Pven011263.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- RCOR3_1
- Assembly
- GCA_012654025.1
- Location
- CM022874.1:5876888-5878144[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-07 0.00033 20.9 0.0 3 46 112 155 110 155 0.96 2 2 1.6e-14 2.2e-11 43.9 0.0 3 46 351 394 349 394 0.97
Sequence Information
- Coding Sequence
- ATGTCGATCATGGACTCTAACAACAAGAAATCACGACAAAATCCTCAAGACGACGATTTTGCAAATAATCGTATCCGAGTGGGTAAAGATTATCAAGTTCCTGTTTTAGCTTTTACCGGACCTCCGCCGAAGCAAGAATCTCAACCTGATAAAGCTCTCTTGGTGTGGTCACCCTCACATAGAATACCAGATAAGGACTTATCCAAATATTTGCGAGCTGCTCGCGATAAATTTGGGTACAATGAAGAACAAGCTCTGGGTATGCTTTTTTGGCATAGGCATAACTTGAAAGAAGCCATCAAAGATATAGCAAATTTCACTCCTCGACCGGATGATTGGTCTGTGgatgataaaattttgtttgaacaGGCATTTCAATTTCACGGTAAAAATTTCTATGGCATTCGTTCAATGCTACCAGAGAAGAAAATCTCCCATCTAGTGAAGTATTATTACACGTGGAAAAAGATCAAACATCACGTGAGTCTGATAGATAAGTACGAGAAGAAGAGAGCAAGTGGCAATAGTTCAGAAAATGGCAAAATAGATATTGACGAGGACATGTCAGATAGTGATAACTTGGAAGACAAGAAAAAGTGGAAGCCTGGATGTCAACAAAAAGCCCCCGTCCCAGTTACCCGTCGGAGTGAATCTCAAGGTGAGGGATTTTGTTCAAATTGTAATATTCATTGTAGTAACTGCGTGCCTTCTCCCAAAGGCAAAATGTGTGGTAGTTGTTTCATGCATTTTCAACGAACTGGATCTCTTCGGCCCACCATGGCCAAAGATGTTAATACACTTTCTGTCCTCAAATTGCGGAAAGAACCTCCTAAAGGCATGTATGTGAACCATGACGCCTTATGTAAGATATCTGTCGACGCTCAAGCAAACTTAATTCTTTCCAATCTCTCCAATGAAATAGTGTCCTGCAAACGCGTCTGCCaatttaacaaacaaacaattaaTTCATTGAGAGAGAAAATATCCAGTCACGAACCCATTGCAAAGTACTATCCTACACCTTCGGCTAAAACTCCCGTAATTGATTCATCCTGGACCAGTGAAGAGATGTCATTGGCTGTTCGGGGAATTCATAAATATGGAAAAGATTTTAAGGCAATTGCTGAAGTGATTGGCACCAAATCTGAGTCTCACATTCGACATTTCTATAACAAATACAAGAATTGTTACAATCTTGACACTTTACTTGCAGAGAACGATCCCGGCAACTGTATCAAGGATGAAGGCTCTAAATGA
- Protein Sequence
- MSIMDSNNKKSRQNPQDDDFANNRIRVGKDYQVPVLAFTGPPPKQESQPDKALLVWSPSHRIPDKDLSKYLRAARDKFGYNEEQALGMLFWHRHNLKEAIKDIANFTPRPDDWSVDDKILFEQAFQFHGKNFYGIRSMLPEKKISHLVKYYYTWKKIKHHVSLIDKYEKKRASGNSSENGKIDIDEDMSDSDNLEDKKKWKPGCQQKAPVPVTRRSESQGEGFCSNCNIHCSNCVPSPKGKMCGSCFMHFQRTGSLRPTMAKDVNTLSVLKLRKEPPKGMYVNHDALCKISVDAQANLILSNLSNEIVSCKRVCQFNKQTINSLREKISSHEPIAKYYPTPSAKTPVIDSSWTSEEMSLAVRGIHKYGKDFKAIAEVIGTKSESHIRHFYNKYKNCYNLDTLLAENDPGNCIKDEGSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -