Pscu009676.1
Basic Information
- Insect
- Palloptera scutellata
- Gene Symbol
- lola
- Assembly
- GCA_958295655.1
- Location
- OY282451.1:1842311-1844792[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-11 3.8e-08 32.9 0.0 3 45 443 485 441 485 0.90 2 2 5 7.8e+03 -3.4 1.2 4 20 587 602 587 602 0.84
Sequence Information
- Coding Sequence
- ATGGGTGGTCCACCCCCCCTGCCGGCCATCGAGGGGCAGACGTATTGCTTACGTTGGAATAATCACAAATCGAATTTGGTCGAAATACTTGATGCGCTCATTAAAGTTGAAAGCTATGTTGATTGCACCATTGTAGTTGATGATCAGGTGCAGTTCAAGGCGCATCGCGTCGTTTTGGCTGCCAACTCGCCGTATTTTCAAGCTATTCTACAAGATGTGTCGATGGATCATTGCAGCATTATATTTCCGGGCGTAAAAGCGTTCGAAATGCGTGCACTACTAGAGTACATGTACACGGGGGAGGTGAACGTTACACAGAGTCAAATACCGAAAATCATGCGCATCGCGGAGGAGCTGGAGGTCAAGGGTCTTTTCGACATGGCCGATCTGAAGGAGAAATTCAATCGATTAAGCGAAGATCGCACAGAACACCCAGCTAATATTTATCCTGGTTGCTATGCTCCACTCGTACCTTATTCTACAGCGCCGGCAGCGGCGACTACTTCATCCTCCGCATCGTCGTCGTCagcggcagcagtagcagcagccgcCGCAGTAGCAGCGGCGATAACCGAACACAACGGTGCGAAAGATCCTGGCGGTAATTCACATCAACACAATTCCTCATCCGTGATCTCAACTTCATCAAACATTTCACCAGCAGCTGCGCCTTCGAGTAGTTCGTCACCACCTTATAGTAGCTACAAATCGCCATATTCGAGTCTGTATACAAAGTCTCCGGGAGCCGGTCCTGCAGCAACTGCATCGTCAGCTGCAACAGCTACAGCATCTACCGTCAGCATTGCTCCGACAACATCTCATTCACAATCACAACAGCAATCGAGCAGTGCTAGCGCCGCAGAACGTAATCAGTGGCCGTTGTCACCCTCGGCTGCTGCAGCAGCTATGCTGAGCTCCGTGTATGAGTCCGCGCCTGACATGAATCCGCTCAAACGTAAGAAACTCTCGTCGATCTCTAGCATGTTAATGAACCGCGACACACCTATTCTACGCAATGTATTGGCCCAAGCCAATCCCGCGGACTCATCGCCACCAATGCCACTACTGCTGCCAGGTGCCATAAAATCTGATAAATCATCAGCGGACAAAAATTCCCCACATGCCGCCATGGTGAATAACAGCCACAGTTTCAATGGATCAGACTATAATAATGATAAGAAGTATCCTGATGAACCACATTCACCATTTACTGATCGTTCCTTTGATGACGAAAGCTTCGATGCAAAAGGTAATTTCAGTGGCAGCTTCGTTGGCTCGAATTCGAATCAAAAACCAGAATGGAAACGCTACAAACAATACACACGGAACGATATTATGTCCGCCATACAGTGTGTGCGTGACGGTATGAGTGCATTGCAAGCATCTCGGAAATTTGGTGTACCTTCACGCACGCTTTACGACAAAGTTAAGAAGCTAGGCATTACGACAGGGCGTCCCATGAATCGTACAATGAAACGTAGTCCAAGTAGCGTGGAATCTTCGGCAGCATTTCCCTATGCACACGGTTATGGTCAATCGGAACCATTGCTCTCGTCCATGCATGAAACTGGCAGCAGCAGTCGTGTTGGCGATGAACGCGAACCGAAGGATCATTTACGTTCagaacatcatcatcatcatcatatgcCACCGACTATGACGCATCCAGCTGCTGCCTTACTCGACCATGCATTCCTGCAGCAAGCATTGGAAAATCACGGTGGCGACATTGCCGGACGTGAAGCACTTCATGCTATGGCTTTGGCTGCGGCAGCACATGCCGCGGCCAATAGTATGTCCACCAGTCCAGGACCAAATGGCACAGCAGCACGTTCGCCAAGTCCACCGAATTTTGGTGGTGGCGGAAGTGGCATGAAATATGGACGCCATAGTGAACATGAAATGTTATTGGAACGTGAGAAAGAGCGACGCATCATCGAAAATGAAATAGAACGTGAACGTGAACGTGAATTGATAGAAATGGAACGAGAACATGAAAGGCGTCACCGTGAACAACTCGATGCcgacgacgatgatgaagaagaaaacCAGGTGGAAGACTTATCTGTGGCACGTAAAGATTTCATTTCACCCGAACCAAATCAAATGGCAAGCAGCAGGCGCGTAGAATCACCAACGTATGCACCATCCACGCCAACTCCACCACTGCCATCGTCACTGTCCAGTACAACAACAACGCTGCCAACGCTGCCAACGCTGCCATCATCTATCGGCAGCAGCGAGAATGGCAGTGGCGTAATTGTGCCACCAATTAACAGTAACAATAGCAGTTCGTTGAAATTACATGTTGCCAGCACTAGTAGCGGAGACGAGCTTATAACTGAATCGGCAGTGAAACGCGAAATTATCAGTAGCGATGATGGCCGTGCCGACTGA
- Protein Sequence
- MGGPPPLPAIEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQAILQDVSMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNRLSEDRTEHPANIYPGCYAPLVPYSTAPAAATTSSSASSSSAAAVAAAAAVAAAITEHNGAKDPGGNSHQHNSSSVISTSSNISPAAAPSSSSSPPYSSYKSPYSSLYTKSPGAGPAATASSAATATASTVSIAPTTSHSQSQQQSSSASAAERNQWPLSPSAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQANPADSSPPMPLLLPGAIKSDKSSADKNSPHAAMVNNSHSFNGSDYNNDKKYPDEPHSPFTDRSFDDESFDAKGNFSGSFVGSNSNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSVESSAAFPYAHGYGQSEPLLSSMHETGSSSRVGDEREPKDHLRSEHHHHHHMPPTMTHPAAALLDHAFLQQALENHGGDIAGREALHAMALAAAAHAAANSMSTSPGPNGTAARSPSPPNFGGGGSGMKYGRHSEHEMLLEREKERRIIENEIERERERELIEMEREHERRHREQLDADDDDEEENQVEDLSVARKDFISPEPNQMASSRRVESPTYAPSTPTPPLPSSLSSTTTTLPTLPTLPSSIGSSENGSGVIVPPINSNNSSSLKLHVASTSSGDELITESAVKREIISSDDGRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470624;
- 90% Identity
- iTF_01133011;
- 80% Identity
- iTF_01133011;