Basic Information

Gene Symbol
ARID4B_1
Assembly
GCA_012654025.1
Location
CM022878.1:8852423-8872671[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-27 1.8e-23 82.9 0.2 1 89 301 386 301 386 0.94

Sequence Information

Coding Sequence
ATGACTAGTAGAGaagtgaagaaagaaaaaatgggagaTGATCCACCATACCTTGCTGTTGGCACAGATGTTAGTGCCAAATATAAGGGAGCTTTCTGTGAAGCTAAAGTGAGGAAAGTCGTAAGAGTTGTCAAGTGTAAAGTTCTTTTGAAGAATGGAGGCTCTGCATTTGTTACGGATGATCAAATCAAAGGAAATTTAAGGATTGGTACAACAGTTGAGGTGAAATTGACAGATAAAAAAGAGCTCGTTGAAGCAAGTATAGTTAGCATAAAGGATTTAAGTCAGTATACTGTTGtatttgatGACGGGGACATCACAACATTGAGAAGAACAGCCTTATGTTTGAAAAGTGGAAGACATTTTGCTGAAAGTGAAACGCTGGACCAGCTTCCCCTGACTCATCCAGAACATTTCTCTACACCTGTCATGGGAGGTCCAAGAAGAGGTCGCCGTCGTCCTGGAAATGAGGACAGTTCGGACGAAGAAGGTTCAACCAAAGAAAAGCAAAAAGAAGTAGATATAGGCAAAGTAGTTTGTGTGGAAATCAGCgagaagaaaaaacagaaagacAATTGGTTTCCTGGTTTAATTGTAGCACCTAATGCACAGGATGCTGTACGTATTGATGTTGACGAAGATTATTTGGTGCGAAGCTTCAAAGATGGTCGATAcTTTACAGTACCGAAAAAAGAAGCTACTGAATTTACCCGTGAGATTGGACTAAAAGTAGACAACCCTACTTTAAAGTTGGCCGTAGAGAAAGCTCTTCTATTTTTGGACAAAGATGATTTGCCACCTCACTGGGATAGAGATTTACTATTTGGACTGGTAGAAAGTGATATAGATGAAGATAGCGATCAGTTAGATAGTGAAagTTCTGATGATGAACCTCGAGAAGAAAAGGATCATTTTGTTGCTCAACTTTACAAGTTCATGGATGACCGGGGTACTCCGATTAACAAAGGTCCAGTTATAGCGTCGAAGGATGTTGATTTGTACAAATTGTTTAGAGTTGTTCACAAGATGGGTGGATACAATCGAGTCACAAATCACAATCAGTGGAAACTAGTTACTCACAAAATGAGTTTCAGTCAAAATATGGCAACTGTAAATTCTGTAAAGCTTGcttataaaaaGTTTCTTCATAGTTTTGAAGACTTCTACAGAAAGTTAGGTTGTACGATGGTGAATCATCCACGGGGAAATAGACGCAGTAATAAATCAAACAGAAGTCTAATTAGGGACAAAGATAGAGCAACACCAGTCATTAAGGAAAACGATCGGGAGAAAACAATAGAACCTAGCACATGTGTAGTAGAAATCAAAGATGGTGGACGTGAAGAAAGGGAAGTTCGAGTAGAGcttaaaaaagaagaggaaacacCAAGAAGAGAAGAAAGAAGAATTAAGAAAGAAGACGACAGCAGTAAAAAGTCTAGGAAAGAGGAAGATGtaagaaaagataaaacaaataaaaaagaagaagaaatcaagaaggaaaagaaaaaggagCGTGAAGTAAAGAAAGAAGATGAGCATAGGCGTGACAAACTTGTCATAAAGgaagttaaggaagaaaaaaaagaagaaccaATGATAACTttagcaaaaaagaaaatcgaggagacatttaaaattaataaagatattGGAAAGCCAAAGACAGACGATAAACCCAAGAGTAGCATTGGCATTTTAGCAAAgttttcctataaaaaagataaacaacCTACCAAAGATAGACCAGAAGATAAAGATAGATTAAATAAAGTAAGAAGAACGTTGCAAATGAAAGGCAGCGGAGGTCTAATGGAGAGACAAAAACGCTCAATAACTGAAAAAATGAAATCGTTTGCTAAAAGTTTAGGATTTGGAAAAAGTAATAGTGGCACTGTAGGAGCGACAACTGCAAGAAAGATATCAGTCAGCGGCAGTGGGGaagatgaagaaaagaaaaagaagcaagTCGAGGAACCAATTGTATCCATTGAAAAGaaacgTGTGAGTAGCTGTAAATCCAAAGAAGAATCTCCTTCTGCGAGTACACCTTTACCATCACAAATTAAACTCAGAAAGAATTCAACAACTGCTGAAAACGCTCCTTGTGTGAGGTCAAGCAAGAAAAGTTCTGATGAAGATACTCTTTCTCCAGACTCGAGCAAAAAATCAAACAGATTGCATCGGACTAAGAAAAAGGAGGATGACGAAGGAAGTAGTCACAGTGAAAATTCCGAACAATTACCTTTGGATGTCGTAAGTCCTCAGACACCTATTTCTGTCGGTGATAAATTGAAAGTCTATTACGGCCCAAACCATAAATCAAAAGTAACCTATGAAGCTAAAGTTATGAGTACTCGAGAAGAAGATGGCACAGAAATGGAATATTTGGTTCACTATACGGGTTGGAATATCCGATATGATGAATGGATTAAAAGAAATCGAATTGCCGAAAATTTAACTTGGGCGCCTTCACGATCGTCTAAAAGAATCAGTGTCAACAAGCCACCGACAGAATCGCCATCTCAACCTCCATCAATGCGGCCTAATGAGACAACTTCGACTGGAACATCCACGCCTTCTTCATCATCCAAAGCCAAACCATTAGTTCGAAGGCCTTCAAGTAGAAATCTCAACAAACCACCGAATCGACCTTCCACACGCAGTGCGCGAACTAATACAGaTGATTCTGACTCCGGTAAAGATTCTGATTCTGATGAAAGTGAAAATGAAGAAATCAGTGGCAGTAATCGAAGTATGAGAAGTCGACGAATTCGTTCTGACCTAGCCAGTTCTTTAAGtgatgaagataaaaaaataatcaaacgaAAACCTAAACTAGCCAGAACTGGAGAAGATGGTGACGACGAGGACGAAGGAGATGATGATAAACCGAAAGGAGATGAATcagttgaaaaacaaaatgaagaagaGGAAAATTCAGAGTCCCATGAAGTAGAACGCAAAAGTCTTAGACTGTCGCAAAGGAAAAACAAAGagagagaaattgaaaaacgTCTGTGCTCTGACTCAGATTCAGAAGGAGAAGACGAAATTAAAGCTACAGTTTTAGAAATTATTGAACCTAAAGGGGATACTCTAGATGATGTTTATGAATTTAAAGAGCCCGAACCTTTTGATTTTAACAAGCAAAAGAAAACTATCAGTCCTCCAGgaaagaaatcaaagaaaagtATAGGACTATTTGAAGATTATGACAACACAGACGAAGAAACTGATGACCCGATCAGTGCGGCTATTCAAAGAGTCATGGACAGTGAATTAGACAGCTCCACTGAAAATGAAATTGACATGGATTTGCTTgaagtgaaaaataaagataaagccTCGAGTGATTCCAGTTGCAGTGGAAGTGGAGATGAACAAACTGGAAGCTCCATGTTTGAGATGATAAAGAAGAGATTTCAATCGGAAATCAATACTTACGAAGGTCCAAAATCTAAATCAAAAATTGACAAGTCTGAGTCCGTAAGAACCAGAAAATCGTCTGAAACGAGCAATGAAAATGTCAAATCTAAAAAGTCAGACAGCtcctttgaaaaattaaaacctaGACATAACAATgataatacagaaaaaaatgaaaatagtggATCCTTCGGAAAATCGAAAACATCTAAAGCCGATATCGATTCTGCTATCAAACTATGCAAAAATACCGAGAAAGAATCTGAGATATCAAAATATCCAACTTCTTCGAACAAAAAAGATTCAGTCAATGTTGAAAATGTGAAGCAAGAGACACCAAAGATAAAGTCAAAAATTTTAACTCCCGAGTCAATGAAAACTCgatttaaaaatgatttgaGTAGGTCAGAATCTCCTGGTAGTAAAACTAGAAgcagaactgacctaaaaaaaattgaagaacagAGAAAATCGCCTGAACCATTGAAAGTTAGACAGAAAATTGACATGAGTTCAGATTTAAGTAAAGAAGACATTTCCAAATGTAAATTAGAATCAATGTTGGTGGAATCAAAACTAACTGAGACTCCCCTAAAACCGAAAACTAAAACGGatagttttttgtttaaatcaaGCACAGAAAAAGATGGATCCAATATTGATACGAAATTACTGTTTGATTCccaaaagaaagacggagataATACAAAACACAAGTTGGAAAGCTCAACAACGTCTAACTTAagtgaaaatattgaaactgTTGGACACATCAAAAAAACTTCTAAAGACACGCCAAAAGATAAATCTCTAAACAAAGGAAAAGACACTGAGCAAAACAAAACACGATCTGGTTTAGTTCAAACTGATAATTTAATTGAACAGAAAAGCAAAAGTGAGAGCCAAACATCTGTTGTatcgaaattgaaaaatataaaacctacTGTAGATACAAAATCAGAACTGGGGATCAAACCTTGTGATAGCTCAAAATTGACTACTTCAAGAACAAAAAATCCCCCACCGTCTGGTTTTGGCAAAACCGAAACTTCTTTCAAACCGAAATTAAAAACTAAGCCTTTGCCTAaaacagaatttgaaaaaaatacgtcTTTCGACTCAGATACTTTAAAAGTCAACTCTAAATCAGACAAAAGCCACATGGATTCTTCAATTCAAACTGAATTTACGCTTGGTGAGGACGAGCCTTCATGCGGCAATAccagtttgaagtctattactGGTGTCAAAATAAGTTCTGATGAGCACACGTGCATGGTAACTTCATCGCCTAAAGCCCAGAAAGCAGAATTTTTCAAAGGATTTTCCGGTCCATCTAATCTTACGACATTAAACATTGATTTCACTACGAGCAAATCAACAGACATTCCTATCttgcaaaaaatagaaaaagttgTTCCTAAAACACCCATCAAATGTGAAATTATTGACCCAAACAAAATAGACTTGATTAAAATAAGTCCGAGCATGCCtcaattggagaaaattgatgCCTACGGTGAAATAATAACTCCCACCAAAAAAGATGATACAGGGGATGTTAAATTAGACCAACTTAAAAAGACTTACATTAAATTTGACGATATTACTGAAACGCCTGAAAAGTTGTTTGTCCTAGCAACAGACCAAGACGacgaaagtaaaaatacaccAAATAAATCTACAAATAATAACCCAAACCAAATAGACATGAGTGCAATCAGTCCAAGTATGCCTCCACTGGAGAAAATTAAGCCGCCTAGTGAAATGACCTTGGTTAAGAGAGCCGATGTAAATTTGATTCAAACCAGTCCCTGTATGCCTCCATTGGAAAAAATCCATGCTTTTGATAAATTAACTACCTCAGTtccaaagaaagaaataaattctGTTGGTATAACCCCCattaagaaagaagaaaatagtgATATTTATTTGGAACAATTAAAAGTTACTCATTCAAAACTAGACTCTACTTCTGAAACACCTGAAAAGGTAATTGTATTAGGAATGGATAAAGAcgacgaaaagaaaaaaatagcaaacaaAACTCCAGACAGTAAAATAGAGTTCAAAATGAAGCCCAAATCCTCATCTCCATCTTTTGGCAGAGCACGAAAACTCATTAGACATCGACCAGGTGATTCacctaaaaaaaatgataagaaggAAATGGATCTAAACAACAaatccaaagaaaaaaatagtaaaatcgcAACACCAACTCCAAGTAACAAATTCGAACTTGAGAAGCCCATAGCAAAAACTGGGGAAAAATTATTGGGCTTTGACAACATAAACATAGATAAAAGTTCTAATTCTGGAACAATTTCGAAAACGGAATcaccaaacaaaaatattagttCTAAAATAAGAGTGAAATCTGAAACTGattccaaagaaaaaacaaaagatcaaaaattattaattgaaGTAGGTAAAACTGATGTtcgcaatttaaatatttctgacACTATTCAAAACACAATAGAAAGCGTAATAAGATCAAGTTCGGAATCTGTCAAAACACAAGTGGAAAGAATTGAAAGGGTTACGAATgagaatcaaaacaaaattaagaaagaaatcAATGACAAGAAAAAAGACGTAACTCTTCTAGGAGATGACAAACCATTGAATAAAGCAAATAGTaataaagataaagtaaaagaaATGGAAACGACACCCGATattgttaaaaaagaaaatataacaaAAGCAAATGATGACGACAGTAAAGacaaaaaagaattgaaaacagAACCAGAGTCtcctaaaaaagaagaaaaatccaaAGAAGAACTATCGAGCGTGTTTGAATTTGACGAAACATTGGAGGACGACATTGAAAGTGAGtcttatattttgaaaagaaaaatacaccaATTAGAAAGTAGTCCTCTTGGAAGCAGTAATAGCGAATTTATGAAAAGCAAAATGCAGAAATTAAATGAATTggagaaattaaaacaaaaattattcttAGACAGTAGcggagaaaatgaagaattacTTGATAGCGCTGAGAGTAAGGTGCATGATGAACAATCGAAATCTGAATATGAAGCATAcgttcaaaaagaagaagaagataagttATCAAGTTCAAGTAATGTGCAGGAGACGGGAGattcaaatgagaaaaaaacagATGAAACCTTGTCCGTTAAAGCAGAGGAAACCTTGgaagaagaggaagaagtgGACAATGCTCTTCTCTGCAAGGAAACAATCCCAGGCAGTCCAACTCCATATCAAGACGAGCTGAATCTCATTATGGAATTACCTAGCACGAGCAATGCTATTGCTGTTATGGACAATACACCACCTACCACACCTGACTCCAGTCTTTCTTCGCCCCGAGATGGGTCTTCGCCTCCTTCTGCAGAAAAATGCGAAACAGATTCTGCTGTTTACACAAAAATACTCTCGGATGAAAGTCCAAGGAAAAGTGGAATGAAAAGAAGAAGCAGTCATAATGAACGGACATTGAAGAAAAGAATTAAGCAAAGTCCACGTACACATACAGGTGGAAGTGATAGTGATGAACACTCCCTCTCAGAGTCATTCAGTATTATGTCCTTCAACAATGATCTCAAATCTAAATACTTCATAGAGTTTGaTCCCAAACTAGATCAAGCACAGAAAATAGCTGTGATACAACAAAAACTTCAAGATCTTCGCAAGGAATATGTTATGTATAAACAAGAACTGGTCAGTATAGATAGAcgacgaaaaaaaatccgacgaagagaaagagaattaaaaaagaataacgATCTTGCCACGCGAGTGAGTCCTCCTGTGGCTGCAACGTCATGA
Protein Sequence
MTSREVKKEKMGDDPPYLAVGTDVSAKYKGAFCEAKVRKVVRVVKCKVLLKNGGSAFVTDDQIKGNLRIGTTVEVKLTDKKELVEASIVSIKDLSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSTPVMGGPRRGRRRPGNEDSSDEEGSTKEKQKEVDIGKVVCVEISEKKKQKDNWFPGLIVAPNAQDAVRIDVDEDYLVRSFKDGRYFTVPKKEATEFTREIGLKVDNPTLKLAVEKALLFLDKDDLPPHWDRDLLFGLVESDIDEDSDQLDSESSDDEPREEKDHFVAQLYKFMDDRGTPINKGPVIASKDVDLYKLFRVVHKMGGYNRVTNHNQWKLVTHKMSFSQNMATVNSVKLAYKKFLHSFEDFYRKLGCTMVNHPRGNRRSNKSNRSLIRDKDRATPVIKENDREKTIEPSTCVVEIKDGGREEREVRVELKKEEETPRREERRIKKEDDSSKKSRKEEDVRKDKTNKKEEEIKKEKKKEREVKKEDEHRRDKLVIKEVKEEKKEEPMITLAKKKIEETFKINKDIGKPKTDDKPKSSIGILAKFSYKKDKQPTKDRPEDKDRLNKVRRTLQMKGSGGLMERQKRSITEKMKSFAKSLGFGKSNSGTVGATTARKISVSGSGEDEEKKKKQVEEPIVSIEKKRVSSCKSKEESPSASTPLPSQIKLRKNSTTAENAPCVRSSKKSSDEDTLSPDSSKKSNRLHRTKKKEDDEGSSHSENSEQLPLDVVSPQTPISVGDKLKVYYGPNHKSKVTYEAKVMSTREEDGTEMEYLVHYTGWNIRYDEWIKRNRIAENLTWAPSRSSKRISVNKPPTESPSQPPSMRPNETTSTGTSTPSSSSKAKPLVRRPSSRNLNKPPNRPSTRSARTNTDDSDSGKDSDSDESENEEISGSNRSMRSRRIRSDLASSLSDEDKKIIKRKPKLARTGEDGDDEDEGDDDKPKGDESVEKQNEEEENSESHEVERKSLRLSQRKNKEREIEKRLCSDSDSEGEDEIKATVLEIIEPKGDTLDDVYEFKEPEPFDFNKQKKTISPPGKKSKKSIGLFEDYDNTDEETDDPISAAIQRVMDSELDSSTENEIDMDLLEVKNKDKASSDSSCSGSGDEQTGSSMFEMIKKRFQSEINTYEGPKSKSKIDKSESVRTRKSSETSNENVKSKKSDSSFEKLKPRHNNDNTEKNENSGSFGKSKTSKADIDSAIKLCKNTEKESEISKYPTSSNKKDSVNVENVKQETPKIKSKILTPESMKTRFKNDLSRSESPGSKTRSRTDLKKIEEQRKSPEPLKVRQKIDMSSDLSKEDISKCKLESMLVESKLTETPLKPKTKTDSFLFKSSTEKDGSNIDTKLLFDSQKKDGDNTKHKLESSTTSNLSENIETVGHIKKTSKDTPKDKSLNKGKDTEQNKTRSGLVQTDNLIEQKSKSESQTSVVSKLKNIKPTVDTKSELGIKPCDSSKLTTSRTKNPPPSGFGKTETSFKPKLKTKPLPKTEFEKNTSFDSDTLKVNSKSDKSHMDSSIQTEFTLGEDEPSCGNTSLKSITGVKISSDEHTCMVTSSPKAQKAEFFKGFSGPSNLTTLNIDFTTSKSTDIPILQKIEKVVPKTPIKCEIIDPNKIDLIKISPSMPQLEKIDAYGEIITPTKKDDTGDVKLDQLKKTYIKFDDITETPEKLFVLATDQDDESKNTPNKSTNNNPNQIDMSAISPSMPPLEKIKPPSEMTLVKRADVNLIQTSPCMPPLEKIHAFDKLTTSVPKKEINSVGITPIKKEENSDIYLEQLKVTHSKLDSTSETPEKVIVLGMDKDDEKKKIANKTPDSKIEFKMKPKSSSPSFGRARKLIRHRPGDSPKKNDKKEMDLNNKSKEKNSKIATPTPSNKFELEKPIAKTGEKLLGFDNINIDKSSNSGTISKTESPNKNISSKIRVKSETDSKEKTKDQKLLIEVGKTDVRNLNISDTIQNTIESVIRSSSESVKTQVERIERVTNENQNKIKKEINDKKKDVTLLGDDKPLNKANSNKDKVKEMETTPDIVKKENITKANDDDSKDKKELKTEPESPKKEEKSKEELSSVFEFDETLEDDIESESYILKRKIHQLESSPLGSSNSEFMKSKMQKLNELEKLKQKLFLDSSGENEELLDSAESKVHDEQSKSEYEAYVQKEEEDKLSSSSNVQETGDSNEKKTDETLSVKAEETLEEEEEVDNALLCKETIPGSPTPYQDELNLIMELPSTSNAIAVMDNTPPTTPDSSLSSPRDGSSPPSAEKCETDSAVYTKILSDESPRKSGMKRRSSHNERTLKKRIKQSPRTHTGGSDSDEHSLSESFSIMSFNNDLKSKYFIEFDPKLDQAQKIAVIQQKLQDLRKEYVMYKQELVSIDRRRKKIRRRERELKKNNDLATRVSPPVAATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-