Basic Information

Insect: Palloptera scutellata
Gene Symbol: ham
Assembly: GCA_958295655.1
Location: OY282452.1:16512491-16560791[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.34 17 6.1 0.0 2 21 391 410 390 413 0.84

2 9 0.02 1 9.9 2.2 1 23 420 443 420 443 0.92

3 9 2e-07 1e-05 25.7 2.4 1 23 449 471 449 472 0.96

4 9 6.3e-07 3.2e-05 24.1 0.6 1 23 478 500 478 500 0.97

5 9 6.6e-05 0.0033 17.7 5.0 1 23 506 528 506 528 0.99

6 9 0.00031 0.015 15.7 1.1 2 21 536 555 535 556 0.95

7 9 1e-08 5.2e-07 29.7 1.3 1 23 1181 1203 1181 1203 0.99

8 9 5.5e-07 2.8e-05 24.3 0.9 1 23 1209 1232 1209 1232 0.97

9 9 9.5e-05 0.0048 17.3 6.6 1 23 1238 1260 1238 1260 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.34	17	6.1	0.0	2	21	391	410	390	413	0.84
2	9	0.02	1	9.9	2.2	1	23	420	443	420	443	0.92
3	9	2e-07	1e-05	25.7	2.4	1	23	449	471	449	472	0.96
4	9	6.3e-07	3.2e-05	24.1	0.6	1	23	478	500	478	500	0.97
5	9	6.6e-05	0.0033	17.7	5.0	1	23	506	528	506	528	0.99
6	9	0.00031	0.015	15.7	1.1	2	21	536	555	535	556	0.95
7	9	1e-08	5.2e-07	29.7	1.3	1	23	1181	1203	1181	1203	0.99
8	9	5.5e-07	2.8e-05	24.3	0.9	1	23	1209	1232	1209	1232	0.97
9	9	9.5e-05	0.0048	17.3	6.6	1	23	1238	1260	1238	1260	0.98

Sequence Information

Coding Sequence: ATGCCTGTTTACCTGACCTTTGCGCAAGGCAGCAGCGGTGACGAATACGAGCCCGGTGTGCGGCATCTTAATATAGCACAATTCGCTGCGCATAGCCATCACactcatcataatcatcatcatcatcatcctcacaGTCATCAGCATACGGCAGTGCCACCGGCAGCACCTCCACCACCGCCGCCATCACATTTAGCGCTGCCGTTAACACCAGCGCACCATCAATTGAACTTTGAGGCTGAGCAGCGTAAACAACAGCAAAGTAGTGCAACAAAGTATCTACACAACGGTGGACATCACAGCTACTGCGAATCACCGCAACATTCGCCGCCGCCATTGCCACCATCAGGACTGTCATCGGTGAATGTATCACCAACTACAGCTGCCGCAGCAGCTGTGAATCTTCAATTGCAACCACACCAACAGCACCCGCCCACACTACACAACATGGATCAATTGCTTAGCAATAAAATGCAAGCGGAGCGTTTTCTCTCCGAGATGGCGCGTCTGCAAGAGCCGATCTGTGATCTCGATATACGCGAGACGGGTGTCTTTGCGAAAGTGGCGCTGTCGCGCGGCAAACGCTACGGCCCCTTCGGAGTGAAGTTGTGCCCGGAGCCAACGGAGCGGAATCTAGCATGGGAAgttaTTGCCAGTCCACATTTTCGCGGATGGCTGGAACCGCTGCCTGATGTCTCAACGTGGTTAAAGAAAATACGTTTGGTGGATGCAGAAGGCGAGGCAAATCTAAAGAATTTCCTAGTACATGGATATCTTTGGTATGAAACTAATCGTGATATAAATGCTGGTGAAGAAGTGACTATCGATGGACGGCCAAAGACGCCAATCCAATTAAACGATGGAATTTCAAATGGTGCTGATCAACAATTGGGCGGCGGTAGTGGTTCAATGCATGGTGACGACAGAAGTGAACGTGATAATGACCCCATGGGACACTCCATCCAGATGAGAACACAGGATGTCATGGGCTCACTGTATCATCGATATGAAAACCATGCACAGGTTAAACTCTGGTCACATTCTGCCAATTATTATCCAGGATCTCTATACAGTGGAAATACCACAGGCGACGACGAATTCAGCAAAGAGAAATCACTAACGGAACATCCTGATAACGATTTGACAGACGACGAAAACGGTTTTGATATACGCTGTGAAGTTTGTGATAAAACCTATGTGGAATTGGAACGACTCGACGATCATTTAGTTGCAACACACCATTTTCGAAGGGACGAATTCGCTTGTGAGCTGTGCGCCAAACGCTTCTGTCATCGCCCGTTATTGCTAAAGCATCGTGCATTGGTTCACAACGATATACGAAAGTATCCTTGTGAAAATTGCACAAAGGTATTTTGTGATCCATCGAATTTACAACGGCATATTCGTGCCCACCACATCGGCGCTAGAAGTTACGCGTGCCCCGAGTGCGGAAAAACTTTTGCGACATCGTCGGGCCTTAAGCAGCACACCCACATTCATTCGTCGGTGAAACCGTTTCAGTGTGAAGTGTGCTTCAAAGCGTATACGCAGTTCTCGAATTTATGCCGCCACAAGCGAATGCACGCCGATTGCCGCATGCAAATCAAGTGTAATAAGTGCGGTCAAAGTTTTAGTACGGTCACGTCGCTGTCGAAGCATAAGCGTTTCTGTGATTCAACCAACGTACCGTCGACAGTTGCAGCGGCCGCagtagcaggagcagcagcagcagcaggagaagcagcagcagccgccgcAGCAGCAGCCGGTGTACCACTGTCACCAAtgcaaacagcagcagcagcagcgtatTTGTCACAGCAGCACGCGtcacatcatcagcaacatcacaGCCacaatcatcatcagcagcagcaacatcagcgcGAGCAACAAAACCATCACGCAGCGCAACAACAATCGCGCGTCGCTGCATTACAATCTCTGAACGCTGCCGCAAACGCTGCAGCATTACAATCTCTAAAAGCTGAGGCTGGCATTGGTCCGAACGCAGCCATGGCCACACCAACAAATCCATTCTTTTTGTTTCCTATGCCGCCTGCATTTTTCCGGGGATTCCCCGGCGCTTATGGTTTGCCGGGCATGTTTCCACAGAGCCCTGCACAATCACCCAACTTCTCATCGTTCTCTAAACCGAATCTCGATATGAGAataccaccaacaacaatgcaacaacagcatcagcagcaacctTCAGCAAATCACAAACAACCAAATTTACATTCACCAACCAATTCATTTCGGCATCACATGAGTTTCGGTAACATTGGTGAATTAATACGCGCATCGCCAACGTCGAGCCTCATCGCTGGCAGCGGCGGCACTGCCGATGCTACTGATCAAAAGCTGAACTCTAATGATGGTCACGATGAATTGGATACAAAACCATCGAAAATGCAACTTACTTTAGAAGCTTATAGCAAAGCCTTTTCATATAATGCCTCGCCCACATCGTCGTTGAAgcataaaaataacattttctcaCCATCACCACCTCGACGCATTGCCGCGTCGGATGAGGAGGATACGCGCTCATCAACGGCTGACTTGAAAATTGAACCTGCCGATGATGGAGATACGCGTCAGAAATCGTTGAACGAGGGCAAACATTTGGAAGATGATAAGaAATCCATTGACGTAATTAGCACCCCACCTCCAgtcgacgatgacgacgacgtcgatgaaaataacgataacaacaataataacaacaacgtcAATACTGATGACGCAGACGACGAAAATACCGACGTCAAGCAAAGAAGCATTGCGGAACTGCCATTGGATTTAAGCGTTAACCGGAAACGCCAACGAACGGTCAGCAGCTCCAGCACAATAGccgaaatcaaatcaaatcacaGTGAACGCAATCACCGACGATCCACGAATATGCTGCTGTTGGATGACGAATTGCCAGAAGATTCTAACTCTGAGCAGGATGTTAAGCAAACAATTCCACTGAAGCAGCGGCGTGCATTAAATGCTCCGCTGCCGCAACCAAATTCGCCACGTCACTCCTACCAAGACAGTCCAACACCGTCGGCATCACCAGGACCAACACCATCACCGTCACCACCGAGCAACAACGGTACATCTAGTGCCGTTGCAGAAGTTGCAGCCAATGGAGGAATACTGGGCGCAGGCAGCCGAAGCGGCAGCGGAAACGGCGGGGGTATCGTGGGCGGTAATGCAGGAGCAGTCGATGCTGGAGCAGCATCCGCATCCGCATCAGCGTCGGGCATCTCATGTCCGCAACCTATACACCCAATGCTATTTGAAGAAATTTATCGCTCACGCGCATTCGGCGCTGCATTTCAACGTCAGTTTCCTTTTTTAGGACCAATGGGCGGACGGCCAGCCTTTGATCATAGGCTGCACGCACCACCGCATCACCGCAGTGCGGCGCCGTTTCCGCCCGAGCCAGCTTTCCGCGATGCCTTACGCGCTGTCGGCCTTTCAACAGGCATGCTGACCTCGACGGCGGCGGTCACATCGATTACCGGCAAAATTAAAGACCGCTACACTTGCAAGTTCTGCGGCAAAGTATTTCCGCGCTCGGCCAATTTGACGCGCCACCTGCGCACGCACACCGGCGAGCAGCCGTACACGTGCAAGTATTGCGATCGCGCCTTCAGCATCTCCTCGAATCTACAGCGCCACGTACGCAACATACACAACAAGGAGCGTCCTTTTCGTTGTCACCTGTGTGATCGTTGTTTCGGACAGCAAACAAATCTGGATCGTCATCTGAAGAAGCACGAAGCGGATACCAGTGGACTGGGTATCGGTGTTGGTGACTCACCGTCATCGAACGAGGCTGATCGTGAGGATTCATATTTCGATGAAATACGTTCATTTATGGGACAGGTGACCTACAATGAGGATCTATATACGCCCACGAGTATAGGAGGAGCAGATAACACCGACACAGATTATGCGGGCAGTGATGCGGAAAATGAACTTTCCGTGTCCCGGTCGTCTTCGGCAGATGTAACGCTGAATGCAACCGTGGCAGCGGCGGCAACAAAACCACACCACAGCGACGATGACAAAGATGCGTGCGAAGGCGGCAGCAGCACAGCCGCCGAAATTGACGACTCTGCCCCGACAACTACGACCACCACCTCACTCAATAACAATGAAACGATTGAGGTGAGCTCGTAA
Protein Sequence: MPVYLTFAQGSSGDEYEPGVRHLNIAQFAAHSHHTHHNHHHHHPHSHQHTAVPPAAPPPPPPSHLALPLTPAHHQLNFEAEQRKQQQSSATKYLHNGGHHSYCESPQHSPPPLPPSGLSSVNVSPTTAAAAAVNLQLQPHQQHPPTLHNMDQLLSNKMQAERFLSEMARLQEPICDLDIRETGVFAKVALSRGKRYGPFGVKLCPEPTERNLAWEVIASPHFRGWLEPLPDVSTWLKKIRLVDAEGEANLKNFLVHGYLWYETNRDINAGEEVTIDGRPKTPIQLNDGISNGADQQLGGGSGSMHGDDRSERDNDPMGHSIQMRTQDVMGSLYHRYENHAQVKLWSHSANYYPGSLYSGNTTGDDEFSKEKSLTEHPDNDLTDDENGFDIRCEVCDKTYVELERLDDHLVATHHFRRDEFACELCAKRFCHRPLLLKHRALVHNDIRKYPCENCTKVFCDPSNLQRHIRAHHIGARSYACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCNKCGQSFSTVTSLSKHKRFCDSTNVPSTVAAAAVAGAAAAAGEAAAAAAAAAGVPLSPMQTAAAAAYLSQQHASHHQQHHSHNHHQQQQHQREQQNHHAAQQQSRVAALQSLNAAANAAALQSLKAEAGIGPNAAMATPTNPFFLFPMPPAFFRGFPGAYGLPGMFPQSPAQSPNFSSFSKPNLDMRIPPTTMQQQHQQQPSANHKQPNLHSPTNSFRHHMSFGNIGELIRASPTSSLIAGSGGTADATDQKLNSNDGHDELDTKPSKMQLTLEAYSKAFSYNASPTSSLKHKNNIFSPSPPRRIAASDEEDTRSSTADLKIEPADDGDTRQKSLNEGKHLEDDKKSIDVISTPPPVDDDDDVDENNDNNNNNNNVNTDDADDENTDVKQRSIAELPLDLSVNRKRQRTVSSSSTIAEIKSNHSERNHRRSTNMLLLDDELPEDSNSEQDVKQTIPLKQRRALNAPLPQPNSPRHSYQDSPTPSASPGPTPSPSPPSNNGTSSAVAEVAANGGILGAGSRSGSGNGGGIVGGNAGAVDAGAASASASASGISCPQPIHPMLFEEIYRSRAFGAAFQRQFPFLGPMGGRPAFDHRLHAPPHHRSAAPFPPEPAFRDALRAVGLSTGMLTSTAAVTSITGKIKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYTCKYCDRAFSISSNLQRHVRNIHNKERPFRCHLCDRCFGQQTNLDRHLKKHEADTSGLGIGVGDSPSSNEADREDSYFDEIRSFMGQVTYNEDLYTPTSIGGADNTDTDYAGSDAENELSVSRSSSADVTLNATVAAAATKPHHSDDDKDACEGGSSTAAEIDDSAPTTTTTTSLNNNETIEVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -