Pven004399.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- -
- Assembly
- GCA_012654025.1
- Location
- JAAEEI010000565.1:6252-7728[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0042 14 5.5 0.1 7 19 139 151 137 152 0.87 2 8 0.0042 14 5.5 0.1 7 19 167 179 165 180 0.87 3 8 0.0042 14 5.5 0.1 7 19 195 207 193 208 0.87 4 8 0.0042 14 5.5 0.1 7 19 223 235 221 236 0.87 5 8 0.0042 14 5.5 0.1 7 19 251 263 249 264 0.87 6 8 0.0042 14 5.5 0.1 7 19 279 291 277 292 0.87 7 8 2.3 8e+03 -3.3 0.0 8 14 337 343 335 347 0.75 8 8 2 7e+03 -3.1 0.0 8 15 365 372 363 376 0.75
Sequence Information
- Coding Sequence
- ATGGAAACCAAGTGCGGAGAGGCCAGACTTAACACAGGAAGAGTGGAAGATaagatttttgaaaaaacaactcATAATAACTCACCACTGTGGGACACCACAGCAGATCCTTCGCCACCAGAAACCATCTTGGAAATCCAAGCTCATAACAGTGATAATAACTCACCACTGTCGCGTCTTTCACCAGCAGGTCCTTCGTCACCAGAAACCATCTTAGATGTCCAAGCTCATAACAGTAAAAATAACTCGCAACTGTCGTCGCGACCTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTCGACGCGACCTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGCGTCTTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTCGACGCGACCTTCACCAGCAGGTCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGAGTCTTTCACCAGCAGATCCTTCGCCACCAGAAACCATCTTGGAAGTCCAAGCTCATAACAGTAATAATAACTCACCACTGTGGAGTCTTTCACCAGCAGATCCTTCGCCACTAGAAACCATCTTGGAAGACCAAGCTCATAACAGTAATAATAACTCACCACTATCGCCGCGGCCTTCAGCAGCATATCCTTCGCCACCAGAAACCATTTTGGATTTCCTTTTCTTTCGCACCTCAGACTTGTCAGCAATAAGATTGAGCTCCAACAGTTTctga
- Protein Sequence
- METKCGEARLNTGRVEDKIFEKTTHNNSPLWDTTADPSPPETILEIQAHNSDNNSPLSRLSPAGPSSPETILDVQAHNSKNNSQLSSRPSPAGPSPPETILEVQAHNSNNNSPLSTRPSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLWRLSPAGPSPPETILEVQAHNSNNNSPLSTRPSPAGPSPPETILEVQAHNSNNNSPLWSLSPADPSPPETILEVQAHNSNNNSPLWSLSPADPSPLETILEDQAHNSNNNSPLSPRPSAAYPSPPETILDFLFFRTSDLSAIRLSSNSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -