Pven004229.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- ttk
- Assembly
- GCA_012654025.1
- Location
- CM022879.1:33231100-33240516[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-15 5.6e-12 45.4 0.0 2 45 257 300 256 300 0.93
Sequence Information
- Coding Sequence
- ATGGCCACAGCAGCATCTACACAATATTGTTTAAAATGGAACAATCACAGATCAAATTTATTAACAGTATTTGATCAATTATTAAAGAATGAAGCTTTTACTGATGTAACGTTAGCTTGTGAAGGTGGCGCTCCAATGAAATGTCACAAGATGGTTCTGGCTGCGTGTTCCTCCTATTTCCAATTACTGTTTACAGAACTACCCTATAAACATACGGTAGTTGTACTCAAAGATGTCACTTATATTGAAATGAAGGCACTGTTAGAATACATGTACAAAGGAATGCCCGGATTTCAAATTCCTACACCACCACCTCCCCCTGGAATCATATTGAACAATTGTTACGAAGCCGCCATGTCAGGAAGTCCGAATATGTCACCTCTGCATAGGAAGAAGAAATTATCCAACATGCTAATGAACAAAGATACACCTATTCTAAGAACTGTTCTAGGACAAGGGCAAGGACAACCGGACAGCTCACAACCTCCAGATCATTTAGAACAAAGTCCAAGATCAAATGGATCCATAGGACCTGAACCACCATTTTATAAGAAGTCTGACACATCACCTGAAGATGCACCATCGCCCTACACTGACGTATCTATGATGGAAGACGAAATCAATGAAAGGaataaattaaTGCTTTCTTCATCTCAATCACCTCAATCGTTTTACGACGGAAAAGGCGAAAGTTCTGCCGTCTCGTCAGCAATAGCGGTTTATGTTCCTCCTCAAAAACCCGAATGGAAACGATATAAACAATACACTCGCAATGATATTCTAAGTGCTATAGAAGCTGTTCGGAATGGTATGAGTGCACTACAAGCAGCCAGAAAATTTGGTGTGCCTTCTAGAACACTTTAtgacaaagtaaaaaaattgggCATTACAACGTCAAGACCTTTTAAGAGAAGtagtaataacaataataatagtaatagttTAAATTATAGTTATATGTATGATAGAGACCGAGGCGAGGAGAGCAATGGCATGAGCTACAGCATCAACTACGGCATGAACTACGGGCTACCGGAGAATAACTTTATGCAACAAGCTTTAGAGTGGAGGGAGAGAGAACGAGATCTGCTCGAGAGagaaaacaacaataattcaAATCACAATTCATTGAGTCCGCTGCATCGATCGGATAGTCCGAGTCCCAATCACATTAAATATCACCATAGAGACAGAACGCCTTCTCCAACGCCGCCTCCTGAACACGACATGGAAGAAGATGATCAAGTTGAAGATCTTTCAATGGGAAGGAAAACATCTCGACCGTCATCACCTTCTCCGCCATCTAGAATCATCATGCCACCCATTCAACAGTCGTCTGTTTTGGCAAATAATAATCTGATCAAAACAGAAATGAATCTAATCAAAACAGAAGCTGTAGAAGTGGCGAGAGACTGA
- Protein Sequence
- MATAASTQYCLKWNNHRSNLLTVFDQLLKNEAFTDVTLACEGGAPMKCHKMVLAACSSYFQLLFTELPYKHTVVVLKDVTYIEMKALLEYMYKGMPGFQIPTPPPPPGIILNNCYEAAMSGSPNMSPLHRKKKLSNMLMNKDTPILRTVLGQGQGQPDSSQPPDHLEQSPRSNGSIGPEPPFYKKSDTSPEDAPSPYTDVSMMEDEINERNKLMLSSSQSPQSFYDGKGESSAVSSAIAVYVPPQKPEWKRYKQYTRNDILSAIEAVRNGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFKRSSNNNNNSNSLNYSYMYDRDRGEESNGMSYSINYGMNYGLPENNFMQQALEWRERERDLLERENNNNSNHNSLSPLHRSDSPSPNHIKYHHRDRTPSPTPPPEHDMEEDDQVEDLSMGRKTSRPSSPSPPSRIIMPPIQQSSVLANNNLIKTEMNLIKTEAVEVARD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01132317;
- 90% Identity
- iTF_01132317;
- 80% Identity
- iTF_01132317;