Pven004465.1
Basic Information
- Insect
- Pachypsylla venusta
- Gene Symbol
- kn
- Assembly
- GCA_012654025.1
- Location
- JAAEEI010001431.1:9608-15692[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-64 4e-60 203.9 0.1 292 387 83 178 76 183 0.97 2 2 7.6e-08 0.0016 17.1 6.8 414 482 182 254 178 264 0.68
Sequence Information
- Coding Sequence
- ATGTGCTATTCCACACCTAACATCAAACAGCATTACAATTCAAGAAAGCTTTGTGCTCTTCCACAACTAACATCAAACAGCATTACAATTCGAGAAAACTATGTGCTATTCTACACCCAACATCAAACAGCATTACAATTCGAGAAAGCTATGTGCTCTTCCACACCTAACATCAAACAGCATTACAATTCGAGAAAGCTATGTGCTATTCTACACCTAACATCAAACAGCATTACAATTCGAGAAAGCTATCTAATAACATCACATGCAATCAGAGTACAAACGCCGCCCCGACACATCCCTGGCGTTGTAGAGGTCACCCTGTCCTATAAGTCAAAACAGTTTTGTAAAGGCTCTCCTGGAAGATTTGTTTATGTTTcTTTGAATGAACCCACAATAGACTATGGATTTCAAAGGTTACAAAAGCTAATACCAAGGCATCCTGGAGATCCTGAAAAACTACCGAAGgAAATCATCCTAAAGAGAGCAGCAGATCTAGCAGAGGCCCTGTACAGTATGCCACGCAACAATCAACTTTCTCTCACAGGTCCAAGGTCTCCAAACAATTCAATGGCCGCCTTTAATTCATATACTGGTCAGCTCAATGTAACGGTCCAGGAGAACGGAAACGGTCAGTGGACTGAAGatGAATACGGCAGAACGCAGAGTAGTAGTGTGTCACCCCGAGGTGGGGGTTATGGCTCCAGTGCTTCCACACCGCACTCCTCTAATGGAGGGTATACGACAACCAATGGGAATACACCAAACAACATGAACGGTATGTACAAAAAAGTGACCTTGTGA
- Protein Sequence
- MCYSTPNIKQHYNSRKLCALPQLTSNSITIRENYVLFYTQHQTALQFEKAMCSSTPNIKQHYNSRKLCAILHLTSNSITIRESYLITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLTGPRSPNNSMAAFNSYTGQLNVTVQENGNGQWTEDEYGRTQSSSVSPRGGGYGSSASTPHSSNGGYTTTNGNTPNNMNGMYKKVTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01131969;
- 90% Identity
- iTF_01131969;
- 80% Identity
- iTF_01131969;