNLPKDICRLCLKRLENFSRFIDKVCETQSELQRKFRIEKSNCKTAERQQLKIKQEPVVRVKQEVAEGFESFLSDDMDMGVDDSCEQGDGGGSVESASAVEQKFDFCDFPILNAQDIINNCDIMEIINLDDPFINIPDDDANTNCDSSATAQLPTPTPTPASAATTAMNANSLAKRPFPSAHELLQSHLLIEEHNYANAAEDFKEEWQIKNYYKTEKDDDYEQEEAEDVGNAEHEEDYQNYGLEDNGAVNASVNMISASCENRSLKPIVTSVSAIAERRLQFPPLDNAATPTDTGKPVVTAVNDLRTMKQHEPQTYVKSHNKPNIVVLNESIVKSAPAFQLHACNCCQLTFFSTESLNQHYNAVHAQMPMVSVPSINIWENGHSERAGGTGAAYVENCKIEEGYNSKEATLIAGRSVANTGNNSSQNTLNANDTQQIYKGFHCGKYTSGINVNAKNQIKILEMQQTFLRHQQSENSNGNSYFASNNYNERHQQQQISFEANKSVLQNVPKERLQQQQLPYDASKSVQQNIAKEHHPQHYYQQLQHHVSEMPHSTNEGSASRAVNSGNGNAALAANDDGNFKIPYPHSSTSPQKNLYCKSNPMKTNSKLPIKDMNPRQQLHVDLDSYMKLRKRYVILQRKCKSLLKSHQSQSPGAKRQRNCKTNSKRPKCICRICMKSCPTIYHLLRHKQTSHRILPPPTHFSASCGGCEKFFRSKIALKNHTRYICQTLSLRWFKTFKCRYCRSITFTHWRLYRKHELKCKQKMKCATLQHHKRKQQTNSAKRKRKSSKQQHHSLAPPSASQQYACAICCKVFAKEHNLKQHSITHVPQPRDHKCDLCQRMFQRRNALTQHMKCVHFQLKSFACTICSKIFANSNSLNQHSITHTQQRTHKCGLCGRVFKRRNGLTQHMKGYHLQLKPFECPECHHSYALKCDMLRCRHSVLLRAAAEALASGASKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -