Pscu004182.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Palloptera scutellata
Gene Symbol
RREB1
Assembly
GCA_958295655.1
Location
OY282449.1:115650119-115656428[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.037 1.9 9.1 0.7 1 21 277 297 277 299 0.95
2 13 0.00057 0.028 14.8 0.1 1 23 309 331 309 331 0.98
3 13 1.4e-05 0.00069 19.9 5.2 1 23 337 359 337 359 0.98
4 13 0.67 34 5.1 0.0 2 23 609 632 608 632 0.94
5 13 0.1 5.2 7.7 0.4 2 19 638 655 638 655 0.97
6 13 0.013 0.67 10.5 0.1 1 23 860 882 860 882 0.97
7 13 2.8e-05 0.0014 18.9 1.2 1 23 892 914 892 914 0.99
8 13 0.0012 0.059 13.8 2.0 1 23 920 943 920 943 0.97
9 13 0.0014 0.068 13.6 2.1 1 23 1305 1328 1305 1328 0.95
10 13 0.00012 0.0062 16.9 0.3 2 23 1656 1677 1655 1677 0.97
11 13 0.15 7.5 7.2 6.5 1 23 1683 1706 1683 1706 0.97
12 13 0.12 6 7.5 1.1 3 23 1900 1920 1899 1920 0.91
13 13 0.013 0.66 10.5 4.8 1 23 1926 1948 1926 1948 0.99

Sequence Information

Coding Sequence
ATGCTTGCAACACAAGCTACAACGACTAATCCATCACTTGAGAATAACAGAAAGGCAGCAACGGCCGTCACGTCCATCAAAAGGGAACGCCGCGATTCGACAACATCCGAATCATCGTTGGAACATTTAGATTTGGGACACAcaccaaaaaaatttcaatcgcTCACATCGACTACATCGACACCGCATATCGCCAACGGTGTTGGTGGTGCTAATAGCAGCATCATACATAACAGCAATAACAGTAATGTAACTGCCATTACTGCTGCCGCCGTTGGTGAATGTGCCATTAGCATCACCAGCGCTACCACACTAGTTATAGCCGATGCTCATAAGAAGCAGCCTGTAGCGTCACGTTTGCAACTACGCATGCAGGACTCAGACGATGCCAACGACTACGACGAGGATGAATCTGCCGATGAGAAACACAGTTCTACCATTGTAGCACGACCGCAGCGCCATCACAAGCGGCGACGCCTCGACAAACGTGCTAGCGTGCAATTGGAATACAATCCTGATAATCCGAACTCGTTACGTAAAAAGTTTCGCTTCAATCGCAGTTCTGCGGATGTTgcaacagcaagcggaacttcGCTCACAAACAACGAATCCGGTTTCGTTGATGCCAGCTGCAGCAGCCAATATCTGAACGCATCGGCAGCGGGCAGCACAACAGCGACCGGTGCACAACAGTCACAAGCATCTCCACGCACCTCCTCCTCCACATCTGCATCGCACAGCTCATCGTCAGCGTCGTCGTCGCCACATGGCGCGGGTGCTGGCGTCTCAAGTCCTGAGTCGGGCATTGGTGAGCGGGAGGACATGAAGTTCGTGTGCCCAATATGTGAGGTAGTCTCGGGAACACCGCACGAGTTCACCAATCATATACGATGCCACAATTATGCCTCGGGTGATACCGAACACTTCACATGCGCCATTTGTTCGAAGGTGCTCTCATCTGCTTCATCGTTAGATCGTCATGTACTCGTGCATACTGGTGAGCGGCCCTTCAATTGTAAATACTGTCAGCTCACCTTTACCACCAATGGCAACATGCATCGTCATATGCGCACACACAAACAGCATCAGCACAATCATCATCGCCGCAACTCGAATGGAACAAAgaataataacagcagcagcgccgccaacaacaacagcaacaacaataatatcagcatCAACAACACAAGCGTGGTTGGAACGACGACACAAACAACACCTGTCACTGAAGCGTCGTTATCAACTTCTACACCCGCCACCGCCGTTACCGCCGTTACCAACGCTGCCTTAGCAACTACCACTTACGCTCAATTAACCAACGGCGGCATCAATGAGCGAGGTGTTAaaacagcatcaacagcaacaacaacaacattgtcgACGgccgcagtagcagcagcagctgcaggtGCTAATGGTAAACTCTTAAATGGTAGCGGCGTAGAAAGTTACGAAAGTGATGGCGGTTGCTCAACAGATTCGTCAAGTAGTAACATCAGCCAAGGCTCAAAcaatcataacaacaacaataataataacaataataacatgaaagccaacaacaacaatagtagtAGTACCAGTAacaactacagcagcaacaacaaaaataacatcaTAAACAATGTTAGCAACGTTAAACGCAAAAACAGTGATCAACttgatgttgatgatattgCGTTGATGAAGCGACGCGTGAAGACCACAATTAACAATAATACAATTGGTGCTAGTGATGAAAACCACCAGCAAAAACCACATCAGCTCAACAGCGCAGCTGATGTAGCGCCATCTGGAATTGATGAACAACGCGCACCACTCTACTGCCCCGTCTGCAGTGCGGTGGTTTTCCCCAACATGTCTGCACTCAGTGTCCACATTGAAACGGAGCATTCAGACATACCAGCTAAATGTCGTTACTGCGGCTCAATATTTCGGTCGTATCGCCAACTCAACGTACATCCTTGCCGGCAGAAACCAAAAGCTAAAGTCGGACCCAAAGATCTCTTATCGAATCCCGATTACTCCTGTGTGATTGCAAGGCCATTGCCCAATCAGCGTTTCGATTGCGCCAAATGCTTTTGTACATTTCTGTGTAGCAGCGACTTGGAAACACATGAGCAGGAATGCAGTAACGAAACATTACATTTAGATCGCATGAAACGGCGCAATCTGAGTGAAAGCTCCGCCGGTGGTGAAGAGGCCGATGAGGAACAGCAGCGCCGTGAATTCTTTCGCCAACTCTATCTTAAAAACAAAGAACTGCACACAAATAACATGAATTCGATGTCATCGCCGCAAAATTCGGGTGATGAAAACCTTGAAACTATAAAGTTAGAAGATGATAATGAGAAAATATCGCATAACATATCACAGCAATCGCATGATTCCAAGGATCTCGCGGATATTCAGTCAATTCTAAATATGACGTCGTCATCGTCTACCTCAAACTTCTTCAAAAACTTTGAGCAATCAGTAAATACGCCATCTAGCAACTACAGTCTCGACAAGGACGAGGAGGAGGCACAAGATGTCTTCACATCTGAATTCAGGAAGATGAAACTGCGCGGCGAGTTTCCTTGCAAGCTCTGTAGTGCAGTGTTTCCCAACTTACGGGCTCTCAAAGGTCACAATCGTATTCATTTAAGTGCCGCTGGTCCCGCCGGGCCATTCCGCTGTAACATGTGCCCATACTCGATATGCGACAAGGCCGCCTTAGTGCGGCACATGCGAACCCATAACGGCGATCGTCCCTACGAATGTGCCGTATGCAATTACGCTTTCACCACAAAAGCGAATTGCGAACGTCATTTACGCAATCGCCATGCTAAGACAACACGTGATGAAGTTAAACGTGCCATCATATATCATCCATCCGAAGACTCTTCGTGTGATGATACCACTAAGAAGATGCATATGTTCTTATCGCctgattttgatgatgattcgGATTATCAGTATCAGCATCAACAGCCGAAAGATCGCTCTACACCAGTGTCACATTTGAAAGAAATGCTGACTAGTGAAAGCCCCACATCGAAGCCAATGATACAAGTCAAGAGCTTAGAACAATTGCGTGATAAGTCCACAAGCTCTGCCACATCATACAACGAAACCTACAATGATCAACAAGCACAAATTCAACGAACACCAGATACCGCGCCCATCGACCTGAGCATGGATGTTTTGGATTTAAGTAAAAAGCCagctataaaagaaaaaactgaaaaaagagaaagagagctTGCAATTGAAAGACGTCCAGAAACCCCGCCAGCTCCAACATTGGTGCCAGAATCCATCAGCATACCCCTTGGTGGTCCAACAATTGGTGATGCCAAGTTTGATTTGTCTAACTTGGAAAAGAACCAACAGTTActactggcacaacagcaacTCATGAACGACACAATTCCGAAATTAGACCCGGCtcattattttcaacaattcTATCGCAACCTTGTCTTTCCCCCTCTTAATCCATTTTTCCTTCAAAGCCACTTTTTGCCAAATAATCTCAATGACTTACAGAAATTTGCTCCGCTAATGAGCAGAATGTTTGGGGCAGCTCCACCAGGAGCACAACCTCAATTGTCAAACATTGATGTAAAAAAAGGAACCGGCACAAATGCATCATCCAGTCCCGCACCGTCTATGTTGCCACAAGTAAGTCCACTTATGTCGGAAAAACCGGGTACACATTCGTTTTCATCACCCGCTCCTGCATCAATAAATCAGTTACTGCCCAAATCGTTAACATCTGCGGCATCTTCAAATGCCTCACTAAGCATTTCTCGACACTCCCAAATTCCGCCAACTGTACTCCCAGGTGGACCAGTTAAAATGGTCCTCAAGAACGGCGTATTTATGCCGAAACAGAAACAACGTCGATACCGCACAGAACGCCCCTTCGCTTGTGAACATTGTTCCGCACGTTTCACACTTAGGTCAAACATGGAGCGCCATATAAAGCAACAGCATCCAGAATTCTATGCTCATCGCCAACGAAGCGGACATCATATCATGCGAGGACGCGGGGCCAGCAGTGCTGCAGCAATGAATAATATTACACATTTACAAGCCGCTTTTGCTCAAGCTCATAATAATAGCGGCAGCGGAGGGCACATGAATTCTCCTCCCATATCTGATCAAGTGAAATATGCAATATTGGCGCAGCAACTTAAGGCTCGCAAAGATACCGATTTGCTCCAACAAGCCTTGGCGCACGGCTCTAGTAGCGTTTCGTCTAATCACATGCTACTAAATGCAGCAGCTGGAGCCGGAATACAGCCGCTACCAAATGGTCATCAGCTCAACCTTTCTCACCATTTGAGCAGTACTAATACGAGTGGAGGCTTGGTGGAGGACGATGAGCCCAAGTTGATCATAGATGAGGATGATGATTACGATGATGTGGAGGAAGTTCATGATGAAAATGAAGATGAACAGCAGGAAAATGAGTTAAATGACAGCATTTCGGAAGACCATCTGCCTCTGCAGGCTGATGAAGTTAAAGAGCAAACATCCGAATCTAATGAAGCAGCCAAGAAGGTAGCCAAAACTATACTTGAAGAAGCAATCAAGGAATCCACACACAAATCGTCCAGTACAATAGTCAAGCCTGAAGCCCCGGGCCCACCTGCCAATAGCATGAAATCAATGATAGCTCAAGCGGAATcagttggaaaatttttaaaagaagttGCGAGTTCGCCTTTCAAAGATGAATCCCAAGATCTTGTATCAGTATCAAAGTTAGTAGACAATGCCACTAGCAATGCTGTATCATTCAACAATTATTTCCGACCCAGTGATGTAGCCAATAACATGGAACAGAGTGACGAAGAAGGTCTGGTGGCGTCAGGCAGTGCTAGTGAAAGCAATAACTCAGGCACCGAAGATATTGCCACATCTGTCGAGCCCAAAAAGAAGTCAGCCTACAGTCTGGCACCGAATCGGGTTTCATGTCCCTATTGTCAACGTATGTTCCCATGGTCCAGCTCGCTGAGACgccacatactcacacatactgGGCAAAAGCCATTCAAATGCTCACATTGTCCGCTACTCTTCACAACAAAAAGCAATTGTGACCGACATTTGATGCGAAAACACGGCAATGTCGAGTCAGCCGTATCAGTTTATGTCCCTACCGAAGATGTCAGCGAGCCTATACCAGTGCCGAAATCCGTAGAAGAAATCGAACAACAACAGCGTCAACGTGAAGAAGATGAACGGCGGCGTAAGGCGGAACAAGCGCAACAGGATCGCGAACGCCGCGAAAAAGAAAATCGTCAACAACACGAGcaggaacaacagcagcaattattGTCTCAGCTCGCTGCTGCACAGATCAACCAACTCAATGCAGTGGCGGCAGCTGCCGTCAACAGTCAAAACCGCCTCGATATTAATACGGTCTCATCTTCTGATCTGCCATTTAAATGTCACCTTTGCGAGAACTCTTTCGGTGAACGTATCCAATGCTTGGAGCACATTAAGATTCAACATGCGCGAGATTTTGCACTACTCCTCGCCAAAGGTGCCATCGACACTGATGCTGAATCTTCACAGTATTCGCACCACAGTGAGGACATGGAAGAACGACGCGCTCCCACCATAGGTGATGACAGTAACGGCGAACGAGTACGCACCGGTGGAAGATATCCCGACTATAGCAATCGCAAGGTCATCTGCGCATTTTGTATGCGACGTTTTTGGTCAACGGAAGACTTGCGACGTCACATGCGCACACATTCCGGTGAACGCCCATATCAGTGTGAGGTGTGTATGCGGAAATTTACGCTAAAGCATAGCATGCTGCGTCACATGAAGAAACACGATGAAACCCAAAATCACAATGGTGGCAGCGCGACTGGCGATCTATCAGCCGCAGGCAATAGTGGTTCAGATTTCTCTGACGATGAACAGACCTCAAGCGCAATAATGCCCACCGCCACAACGCCAGCAAATCCGAATGTCTCAAATGCGCTGCGTGCACCGAAAATACAAGAGCTGCTGAGCAAAGCAAACGAATGGCGTACGAGTCGTTTGGCAGCAGCATCAACGCTGGGAGAGCAGAAAGAGAATATAGCCGAGGAGCCAAACAATCAGAGTGATCTTATTGGAAACTTGCTGGGCATAAGCGATCAAGGTATATTGAATAAATTGCTCTCATCAGCAGATGAGGCGGCAAAATTTTTGGGCGTGGAAAAGTAA
Protein Sequence
MLATQATTTNPSLENNRKAATAVTSIKRERRDSTTSESSLEHLDLGHTPKKFQSLTSTTSTPHIANGVGGANSSIIHNSNNSNVTAITAAAVGECAISITSATTLVIADAHKKQPVASRLQLRMQDSDDANDYDEDESADEKHSSTIVARPQRHHKRRRLDKRASVQLEYNPDNPNSLRKKFRFNRSSADVATASGTSLTNNESGFVDASCSSQYLNASAAGSTTATGAQQSQASPRTSSSTSASHSSSSASSSPHGAGAGVSSPESGIGEREDMKFVCPICEVVSGTPHEFTNHIRCHNYASGDTEHFTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQHNHHRRNSNGTKNNNSSSAANNNSNNNNISINNTSVVGTTTQTTPVTEASLSTSTPATAVTAVTNAALATTTYAQLTNGGINERGVKTASTATTTTLSTAAVAAAAAGANGKLLNGSGVESYESDGGCSTDSSSSNISQGSNNHNNNNNNNNNNMKANNNNSSSTSNNYSSNNKNNIINNVSNVKRKNSDQLDVDDIALMKRRVKTTINNNTIGASDENHQQKPHQLNSAADVAPSGIDEQRAPLYCPVCSAVVFPNMSALSVHIETEHSDIPAKCRYCGSIFRSYRQLNVHPCRQKPKAKVGPKDLLSNPDYSCVIARPLPNQRFDCAKCFCTFLCSSDLETHEQECSNETLHLDRMKRRNLSESSAGGEEADEEQQRREFFRQLYLKNKELHTNNMNSMSSPQNSGDENLETIKLEDDNEKISHNISQQSHDSKDLADIQSILNMTSSSSTSNFFKNFEQSVNTPSSNYSLDKDEEEAQDVFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSAAGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDTTKKMHMFLSPDFDDDSDYQYQHQQPKDRSTPVSHLKEMLTSESPTSKPMIQVKSLEQLRDKSTSSATSYNETYNDQQAQIQRTPDTAPIDLSMDVLDLSKKPAIKEKTEKRERELAIERRPETPPAPTLVPESISIPLGGPTIGDAKFDLSNLEKNQQLLLAQQQLMNDTIPKLDPAHYFQQFYRNLVFPPLNPFFLQSHFLPNNLNDLQKFAPLMSRMFGAAPPGAQPQLSNIDVKKGTGTNASSSPAPSMLPQVSPLMSEKPGTHSFSSPAPASINQLLPKSLTSAASSNASLSISRHSQIPPTVLPGGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPEFYAHRQRSGHHIMRGRGASSAAAMNNITHLQAAFAQAHNNSGSGGHMNSPPISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVSSNHMLLNAAAGAGIQPLPNGHQLNLSHHLSSTNTSGGLVEDDEPKLIIDEDDDYDDVEEVHDENEDEQQENELNDSISEDHLPLQADEVKEQTSESNEAAKKVAKTILEEAIKESTHKSSSTIVKPEAPGPPANSMKSMIAQAESVGKFLKEVASSPFKDESQDLVSVSKLVDNATSNAVSFNNYFRPSDVANNMEQSDEEGLVASGSASESNNSGTEDIATSVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLMRKHGNVESAVSVYVPTEDVSEPIPVPKSVEEIEQQQRQREEDERRRKAEQAQQDRERREKENRQQHEQEQQQQLLSQLAAAQINQLNAVAAAAVNSQNRLDINTVSSSDLPFKCHLCENSFGERIQCLEHIKIQHARDFALLLAKGAIDTDAESSQYSHHSEDMEERRAPTIGDDSNGERVRTGGRYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPYQCEVCMRKFTLKHSMLRHMKKHDETQNHNGGSATGDLSAAGNSGSDFSDDEQTSSAIMPTATTPANPNVSNALRAPKIQELLSKANEWRTSRLAAASTLGEQKENIAEEPNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01470824;
90% Identity
-
80% Identity
-