Basic Information

Gene Symbol
ct
Assembly
GCA_012654025.1
Location
CM022881.1:24249626-24262158[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-32 3.6e-28 97.6 0.0 2 77 325 401 324 403 0.96
2 2 8.7e-31 6e-27 93.7 0.0 3 76 541 615 539 618 0.96

Sequence Information

Coding Sequence
ATGCATTCAATATTTAACAAATCTGAGCCGGATATCAATGACGACAGACTGGCACATATCTTGAACGAAGCAGGCCATCTCATGAGGAACCATGTCAATGAGCAGGATAGTAGGAGTAATGATGATGCTTCTCCTCATCATGGTCAGTGTCCCTCACCATTGAGTCGTGAAAATTCTCTTAATAGGAGACTAAAGAAGTATGAAAATGATGACATACCACAAGAGCAAGTTGTTCGAATTTATCAAGAAGAACTAGCCAAATTGATGGGAAGACGATTCGACGAATCTCAACCTTTTCCAAGTTTATTGTTTCCCCACTttttcaacaacaatatcaacaatattCCAACCAATGAACAAGAAATCAGATTAGCTTTGGATACATACCATAGAGAATTAGCTAAACTAAACCAAAACTCACAAACTCAGTCACCTAATTTaactataccaaattttttattacatccGTCATTAGGAGGTCTTCAACAATTAAGTCAAAATGTACAAGATCTTTCCGTAcctaaatcaaataataatatgtccGATAGAAAATTATCAACGTGTTCAAATTTATCTGATAAGAATATACAAAACGGAGATTCTAATATTTTAGATTCACCAATAGACAGAAAAGAATCAGGTGGAAAAACACCCGATAGCGTTTCAACGACAGATTCAATGCGACCACATTCTTCGGTTTCTGCATTCTCATTGGTCAGGCCGAAAATTGAACCTGGAATACCCTCTGTAGGTGGAGGTGGTGGTGGTAGTACTGCAAGTTCTCCATTAGGTAATTCAATTATTCTTCCCCCAGAAGATTTTTCACCTTCTGCCGCATCTAGTCCTTTACAAAGAATGGCATCCATTACAAATGCTCTCATATCTCAACCATCAACACCACATCATCATCCATCTTCACAAAGACCATTGAAAGCTGTTCTACCGCCTATAACGCAGCAACAATTTGATCAgtacaataatttaaatacaGAGGATATTGTTCGACGGGTAAAGGAACAACTTAGTCAATTTTCAATTAGTCAAAGACTGTTTGGTGAATCCGTTCTGGGTTTATCACAAGGATCAGTATCAGATTTACTAGCCCGACCAAAACCTTGGCATATGTTAACACAAAAAGGTCGAGAACCTTTTATTcgaatgaaaatgtttttagaaGATGATAATGCCGTTCATAAATTGGTTGCCTCTCAATATAAAATCGCTCCTGAGAAACTTATGAGAACTGGTGGCTATGGCGGACCTCCAATATTACCACATGCAATGGGTAAACCTCTACAGCCATCTGCTCTAACACCAACATCTCTCAGCAAACAAAATATAGAAGAACGAGATCGTGAGAGAGATAATAGTCGCGAACGTACTGACATGCGCCAACATTTCATGACTTCGCCCCAACACAATATGTACCAACATCATttggaaaacttgaaaaaacaaaGCCAAAACATTCCTCCACCTCCTCAGTCTCCTCATGGTGTTGTTCTTCAACAACAAGCAGCAGCTCAAGCCCAGGCACAAGCTCAACAACAAGTGAATGCGGCGTTGAGAAATTTAGGTCAACATGTAGCGCCCAGTGTTTATGAAATGGCGGCCCTGACGCAAGATTTAGATACTCAAGTAATCACGACCAAAATCAAAGAAGCTCTATTGGCGAATAACATTGGACAAAAGATATTTGGTGAAGCAGTTTTAGGATTATCTCAAGGATCAGTTAGTGAACTTTTATCTAAACCAAAACCATGGCATATGTTGAGTATTAAAGGTCGTGAACCATTTATTCGAATGCAACTTTGGTTATCAGATACTCACAATGTAGAAAGACTTCAAGCTATTAAAACTGAAAGACGGGAACTTAGCAAAAGACGGAGAGGATCAGGCGCTCAGGACAACAGTGATGACACCTCATCCAATGACACCTCAGACTTCTATGTTAGTAACAATAGTCCTCCCTCCTCAGCCAAAAAACAACGGGTTCTCTTCTCTGAAGAACAAAAGGAAGCTCTTCGACTTGCTTTTACATTAGATCCATATCCAAGTGTTAATACGATCGAATTTTTAGCCAATGAATTAAATTTAGCCTCTCGAACAATAACAAACTGGTTTCACAATCACCGAATGAGATTGAAACAACATAATCCAAATTCAAATCCTACCGAAATATCACGAGAACAACCAAACAGTAGTGGATTTGATCCAATCCAATTTAGATTATTATTAAGTCAACGATTAGCtggattaaataatttaaatattcctCCGCTATTAGCTAATCCATATTTCCCTGGAAATCCAGATTTAGCCAATTTAATGCGAGGGTTCCCTTTAACAAATGAACAAATGTATGGACTCGACTTGAGTGTGAAACAGCAATATGGCCAAAGTGATGTTGAAGGAGATGATGACATGAATGAGTCAGACTGTGAACAGATGACAGATGAGCACACCTCAATGAGGTCGTTAaacatagaaaaagaaaatatcgaatCAAGATCTTCGAGGAGGAAACCCGCAGCACCGCAATGGgtAAATCCAGACTGGCAAGAAGCAGAACCTGAAGTAATTATTAATGGAGTATGTGTAATGCAAACATCCGATGATTACCGATCTTCATCGAAAGATGAAACAATTCGTATTGAACCCACTCCTGtacaagaagaagatgatgacgatgatgatgatgatgatcaagCTGAGACTGAACTAAGATCTCCTAAAACGACTGATAGATGTATTAAAACAGAGAGATCCTCATCTGCTGACATCAAACGTGAACACGACGAACCAAATGATGTTcatataaaaagagaaatggAGGCAGAAGATAACgaattttaa
Protein Sequence
MHSIFNKSEPDINDDRLAHILNEAGHLMRNHVNEQDSRSNDDASPHHGQCPSPLSRENSLNRRLKKYENDDIPQEQVVRIYQEELAKLMGRRFDESQPFPSLLFPHFFNNNINNIPTNEQEIRLALDTYHRELAKLNQNSQTQSPNLTIPNFLLHPSLGGLQQLSQNVQDLSVPKSNNNMSDRKLSTCSNLSDKNIQNGDSNILDSPIDRKESGGKTPDSVSTTDSMRPHSSVSAFSLVRPKIEPGIPSVGGGGGGSTASSPLGNSIILPPEDFSPSAASSPLQRMASITNALISQPSTPHHHPSSQRPLKAVLPPITQQQFDQYNNLNTEDIVRRVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGPPILPHAMGKPLQPSALTPTSLSKQNIEERDRERDNSRERTDMRQHFMTSPQHNMYQHHLENLKKQSQNIPPPPQSPHGVVLQQQAAAQAQAQAQQQVNAALRNLGQHVAPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDTHNVERLQAIKTERRELSKRRRGSGAQDNSDDTSSNDTSDFYVSNNSPPSSAKKQRVLFSEEQKEALRLAFTLDPYPSVNTIEFLANELNLASRTITNWFHNHRMRLKQHNPNSNPTEISREQPNSSGFDPIQFRLLLSQRLAGLNNLNIPPLLANPYFPGNPDLANLMRGFPLTNEQMYGLDLSVKQQYGQSDVEGDDDMNESDCEQMTDEHTSMRSLNIEKENIESRSSRRKPAAPQWVNPDWQEAEPEVIINGVCVMQTSDDYRSSSKDETIRIEPTPVQEEDDDDDDDDDQAETELRSPKTTDRCIKTERSSSADIKREHDEPNDVHIKREMEAEDNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01132091;
90% Identity
iTF_01132091;
80% Identity
iTF_01132091;