Pven016577.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- Mblk-1
- Assembly
- GCA_012654025.1
- Location
- CM022884.1:8707582-8711612[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-17 1.5e-14 53.6 0.0 1 42 37 79 37 82 0.94 2 2 1.5e-18 1.3e-15 57.0 0.0 1 43 433 476 433 478 0.95
Sequence Information
- Coding Sequence
- ATGTATTCATTGGATCTAGCATCACATCAGGAGATTGTCCACAATGTTGTGTTGAGATTCATCCTGGCAAAGCCACGGATAAGTGCAGTAGCCGGTAGAAGAACATACACCGAAGAAGAATTACAAGCTGCCTTAAGAGATATTCAAAGTGGTAAATTAGGCACAAGAAGAGCGGCGGTCATTTACGGCATTCCTAGATCTACTCTTAGAAATAAAGTGTACAAGCTAGCATTAGAAAGAGATAGGGATACTCATTTGTTAAATGCAAGTCCGCCAGTGGTAAGTAATGTTCCTTCGGATAGTAAAGTAGAAGACCTTTCCCGAGATATCATTGATGAAGACGAAGAAGACAGAGATTCGGCGGAAGAAGACGAAGAAAAAAGTTTATCAAAACCTATTCTCTCTATGGAAGATCTCATTAGGTTATCACAAGATACTCCAAATGATGCTCTCAGAGCAGATTCTCTCACAAGGTTGTTACTTCAATACGGTAGCAAGCAAGTGAGATCTGGTGAAAATGATTCGCCGTCACCACCCATTTATCCTCCAATCTATTCGGAATTGTGGCCGGGGATGGATCCTGCCGCTCTTCCATACCTGACTCAAATCATATCAGCCTCAGCTTCCAGTGGGAATTTTAATGCCCTAGGTGCAGCCGCCATATTGAATCCATTCCTTTTAGGAGCTCCTAGAAGAGCCTCACCTGAAGATAAATTACCTTCAGATCAACCACCTGATTTCTTGCCAAAACTTACACCCCTCCCTGACATAGTTCGTAGAATGATGACTGAGGAAcatcaaaagaaagaaagacaGTTTCCCTTTAATGGAAGTGGACCATCAACTTCTGTGATATCAGATAAGAGTTGTCAAGACCAAGCCGAGTCAaatcttattttaaaagttCCGTCCTTCCGACCCAACAAGAATGGAGTTGAATCTAGTCAAAGATCGCCCACTAGAAGCGAATCCTCATCTCCTACAGGGTCCGTGGGTAAGATGGGAATCAATTTGAGAGATGTTATTGCAAAGAGCATAAACCATAAGTTCAATCAACCTATAGAACCACATTTTCTGCAAACATCCCCTAGTTTAGATCATTTTAGAAGAGGACCTTTTACTCCTCCTATGGGAAGAAGTCATAACAATAATCACTTTGACGAAAGAAAATTGATTTCGCCTGGAGGGAAAACAATGGTAATGCCACCACATCATTTGTCAGGAAGTAGTAGTCCTGCTAATAATTCAGTAGGTGGAAAAGGCACCCGCCCTAAAAGaggaaaatatagaaattatgaCAGAGATAGTCTAGTAGAAGCAGTGAGAGCTGTTCAAAGAGGCGAAATGAGTGTCCACAGAGCTGGAAGTTATTACGGTGTTCCACATTCAACGTTAGAATACAAAGTCAAGGAAAGACATTTGATGCGACCGAGAAAAAGAGAACCAAAACCTCAACCTGacgatttgaaaagaaaagaagaaggcTTGCTAAGGGTACAACCTATtccagataaaaataaaatgtcaccTTTAAAGCAAACACCAAAGCCACCTTTCCCAACATCGTTACCTGGTACACCAAATGGACTTAAAATGCCACCAATGTTTGATCCTTCTATGCGATATCCTGGTGCTCCTCCAGGTTTTCCATTTTGGGCACCAAGCCCATTTCATCATCCTTTATCATTAGATTTTCCAAGAGGTCCTAATTTTGCACCCACTCCTGAACAATTTTTTGCATCACAAATGATGCAAAGAATGCATGAAGAGAATGCTGCAGCTACTGAAGCGAGTGGATCTTCACCACCAGTCCTTAGTGCATTAGGTAAAAACGCTAGAGAAGTAGCTGAAAGTTTATACGATGGATCACCGAATGGTAGTTTCTTAGACGGAATTATTCGATCGAGTTTAGAAACTGGTTTAAGTGCAAAACAAAGAGAAGAGCAATCTTCAAATAAAACTCTTTTAGAACAACTTTGTCGAAATAATCGACTATCAGATCCTAATAAACCAGATCAGTTGAGTAGTTCAGATGACGAACAGTCGACTCCAAATCGAACTCAATCACCAGAGTCAAAACATTCTAGGAATAATGATTCAGATTGTGACGTGAAAATGTCATCAGAAGAAACAAGTGTCTGTGATAATATAAAAGTAGAAAATGAAATAGATACGAAGAAAGAAGTAGAAGAAAGTGAAGAAAGAAGTAAAGGagaagaaattgaagtaaaaatgGAAACCGACTGA
- Protein Sequence
- MYSLDLASHQEIVHNVVLRFILAKPRISAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERDRDTHLLNASPPVVSNVPSDSKVEDLSRDIIDEDEEDRDSAEEDEEKSLSKPILSMEDLIRLSQDTPNDALRADSLTRLLLQYGSKQVRSGENDSPSPPIYPPIYSELWPGMDPAALPYLTQIISASASSGNFNALGAAAILNPFLLGAPRRASPEDKLPSDQPPDFLPKLTPLPDIVRRMMTEEHQKKERQFPFNGSGPSTSVISDKSCQDQAESNLILKVPSFRPNKNGVESSQRSPTRSESSSPTGSVGKMGINLRDVIAKSINHKFNQPIEPHFLQTSPSLDHFRRGPFTPPMGRSHNNNHFDERKLISPGGKTMVMPPHHLSGSSSPANNSVGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDDLKRKEEGLLRVQPIPDKNKMSPLKQTPKPPFPTSLPGTPNGLKMPPMFDPSMRYPGAPPGFPFWAPSPFHHPLSLDFPRGPNFAPTPEQFFASQMMQRMHEENAAATEASGSSPPVLSALGKNAREVAESLYDGSPNGSFLDGIIRSSLETGLSAKQREEQSSNKTLLEQLCRNNRLSDPNKPDQLSSSDDEQSTPNRTQSPESKHSRNNDSDCDVKMSSEETSVCDNIKVENEIDTKKEVEESEERSKGEEIEVKMETD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -