Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_958295655.1
Location
OY282450.1:2063354-2082135[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-14 2.9e-11 42.9 0.0 1 45 472 517 472 517 0.96
2 2 1.5e-18 2.3e-15 55.9 0.0 1 43 974 1017 974 1019 0.94

Sequence Information

Coding Sequence
ATGCTTTTCATACTCATATGCTTTGAAATCGATGGGCTCGTAGGCTTAGAACGGGTCGCTGAGGAGTTGATGGGACGCAGGAAATGGAAGCATTATCAAGAGGCATTAACGCGCACCCATTTAAATACCGACCAATTATTGACAGCATCAATAGTGCAACAGCAAGTCTATATCGAGCAGGAGAAACGGAACGAGCACGATTCTATCAAACTGGAGAACGACAATTCCAAAACAGCAGCAAGTTCAATAACGGGACTGCAACAAGAAAACCAACAACGCTACGACGAAGAAAACCACCGCCAACCGGAAGAAAGAAGATTCGAGGAGGAACAGCGccagcaggagcagcaacaacaagaacaacagaagcagcaactCAAGCAAGAAAACGACGACGACGCTATAACGGTTCATTGGAAAACGGAAGGAAAGGAAACATTTGAAGAAGTTGCTTCAAAAGCAAATAGTACATCTACATCACAAAACCACAATCAATCACaggaaaatagtaatagaattacttgcaacaacaacagtgacaGAACACAATCGGAAAGAAAAACGGAAATTGCCACAACAGTAACGAAACCATCACTTAAAGTTGAATCGAGCATCACAAGCGATAcatcatcaaaaacaaaaatattagagTTCTCAACCACCacagcaaacaacaataacaacgcaCTGTGGTCAATAACACCACAAGTCGAATCTGTGTCCGCATCCGAATCCCCACCACCACCAGAACCCATCGATTGGAGACCGAATGAAAAGTGTTACTTTTGTGTGGACGGCAAATTACTCACAGTGAACGCCAAAGGTGAACTGGTGGCCGAGTCGGGCCCGGCTGTGTCCGAGGCGGAACACGGCCACAGACTCGAAACCGATAGCGATTCGAATGAGTCATCGAATATAGCTACAGGTggaacaccaacagcagcaggcTCTTCATTAACCAATAGTAATAATtgtattaatttgaataaactTCTAACATCACGTCTCAAAGAATTGCCAGCGAATATGACATCAATGGATTCGATGACAGCACGTTTAGCGGTCCATTTGGGTTATCAAAATCTCAATTGGTTGCAATTAgtccaacagcaacagcaacaacagcagcaacagcagcagcaacagcagcagcaacagcagcaacagcagaaccaacatcaacagcagcaacaacaaggaaTTTCGGCCACACCAACTACCTCAGATACATCAGCCGCCGCTATCAGTCCTTCACTCAAGGATTCACCAAGCCCCAATGCAGATGCAACCGGTGAACAACCATTAGATCTTAGTTCCAAACCTTCACCGAATTCATCCATTAGCGGGGACTTGAAATCAGTGAGGGCGAAACCATCACGAGCTACACCAGTGCCCTCAGGACGTCGCACCTACACAGATGACGATTTGAATAATGCTCTGCAAGATATAATAAGTGGTAAGTTGGGGACGCGTCGAGCATCAGATCAGTACAGTGTGCCACGCTCTACGCTTCGCAATAAGGTCAACAAGCTTACAATGCGTGCGAAGCGAGTTAATGCCCAAACACCAGCCGAACTCCTACAGCTGCAACGTGAACTCGAAATGGACAAGGATCTGTCCGGCGACGAGGCGGGTGGTTGTGGTGACGACAGCAACGCATCGACGCCACAGCCCGACGTGCAGCCGGCGCTTGATGAATTTACGAATCGGGTAATTGCTTCGACAACATTGCGCAAGCTATGCAATAACAATGACGGTGATGTTGGAAGTGATGGAGAGAGCGAAATCGCAAAGCCGCATACAATGCAAAGCGATGCAAATAAACGTCAAAGTAGCACTCCGTCGAGCAGTGCCCATTTGCAACCTCAAGCATCACCACAATTCGGACCAATGCTAATTGATCCTAATGTGCTGTTGCAAAGAATGCTATTGGCTGCAGGTGGGCTTGGAGATATTGGAGATATTGTGATGAAACTTACAAATGCTATAGCCGTTAGCGCAGTCGCAGCTGGTGGCGACAGTACACTcaacaatggcaaaccaaatatGAATGACCAGCGATTGCTGTTgcaacaactgcagcagcaccagcaggcGCCCCAATATCCACATCGTCTAGCAAAGTCTGAAACTCCCGAGACCACATCTTCGCTGGATCCAAATGAAGCATGTGAAGATCCGTCGACGATACTTAAAATTCCGTCCTATAAGCCCGTGGCAGGAACTTCCTCCTCGATAGGCGCTGATGCAGTCTCTGCGCGTGCGTCCTGTTCGCCATCGCTActatgtaacaacaacaataacaacatcgtCAATACGAATCCGAACCGCAATGGCGACAGTCCGCATTCGACGTCCTCGCCGCACATTGCCACCTCAATGCTGGCGGCTGCGGTCGCAGCGGCAGGAGGCAATCCCTCTTCGTCTGCAAATCGTCAAAGTAATAATATTTCCGTTATCTCACCGCCACTCATGCATCACCACAGCCTCAGTGCGACAGATTCGTCGTCACCGTCATTCTCATTGCGCGATGTCATCGCTAACAGCATACATCGCACAATGAATGAACAAGCGAACCAAGATGCCCATGCAGCCGCCGCTGCCTCCATGTTAGGATTGGGCACTGATGTAGATCGAAGCTCCAGCAGCGGGGACTACAAGAAGCCCAGCATTTCGGTGGTGAAGAATATTGGTGGTACTGATACTTCTCGGTTTGGTACTGCGCCAAATCTGCTGGCATCCGTTAGCGGTGGTGGCGGCTCACACAACTCGCATCACCACCATCAGCCACATCCACAGCTACAACACGCCCACCATTCGCACCATCATCCCTCTGCGCATCACCTCAGCCGTCAAGAAGCAGCCGCACTTGCTGCCGGCAAAGGCACACGTCCAAAGCGTGGAAAATATCGCAACTACGATCGTGACAGCCTTGTGGAAGCGGTGAGAGCCGTACAACGTGGTGAAATGTCTGTACATCGTGCTGGTAGCTACTATGGCGTGCCACATTCCACCCTCGAATACAAGGTAAAGGAACGGCATCTGATGCGCCCGCGGAAGCGTGAACCAAAACCACAGCCAGGACTAGACGGTAGCAGTAGTAGCACGACGACTTCGAAATCAAACTCAAACATTCCAGGTCTCAATAGCatcgataaaacaaaaatgggtGCCGCTGGTGCAAGTGCAAAGCTGAGTAGCGCGcacaagaataacaacaacaacaatagcgtcGCAACATTCCCCAGCACTACGCCAAACGGCATGAAGCTGCCTATATTCGATCCGACCCAGCTGCAGTACCCAACGCATCTCTTTTGGCAACACTCGCCCGCGGCAGCGGCTGCAGCATTCGGTCAGATGCCAATTGATTTCAATCGCAATGCAGCGACTCAGGGCGGCATtggcagcaacatcaacacagATTTACTAAAGTCGCGCATACAACGCTACCAGGAGGAAGTAATACGATCTGCTGGCGGAAGCGGCAACTCTGGTACCGCAAATACCAACAGCCCCAGTCCCATTTCTAGCCCATTGTCAGGGCAAAATCATCACGCAATCAACCTGAATGCCAATGGTTCCTCTTTCCTCGATGGCATCATACGCCAAACACTTGATCGCAAAAGCGGTGAAGTGTTACCATCGGCCAGTGGTGGTGGCGCTCTACTCGATCAGTTACTAGTGAAGAAGACACCATTGCCATTCACCAATAATCGCAACAATGAGTATGCGACCTCATCTGCAGCGACGACGACGGTGGCAGCAGCAGCCTCGAAACGCTCAGGTAGTCCACTCTCCCTTACGGAAATCAAGCGAGAACGTACAAGTCCAATGCGCAGCAGCGAAGATGACGACGATGAATCACAAAGTGGTGCTGAAGATGCAACACTcgagcacaacaacaacaaaagtaaccTCAGCGGCAACGGTGGAATCGGTATCAATGATCATCAACATCACCAccagcaccaacaccaacaccaacaccaacaccagcaccagcaccaacaacaacgcaGCCGCATGACATCGCGTGATTCGGAGACCGATGGCAGCAGCATGAAAAGTGAACGCTTGCATGCGGCAACACATCAATACAATCATAATAACACTAACAAGCTGGTGGATCTAAATGGCAGCAGCAGCGCAAGAACGTCAAAAACAGAAATGCCTGTGGAATCAATTGGAAACACATCAATACTGCAAGAGAAATTGGCGCAAATCAAAGCAGAGCAAGAGAACGAAGAAAACTTATag
Protein Sequence
MLFILICFEIDGLVGLERVAEELMGRRKWKHYQEALTRTHLNTDQLLTASIVQQQVYIEQEKRNEHDSIKLENDNSKTAASSITGLQQENQQRYDEENHRQPEERRFEEEQRQQEQQQQEQQKQQLKQENDDDAITVHWKTEGKETFEEVASKANSTSTSQNHNQSQENSNRITCNNNSDRTQSERKTEIATTVTKPSLKVESSITSDTSSKTKILEFSTTTANNNNNALWSITPQVESVSASESPPPPEPIDWRPNEKCYFCVDGKLLTVNAKGELVAESGPAVSEAEHGHRLETDSDSNESSNIATGGTPTAAGSSLTNSNNCINLNKLLTSRLKELPANMTSMDSMTARLAVHLGYQNLNWLQLVQQQQQQQQQQQQQQQQQQQQQQNQHQQQQQQGISATPTTSDTSAAAISPSLKDSPSPNADATGEQPLDLSSKPSPNSSISGDLKSVRAKPSRATPVPSGRRTYTDDDLNNALQDIISGKLGTRRASDQYSVPRSTLRNKVNKLTMRAKRVNAQTPAELLQLQRELEMDKDLSGDEAGGCGDDSNASTPQPDVQPALDEFTNRVIASTTLRKLCNNNDGDVGSDGESEIAKPHTMQSDANKRQSSTPSSSAHLQPQASPQFGPMLIDPNVLLQRMLLAAGGLGDIGDIVMKLTNAIAVSAVAAGGDSTLNNGKPNMNDQRLLLQQLQQHQQAPQYPHRLAKSETPETTSSLDPNEACEDPSTILKIPSYKPVAGTSSSIGADAVSARASCSPSLLCNNNNNNIVNTNPNRNGDSPHSTSSPHIATSMLAAAVAAAGGNPSSSANRQSNNISVISPPLMHHHSLSATDSSSPSFSLRDVIANSIHRTMNEQANQDAHAAAAASMLGLGTDVDRSSSSGDYKKPSISVVKNIGGTDTSRFGTAPNLLASVSGGGGSHNSHHHHQPHPQLQHAHHSHHHPSAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSSTTTSKSNSNIPGLNSIDKTKMGAAGASAKLSSAHKNNNNNNSVATFPSTTPNGMKLPIFDPTQLQYPTHLFWQHSPAAAAAAFGQMPIDFNRNAATQGGIGSNINTDLLKSRIQRYQEEVIRSAGGSGNSGTANTNSPSPISSPLSGQNHHAINLNANGSSFLDGIIRQTLDRKSGEVLPSASGGGALLDQLLVKKTPLPFTNNRNNEYATSSAATTTVAAAASKRSGSPLSLTEIKRERTSPMRSSEDDDDESQSGAEDATLEHNNNKSNLSGNGGIGINDHQHHHQHQHQHQHQHQHQHQQQRSRMTSRDSETDGSSMKSERLHAATHQYNHNNTNKLVDLNGSSSARTSKTEMPVESIGNTSILQEKLAQIKAEQENEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-