Pven007130.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_012654025.1
- Location
- CM022880.1:24083036-24095106[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1 1e+04 -3.2 1.1 15 19 175 179 174 179 0.81 2 13 2 2.1e+04 -5.8 4.2 4 10 210 216 210 216 0.56 3 13 2.1e-07 0.0021 18.2 15.1 1 19 224 241 224 241 0.99 4 13 0.82 8.4e+03 -2.9 2.4 5 10 265 270 265 270 0.95 5 13 1.8e-08 0.00019 21.6 16.4 1 19 276 294 276 294 0.99 6 13 3.2e-06 0.033 14.4 13.1 3 18 359 374 357 375 0.92 7 13 5.9e-11 6.1e-07 29.5 12.0 1 18 384 401 384 402 0.98 8 13 0.0022 23 5.3 5.5 10 19 451 460 449 460 0.93 9 13 0.0016 16 5.8 6.6 1 12 469 479 469 479 0.96 10 13 0.97 1e+04 -3.1 1.1 14 19 508 513 508 513 0.86 11 13 1.9e-05 0.19 12.0 5.7 1 11 549 559 549 560 0.96 12 13 2.2e-05 0.22 11.8 19.2 3 18 590 605 589 606 0.93 13 13 0.00021 2.2 8.6 13.0 1 16 651 665 651 671 0.89
Sequence Information
- Coding Sequence
- ATggtaaagaaaaggaaaaagaaaaatcttggcgAAGGAGTGGTGGTAGAAGGGACAGACATTCCAAATGGAACTGCTTGCAGCGCATCTACTTCCCATCAGAATAACGTTAATATACATCCAAAATTTTTAGAAGCCCAAGCTAAGTTTTCAAACGTAATCAAACAGAACCTAGAGAACAATGAATATCTGTCGTCCTCAGAGGAAGAGGACATAGGATCAGATGTTTTGGATGGGATTTTGGgCAAACTTTTGGCGTCCTATCAAAAGACGGGCGGTAAATTGGAAAGTCTTGGAAGAACCCATAAATATCTGAACGAAGCTTTTAGTAGTGGGGCAGCTGTATGTCTGATTTGTATTGCGAGTATTAAGAGATCGGATTCAATCTGGAGTTGCAAAGGCTGCTACTGTTTGTTTCATCTGACTTGCATACAAAAGTGGGGACGGGACAATATTGCTCAGAAACGGGTCCACCATGATGAGCTCCTAATTGATGTTGTACCCCCTCCACTTACTTTTGCTTGTCCAAAATGTCGCACAGAATACTCAGAGAAAGAAGTTCCCCAACAGTATCTTTGTTTTTGTGGTGCAAAGAAAGATCCCCCATTTGAACCATGGCTTGTACCTCACTCATGTGGAGAACATTGTAACAAACAATTGGTCCCAAATTGTGGACATATTTGTTTATTACTTTGTCATCCAGGACCTTGTCCGCCATGTCCCAAAATGGTCAAAACAGATTGTCAATGTGGTCAAAATAGTCAGTTACAGAGATGTGCCAACCAGGAATGGACTTGTAAAGAAACATGTAACAAATCTCTCCTTTGTGGTGTTCACAAATGTAAACTTCAATGTCATACAGGTCCTTGCCAGCCTTGTCCTAAGGAATCTTCACAACCATGTCTGTGTGAATCAGAACTAAAAGTCCGACCCTGTTCTCAACCAAAATGGCAATGTGATAAGTGTCTGGAAAGTATAGTCAAACGATGTCGCTGTGGGGCTAGATTAAAAGAAGTTCCCTGCGCTAAGGAGTTCATTTGTGAAACAAAATGCAAACGAATTCGAAACTGTTTCCTCCATTCTTGCAATCGGAAATGTTGTAAAGGAAATTGTCCACCTTGTGAAAAACCTTGTGGAAAAACACTTTCTTGTGGCAATCACAAATGTACTCAATTGTGTCATGTTGGACCATGCTATCCTTGTGCTCTCACAACATCTATCTCATGTCGTTGTGGAAACAAATCTTTAACAGTGTCATGTGGAGCTAAAAAGAAAACCAAACCTcctaaatgtaaaaatagatGCAGactCAAACCAGACTGTCACCATTCAGAAAGCTCACCTCACAACTGTCATTTTGGAGACTGTCCTCAGTGCACACAAATATGTGACAAACCTTTTGAATGTGGTCACAAGTGCCCTATGAAATGTCACTCAAGTGTTCTTGTAGATATCTCAGCTGATTATAAACCAGCTGGTCCATGGGAGAAAATTGAACCCCGATtTGTGAAGAAAAGTTTCCCGTGTGATGTGTGTAAAATTCTAGTGGAAGTTGTTTGTAATGGAGGCCATGAGAAGCGCACCCTACCGTGCCATCTAGTTGCACCCTATGCTTGCAAATCCAAATGTGACTATGTTTTACCCTGCGGGAATCACAAATGTCGTCTTCCATGTCATGTGAAACAGATAATGCCAGAGAATCCAAATATAAGTTTAAACTGTAAAGGTTGCGACACAAAATGTCCTCGTCCTCGGCCCACTGGTTGCCATCATCCATGTCTGCGTCCTTGTCATTCTGGTCCATGTCCGCCATGTGACATGAAAGTGAAACTCAAATGTCACTGTTCTCTCAATCATGTCTATGTTTCTTGCTTTAAATGGACATCAGCATCACCCCAAGATAAAGTCGAACTGCTTCGATGTTTAATTCGATGTCCGAAAACGTATGAATGCGGTCACCTCTGTGTATCTCAATGTCACCCGGGCCCGTGTCCCATACCAGACAAATGTGAAGAAAAAGTCAAAGCTCGCTGTTCCTGCAAACGTATCATCAAAGATTTACCTTGCTCTGACGTAACAATGGGCATTGCCAAAGTAGAATGTAATGTCCAGTGTGAGAAAAAGAAGGATCAAGTACGCAAGatgaaggaagaagaagagaatGCAAAGAAAATTGAAGACGAAATCAAAGCCCAACAAGAATTAGAAATTTAtcaacgaaaatttcaacaaaatcgaaataaaaaacacaaagaacCGAAACAATACGAAGTTAAACGAAAATCTTTTTggcaaaaatattcaaatcaaatCATAGTAAGTTCTTGTTTTATTGCATTCATATTACTTATGAGTTTTATTGTCATAAGTAATTTAGAGGATGTACCCAAGTAG
- Protein Sequence
- MVKKRKKKNLGEGVVVEGTDIPNGTACSASTSHQNNVNIHPKFLEAQAKFSNVIKQNLENNEYLSSSEEEDIGSDVLDGILGKLLASYQKTGGKLESLGRTHKYLNEAFSSGAAVCLICIASIKRSDSIWSCKGCYCLFHLTCIQKWGRDNIAQKRVHHDELLIDVVPPPLTFACPKCRTEYSEKEVPQQYLCFCGAKKDPPFEPWLVPHSCGEHCNKQLVPNCGHICLLLCHPGPCPPCPKMVKTDCQCGQNSQLQRCANQEWTCKETCNKSLLCGVHKCKLQCHTGPCQPCPKESSQPCLCESELKVRPCSQPKWQCDKCLESIVKRCRCGARLKEVPCAKEFICETKCKRIRNCFLHSCNRKCCKGNCPPCEKPCGKTLSCGNHKCTQLCHVGPCYPCALTTSISCRCGNKSLTVSCGAKKKTKPPKCKNRCRLKPDCHHSESSPHNCHFGDCPQCTQICDKPFECGHKCPMKCHSSVLVDISADYKPAGPWEKIEPRFVKKSFPCDVCKILVEVVCNGGHEKRTLPCHLVAPYACKSKCDYVLPCGNHKCRLPCHVKQIMPENPNISLNCKGCDTKCPRPRPTGCHHPCLRPCHSGPCPPCDMKVKLKCHCSLNHVYVSCFKWTSASPQDKVELLRCLIRCPKTYECGHLCVSQCHPGPCPIPDKCEEKVKARCSCKRIIKDLPCSDVTMGIAKVECNVQCEKKKDQVRKMKEEEENAKKIEDEIKAQQELEIYQRKFQQNRNKKHKEPKQYEVKRKSFWQKYSNQIIVSSCFIAFILLMSFIVISNLEDVPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -