Pven016729.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- pnr
- Assembly
- GCA_012654025.1
- Location
- CM022884.1:12467891-12473619[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-18 5.2e-15 54.9 3.2 1 34 11 43 11 45 0.97 2 2 5.5e-19 1.9e-15 56.3 5.7 1 35 65 98 65 99 0.98
Sequence Information
- Coding Sequence
- ATGGAATTTCAATTTGGTGAAGGACGGGAATGTGTTAATTGTGGCGCTATTTCGACGCCACTTTGGCGACGAGATGGTACAGGACATTACCTTTGCAATGCATGTGGACTTTATCATAAAATGAATGGAATGAATCGACCTTTAGTCAAACCATCAAAACGACTTactgCCACCCGGAGATTGGGTCTTTGTTGTACAAATTGTGGTACCCGCATGACAACACTTTGGAGGAGAAATAATGATGGAGAGCCTGTGTGTAATGCATGTGGCCTATATTATAAACTACATGGTGTAAACCGGCCTTTAGCTATGAGGAAAGATGGTATCCAAACTCGGAAAAGAAAACCTAAAAAACAGTCATCGGGTGGGACAGGAGGTGCAATTACTAATGTTGGCAGTTTGGATCACAACTCTGTCAGATCAGATCTCAAATCATCCCTTCTGGATAATAAACAGTCATCAATATCTCAGCACAATACTTCCTCATACATATCTCTTCTTCACCAAACCACCGCCGTCGGTACTAATTCAACTTCAGCGTCATCAATCAAATCAGAACTACCAAATGTTTCTGTTTCCCCATATTTAGAACATTACAGTGCTCCTTCTTCAGCACAATTAGGATTTTCATTTACTTCTCCATCACATTTACATGCGCACGCAACTCATACGCATGTGTCTCATGCGCATCATCAATATCATACGATGTTGAATAGTTCAGGGAAATTGATTACGTCATAA
- Protein Sequence
- MEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPSKRLTATRRLGLCCTNCGTRMTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKQSSGGTGGAITNVGSLDHNSVRSDLKSSLLDNKQSSISQHNTSSYISLLHQTTAVGTNSTSASSIKSELPNVSVSPYLEHYSAPSSAQLGFSFTSPSHLHAHATHTHVSHAHHQYHTMLNSSGKLITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -