Pven016726.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- gata4
- Assembly
- GCA_012654025.1
- Location
- CM022884.1:12336910-12358225[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.55 1.9e+03 -1.2 0.2 3 8 148 153 147 159 0.84 2 3 3.2e-18 1.1e-14 53.9 3.2 1 34 191 223 191 225 0.97 3 3 9.2e-17 3.2e-13 49.2 6.6 1 35 245 278 245 279 0.98
Sequence Information
- Coding Sequence
- ATGTACAGTCATACGACTGGCGGACTTTATTCCACGCCACCAAATCTAACCCTACCACAATATTTTGCAACTGCTAGTCCATCATCAACTACAGGAGGTCCTAATGCTTCAGATCTCAATGTACATCAATCCACCCAATTGTGGCAATCCCAAGAAGAAGAAATCAAATACTCCTCTCCACCTCCATCAAGTCTGAAAAATTCTGCCTCCAGTATGTTGTCATCACCTTCAGCATCTGGAAGTGTTTTGCCTCCATTTAAACATTACCGTATTACACCTTACGCGAGACCTTCATCTTATTCGATGTCTCCTACAAGTACCACCACGACACCAAACTATATCTCATCAGCCGAGTGTTGGACCCCTTCACCTTATGCAACCAACAATCCTTCCGAACTTATTTACAGTCCAGTTATACCTCCAATCTCAACAAGTACACCAAATTGTAACACCACCAGTAGAAGTCAAAGATCTTCAGCAAACTCCAATAGTAACAATTTGAGCACATATTCCGCTTCAGCAAGTTTATCAGCAaTGGAAGATCTAGATTATTTCACCGAAGGACGGGAATGTGTTAATTGTGGCGCTATTTCGACGCCACTTTGGCGACGAGATGGTACAGGACATTATCTTTGCAATGCATGTGGACTTTATCATAAAATGAATGGAATGAATCGACCTTTGGTCAAACAACCACGACGATTGACCGCTAATCGTCGTATGGGACTAATATGTTCTAATTGTAGCACGGGGAATACATCGCTATGGCGAAGAAATACATGCGGCGAACCAGTTTGCAATGCTTGCGGACTTTATTATAAGTTACATGGAGTTGTAAGACCTTTAGCAATGAAGAAAGAAAGTATACAAacgAGAAAGCGGAAACCCAAAGGTGGCAAAAATGAAATTACTAAAAATATGTTGAAACAAACTCTTGATCATCATCACTCCTCTGCTTCTGCCGATCTCATCAATTTCACTCGTACCTCCTCTGTTCCAACTAGTTATTCATCGTCAACACCACAAGATTCAGCAAGTGTTCTGTCAGCATATAATAATCTTTATTCAAATTCAGCATCTCACTTACAAACTTATTACGATCAAATTATCAGCGTAAAATCTGAAAGAATGTCACCTCCAGGTGGCGCTGGTATTCATTCTGAAGGCTCGCCTCACCATATTGTGCATTCTAATTCGGGAAGTGCTGCAAATTCAGATAATGAATCTCAAAGGCCAAGTGTTGTCAGCATTATTTCTTAA
- Protein Sequence
- MYSHTTGGLYSTPPNLTLPQYFATASPSSTTGGPNASDLNVHQSTQLWQSQEEEIKYSSPPPSSLKNSASSMLSSPSASGSVLPPFKHYRITPYARPSSYSMSPTSTTTTPNYISSAECWTPSPYATNNPSELIYSPVIPPISTSTPNCNTTSRSQRSSANSNSNNLSTYSASASLSAMEDLDYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLTANRRMGLICSNCSTGNTSLWRRNTCGEPVCNACGLYYKLHGVVRPLAMKKESIQTRKRKPKGGKNEITKNMLKQTLDHHHSSASADLINFTRTSSVPTSYSSSTPQDSASVLSAYNNLYSNSASHLQTYYDQIISVKSERMSPPGGAGIHSEGSPHHIVHSNSGSAANSDNESQRPSVVSIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -