Basic Information

Gene Symbol
ncor1
Assembly
GCA_958295655.1
Location
OY282449.1:80639886-80643494[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-07 0.00018 21.5 0.0 3 43 759 799 758 801 0.97

Sequence Information

Coding Sequence
ATGCATCAGCAGCAAATGCATCtccaccaacaacagcagcagcaacagcagcatcatcaccatcatcatcaacagcagcagcagcaacaacaacagcaacaacaaacctCACGTTCAGCGGCTAGTCCCCTATCCCCACCACGCCCCGGGCCTGGttcagctgctgctgccaaTACGTACGCCAAATTTGCTGATGTTAACGCAGTACGTGAGGCGCCACATCGGTACATACAGCAAAGTTCGTATAGTATTGGACCTGGTACACAATACCGGGACAGTCCTTATACGAGAATACCTCAGATGCCGCCAGCACAAGTTCAGGAATTTCATCGTGCTGCAGCGGCCGcagtggctgctgctgctgtttcggGTGGAAATGTGTCAGGTGGTGTAGTACAAGCACCTAGCGGATTGCCACCGCAGTCTCAGGTTAGCGGAACACATCTGGAGACGCTACACTTTTCACACCAGCCACCACCCTCAGGCCAAGCTGTATCAGCAGCTCAGTTGCACAGCAACGCTGGCGGTGGCGGTAGTGGCAATTCTGGCGGTGCTCCATCGCCACATAATTCCAGCGGTAGCAGCATAATGGTTGCGAGGCAACGTATTTTACTGCCACCACACTCACAGGCTCCGCAATTTACAAATGAATATTTAACGAATGCATCTGTGGCATCCGCCAAtcgtcagcagcaacaacaacagcagcatcagcaacaacagcaacagcagcagcaacaacagcagcagcatcagcagcaacagcatcaacaacaacaacagcagcagcagcatcagcaacaacagcaacagcatcatcagcagcagcaacaactacaacaacaacaacagcagcagcaacaacaacagcagcaccagcaacaacaacagcagcaccagcaacaacaccagcagcagcaacaacaccatcaGCAGCATACGCAGCAACCACAGGGTCCACCGGATCCTGGAGGAGCGCAGCCCTACAAAAAATTGCGCTTAAGTGAAGTAAATGCCAGCAATATAAATCACCTGCCACCACAACTAGCGAATGCACATCAACAGCACCAGCatcaacaacagcgacaaccaTCACCAGCTGCATCGCTGGTGCAAGCAAACAGTGGTCGTAATAGCAGTCACATGCCCCAATCCTCACATACACAGCAGCATATGACAGTGTTGCCCACGCACGCTCATGGACACGCACACTCGCACTCACATCTGCAACCATCACCAGCGGCAATGCAACAGTTGAAGGTAGAATCGCAGGCAACCCAGCTGCCATCCGCTTCTACGCCTCCCACAAATCGTGGAACACCAACGACAGCAATAAGTGGCGGTGTCTCTTCCAACGTAGTGATAGCGTCAAATGCCGTTTCAACGTCCTCGTCGTCTTCATCGTCTGAGGGATACCACCCGCAAGTTGAAGCAATCTCTCCTACACTGCCAACTGATAATGCTGAAGAGAGGGGACGCACAGCAAAGGAAGATCTGCTTATGCAAATTCAGAAGGTCGACACCGATATTCAAAGTGCTGAAAACACAATGGAAACactaaaaaagaaagagaaatcgTTGCTAGATGCTGCTTTGGCATGCAAGCAACAAAAGGAACAGCAGGCAAAGAAACCAGCCGACGATGGGGCTGCGGATGCAGAAAATGCGTGGCGCTCGCAAACCTTGGCGCAGAAAATCTATGAGGCTAACCGAAAGACGGCCGCCGCGCGACATTCCATACTTGGCGGTTGTGGTCCACGTTTCCTTCTGCCGCTATACAATCAGCCGCTTGACGTTGTAGAAATAGCGACGCTGATGAAGAGTCATCAGACGACAATACGCGTACCGCTGCTAGATCATGTACGTAAATTAAAGCAAGAGCGTTGGCTGCACAATACCGGTCTGGTCGATACTTATACGCAAATGTCGACTGAGTGGCAGAAGCGTGTGGAAAAGTCTGAGGCAAGCGCCAAACGTAAGGCGCGCGAGGCCAAGAACCGAGAATTCTTCGAGAAGGTGTTCACGGAGCTGCGAAAGCAACGAGAAGACAAGGAACGTTTTAATCGCGTTGGCTCACGCATTAAATCCGAAGCTGATTTGGAGGAGATAATGGATGGTCTGCAGGAACAGGCAATGGAAGACAAGAAGATGCGCTCGTATGCCGTTATACCACCACTGATGTTTGACGCTCGAAAGCGACGTTCAGTATTTCACAATGAGAATGGCGACATCGAGGATATGGTGGCGATACATAAGGAACGGCAAGCACTGAACGTCTGGACCTCAGGTGAGAAAGAGattttcaaagagaaatttCTACAACATCCGAAGAACTTTGGCGCAATTGCCGCTAGCTTAGATCGGAAATCGGCGCAAGATTGCGTACGCTACTACTACCTCAGCAAAAAATCGGAGAACTACAAACAGCTTTTACGGAAGTCACGCCAACGGACGCGCTCTTCGCGCAACCCACAAAAGACGCAGCAACAACAGACGCATTGCATAATCGATTCGCTGACAACGGGTGTCACAACGAGATTACAGCGCGAACAACAGCAGAAGACTGGTGGACGTTCGGCAGCGGCGGAAAGAGAGCGCGTCGAACGAGCCGCTGAACGGGAACGTGCAGCAGAGAAAGCTGCTACCGatgcagcaaaagcagcagccaGCGCGGCAGCAAAAGCGACTAAAGCCGATAGTAGTTGTGGGAACAGTGAAGAAACAATACCGGCAACAGCCGCATCATCAACACAGGACTCAACTGAGGTGGTGGCGATACCGGCAACAAATGCGAAAAATCCAACTTCAACAGTTGCCACAACTGTTGCATCAACTACAACGGCTGCTCCAACGACAACCGTgaccaccagcagcaacaacagcagtaacatctcaacagcgacagcaacagcatcaacaaaaaCCAATGTTGAAAAATCATCAACTGAAAGCTCTTCGGCAGTTGATGCTGCAAACGGTACAACAGCTAAAGCGAAAGCTGAAGACAACAATACATCAACGACAACAACCACTGCTACTTCTGCAGCAAATAAAGAGGAGAATAAGAAACACGGAGCGTTGGCGAATAGTGAAGATTCTACCTCTACCACATTTGCTTCTACAACAAAAACTATACCAGCTGCGGAAGACAAAGAAGGTGATAAagttgctgcagcagcagcagttggagcaacaacagcagtttCTAGTAGCACTGCTACTTCTGGAACCGTCGCCATTGTCAATGCTGTCTCCACAACAAcatcgacaacagcaacaacaaacacccATCCGCCTTCATCAACGCCGAATGGCATTAAGATTTCCACATATGCTGCTGTAATAGCTGCTGCGGTAGCTGCTGGAAATGAAGAGAATAAATCAACTGCTACTTGTGTTGCTGCAGCGGATAAAATTGCACCAAGCGCTACTGCTGCGGCTACTTCGTCTTCGAGTTCTTCGTCGTCGACGGAAATGGCGATCGATAACAATAATATTGTTGCCACGCCTACTACCTCAACAACAGCTGGCAACTTTCTGGGCCAGAAAATCAAAGCAGCCCAAGTGGAAGGTGTCGGCATTGGTAAAGAATGCTCAGATGTTAGGTGA
Protein Sequence
MHQQQMHLHQQQQQQQQHHHHHHQQQQQQQQQQQQTSRSAASPLSPPRPGPGSAAAANTYAKFADVNAVREAPHRYIQQSSYSIGPGTQYRDSPYTRIPQMPPAQVQEFHRAAAAAVAAAAVSGGNVSGGVVQAPSGLPPQSQVSGTHLETLHFSHQPPPSGQAVSAAQLHSNAGGGGSGNSGGAPSPHNSSGSSIMVARQRILLPPHSQAPQFTNEYLTNASVASANRQQQQQQQHQQQQQQQQQQQQQHQQQQHQQQQQQQQHQQQQQQHHQQQQQLQQQQQQQQQQQQHQQQQQQHQQQHQQQQQHHQQHTQQPQGPPDPGGAQPYKKLRLSEVNASNINHLPPQLANAHQQHQHQQQRQPSPAASLVQANSGRNSSHMPQSSHTQQHMTVLPTHAHGHAHSHSHLQPSPAAMQQLKVESQATQLPSASTPPTNRGTPTTAISGGVSSNVVIASNAVSTSSSSSSSEGYHPQVEAISPTLPTDNAEERGRTAKEDLLMQIQKVDTDIQSAENTMETLKKKEKSLLDAALACKQQKEQQAKKPADDGAADAENAWRSQTLAQKIYEANRKTAAARHSILGGCGPRFLLPLYNQPLDVVEIATLMKSHQTTIRVPLLDHVRKLKQERWLHNTGLVDTYTQMSTEWQKRVEKSEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMFDARKRRSVFHNENGDIEDMVAIHKERQALNVWTSGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKSENYKQLLRKSRQRTRSSRNPQKTQQQQTHCIIDSLTTGVTTRLQREQQQKTGGRSAAAERERVERAAERERAAEKAATDAAKAAASAAAKATKADSSCGNSEETIPATAASSTQDSTEVVAIPATNAKNPTSTVATTVASTTTAAPTTTVTTSSNNSSNISTATATASTKTNVEKSSTESSSAVDAANGTTAKAKAEDNNTSTTTTTATSAANKEENKKHGALANSEDSTSTTFASTTKTIPAAEDKEGDKVAAAAAVGATTAVSSSTATSGTVAIVNAVSTTTSTTATTNTHPPSSTPNGIKISTYAAVIAAAVAAGNEENKSTATCVAAADKIAPSATAAATSSSSSSSSTEMAIDNNNIVATPTTSTTAGNFLGQKIKAAQVEGVGIGKECSDVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132864;
90% Identity
iTF_01132864;
80% Identity
iTF_01132864;