Basic Information

Gene Symbol
stc
Assembly
GCA_036926295.1
Location
JAVFKF010000009.1:43244163-43264488[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.16 4.7e+03 -0.0 0.3 4 10 543 549 542 551 0.95
2 12 1.7e-07 0.005 19.1 14.2 3 19 560 576 559 576 0.93
3 12 7e-09 0.00021 23.5 13.4 1 18 612 629 612 630 0.97
4 12 0.7 2.1e+04 -2.1 1.5 7 13 634 640 634 641 0.81
5 12 4.1e-10 1.2e-05 27.4 12.2 1 19 670 688 670 688 0.98
6 12 3.8e-05 1.1 11.5 18.7 1 19 733 755 733 755 0.87
7 12 0.0015 46 6.4 7.1 1 11 795 805 795 806 0.96
8 12 1.5e-09 4.6e-05 25.6 13.3 1 19 822 840 822 840 0.98
9 12 3 9e+04 -6.7 11.2 1 18 879 896 879 897 0.65
10 12 8e-08 0.0024 20.1 6.8 1 15 933 947 933 949 0.97
11 12 3 9e+04 -5.2 2.0 6 10 964 968 964 968 0.85
12 12 5.5e-06 0.16 14.2 14.6 1 19 975 994 975 994 0.97

Sequence Information

Coding Sequence
ATGGACAATTGGAATAACTCTTACCCTTATTGTGGGGATCCCATGGAATTCTTTAGCATGTATGAGCTTCAGCAACGAATGGGAGCCCTTCAGTGCACTCCACAAATGGGGTACAATCATATGCCTGCTGTATCACCAGCACCTATTGCTACTGGGCCAGTACAACCTACTTCTTTGGAATATGTGGAAAGAACTCTCATGGCTCAAAATCATCCCCCCGTTGCAATGTCTTATGAAAACTCCAATCCAGTATTTTTGCCTGAAACTAATAGCAGTGATGGGTTTCCGACTGCGTTGTCAGTAGGATCGGACTCCAACATTCCTACCTATCTTCCTCCCGCAGAATGGTTAGGTCTTCAACCAGTTTCCGATGCCCATAACCCACCTGCTCCTCCTCCTCAGAGGAGTAGACGCCCTGCAAACGTTTCAACGAGAATACGCACAGGCAACCGTACACCAAGTGGTCGTGTTTTCGGTGGCAGTGGGAGAAATAATCCGCAGTGGTCTTCCAACGATTCAACACATCCGAATCAAGAGTATGCTGAGCCGCAGCCAAGAGCAGAGAATATTGATACCTATGGTGCATCAGAGAGGCCAGCACATTTCTCAGACAGCAGCCGAGGTTTCCGGGGATCAAACCGAAGGAAGAATGGGGGAACGTGGACTCGCGGTAATCGCGGATCATCCAGAGGTGCATCTTCGGGACGAAACGAGCCGTTTTCCTATTCCTCCAACAGTCAGAACGGGCGAGACGAAAGGAATCGAGAGCGCCGAAGACTTCTGGAAGAGACAGCCGCTTTCCTCAACGCTTCCCAATCCGAAGGGGGTGCAAACAGTCGCGAAAAAGTTAACGAGCCGCCTGAGAATCCAAGAAACCGTCAAGATAACCGCAGGAACCGACAAAATAATAGGAGGCAGCCGCAGATGGAGAATGAGCCTACTCCTGCAGAAGGGGAGGGGAACCCTCGCAAAGTTCGTGAGGACGAAAAGGCAGGCGAAGGAAGGAACCGtaaggaagatcagagaaatattgTCGAAAATGGTAAAACACAGTATGAAGGACGGAGGAATCACGATAATCCCAGGTTCAAAAATGACGGCTGGAGGAATCAAAATGATGTCGGGAGGAAGGCGACTGGGGATACTTCCTTCGGTTATGGAGGAGGGAGAGATTGGAGAAATTACAACCAGGGCCCAAGAAGTAACATAtcaggagaaagaaagaaagactcGGATTCTTGGAGATCCCGGAGAGAACGAGATCAAGATATGAGGGATAAGAAAAGGGAGAATGGTCAAACCTTAAGCGAAGAGAACAAAACCACTGATACGAGAGAGAATGAGGCCAGCAGGCGAGAAAAGTTAGAAGATCAACTTAGGAGGGGAAATTATGAATGTATGGTTTGCTGTGATTTAGTAAGACAGAGAGATTCCATCTGGAGCTGTGGTAGCTGCTTCCATGTATTCCATCTAAAATGTATCAAGCAATGGGCTCGTACCTCCCGCAGTGATGATAATGGTTGGCGCTGTCCTGCTTGTCAGACTGTGAGGGAGTCAGTACCATATGATTGTTTGTGTTTCTGTGGCAAAGTGAAAGATCCTGAGTGGAATCGTCGTGATACTCCTCATTCTTGTGGAGAAGTGTGTGGGAAAAGTCACGAAGTTCCTGCTCATTGCATGCACACTTGCACTTTGCTTTGCCACCCAGGGCCCTGTCCACCATGTACAGCAATGGTTACAAGGAACTGTGAATGTAACAAAACATCTCAAGTTGTGATCTGTGGTAGGAGTCAGGCTCTTTTGTGTGGAGCAACTTGTGAGAAAGTTCTCAATTGCGGTATGCACAAATGCTCAAAATTGTGTCATGAAGGTCCATGTGGTGACTGTGAAGTGATTGTGAAACAAGTTTGCCATTGTGGGAAGAATGAAAGAAGTATTGTATGTGACTCCACCTCTGCTGGGGTAGAATTTTATGCATGTGAGTCGCAATGTGGTCACACATTGGATTGTGGAAATCACAAGTGTGAAGCTTTGTGTCATCCAGGGGACTGCATTCCTTGTAGCCTAAATCCAAAGCTTATCACCAAGTGCCCATGTGGGAAAGCTGACCTATCTAGCATTGAAGGAGCAACTGAAAGAATGAGTTGTTTAGATCCCATACCCACATGTGGAAAAGTGTGTGAGAAAGTGCTCAGCTGTGGTCAACCTGgTAAACATCATCTTTGCAAGTCTGAGTGTCATGAAGGCCCTTGTCCACCATGCCCTCTCACTACAGCAGTCAGATGTCGTTGTGGTAATATGAATCAAGAGATAGCATGCTCAGAACTTACAACCAAAGCTGATGATGCTAGGTGCACCAAAAAGTGCAACaagAAACGCTCGTGTGGAAGACACAAGTGCCTTCAGCTCTGCTGCATTGATTTGGATCACATCTGCCCCTTGATTTGTAACCACAATCTCAGTTGTGGTCTTCATAAATGTGAAGAGCCATGTCACCGTGGAAATTGCCCTCAATGCTGGCGAGCAAgtTTTGAAGAGCTTCATTGTGAATGTGGAGCAAGTGTGATGTTTCCTCCCATTCCATGCGGAGCACGTCCTCCAGAATGCACCAAACTCTGCTCTCGCGAGCATCCCTGTGGTCATGTTCCTAATCATACATGTCATAGTCTGCCAGAATGTCCTCCTTGCACAGCTCTCACTGAACGTTATTGTCATGGAAACCATGAGCTCAGGAAAAATGTGCCTTGTCATCAGACCGAAATCTCATGTGGACGTCCCTGTGGGAAAGATCTTCCTTGTGGACGCCACAAATGCATCCTGCTCTGTCATAAGGGTTCTTGCACTGCGGTGCCATCATCACCGTTATCTGGTCCATCTGCACAGTGGGTGTGCAAGCAACCTTGTACTGCTCCTCGTTCCTTGTGTGGGCATCCATGTAATGCAGCCTGCCATGATGGACCTTGTCCAGACACTCCATGTAGAGAAATGgTTAAAGTAACTTGCACATGTGGCCATCGTTCCACTACTCGTGCTTGCTCTGAAAATAATACCGAATACCAGCAGATGGCTGTGGCATTGCTTGCTTCCAAGATGGTCGATATGCAGATGGGACATTCCGTTGATTTAAGGGATTTGGCTGGAGGTACATCTGGCCGTAAAGACAGCCTTAAAACGCTGGAATGTAACGATGAATGCAAATTGATTGAAAGAAACAGGAGATTGGCATTAATCTTGCAGATTCGTAATCCAGATCTTTCTGGTAAAATCATACCTCGCTACTCAGATTTCATGAAAGGGTGGGCTAAGAAAGATGCACCATTTGTTCAAATGGTTCATGATCGTCTTACAGAGCTAGTGCAACTAGCCAAACAGTCCAAGCAAAAAAGCCGTAGCCACATGTTCCCAGTAATGGGACTTGCAAAAAGACAGTTTGTTCATGAATACTGTGAACATTTTGGCTGTGAAGCACAGTCTTATGATGAGGAGCCAAATAGAAGCGTAGTTGCTACTGCCCTCAGAGATAAGTCATGGTTGCCCAGTTTGAGTTtgttggaaataataaaaagagaagCTGGTTCCAGAAAGGTTCCTGTTCCCCAACTGGCTCGTCCTTCATCTCTAGCTGTAACTGCTAAGCCTTCAAGCTCTTCAAACTTCTCCCCTCTCAGTAATTCCACATCATCTTCAAGAACTGAGAGAGAGAAGACCACTGTTCTTGGTGACTCCAGTTCTTCATCCAATACTCAAGTTGCTACCACAAGTTCAGGTGCAACTCAACCAGCTGTCACTGATGCTACAAATTCAGCATCAAAGTCTCCAGTAATAGATTATTTTGATTACACTGaaATTTCGAATGACATTGACATGCATATGATGGAAAATGATTCCGTCATGGATATTCTGGAAAAAGACGTTTCAAATATGACAGATGTGTCAGACATGGATACTGCTGCTATTGAAACCATGATCATGACAATggataaagaagtaaaatgtcTTGGATTTCCAAGAAAGCTTTTTAAGGTTATTGGTGGTGTATTTAAGCCTTTGTCAGAAGAAAAAGTGGATGTTCAGTTTTTTCTTACTACAAGaaaagttCGAGAGTGGCAGCAAATTCCAACTGAACCCAGTATATCGTTTGAGGGTCTTGATTTTGACCCAAACCGTTTAAGGACAATATTCATAGTTCATGGATTTATGAGTCGAGCAAAGACTGCTGGATGGGTTGAGGACATGGCTAATGCACTACTAGGATGGAGTGATGTAAATGTGATCATTGTGGATTGGCATTCAAGCTGGAGATATTGGCGAGCTGTTGGAAATACAAGGATTGTGGGAAAGGCTATGACTGAATTAGGGTTTTACTTAATGGGAGTGATGAAATTTGACACAATGAGGTTACACTTGATTGGACACAGCCTAGGAGCACATATAGTTTCATTCATGGCTGCTGCTCTTGGTGGAGTGGCTAGAATTACTGGTTTAGATCCAGCAGGTCCCTGTTTTCAAGGTGAAGGTAGTGAACATAAACTTGATGTCACAGATGCCAAATTTGTGGATGTCATTCATACCAATGGCCGTTTTATGCAAGCAATAGGTTTTGGTCAAGATAAGCCAATAGGCCACGTTGACTTTTATCCTAATGGGGGAGTTATACAGCCAGGATGCAGcaaaaaattccctttttctCGTTTCATCAATGTATATTCAAAATTGAGAAGAGCCATTTGCAGCCATGGCAGAGCACACCAGTTCTTTATAGAAGGAATAAGATTCAATTGCACATTTTGGGGCCATCTTTGGGACAGAAGTCAAGGAGATAGGTATGCTGCAGCATTAGAAATCCCCTTGGTCCCCTTTGGACTATGGACATATTACCATTATACTTATTGA
Protein Sequence
MDNWNNSYPYCGDPMEFFSMYELQQRMGALQCTPQMGYNHMPAVSPAPIATGPVQPTSLEYVERTLMAQNHPPVAMSYENSNPVFLPETNSSDGFPTALSVGSDSNIPTYLPPAEWLGLQPVSDAHNPPAPPPQRSRRPANVSTRIRTGNRTPSGRVFGGSGRNNPQWSSNDSTHPNQEYAEPQPRAENIDTYGASERPAHFSDSSRGFRGSNRRKNGGTWTRGNRGSSRGASSGRNEPFSYSSNSQNGRDERNRERRRLLEETAAFLNASQSEGGANSREKVNEPPENPRNRQDNRRNRQNNRRQPQMENEPTPAEGEGNPRKVREDEKAGEGRNRKEDQRNIVENGKTQYEGRRNHDNPRFKNDGWRNQNDVGRKATGDTSFGYGGGRDWRNYNQGPRSNISGERKKDSDSWRSRRERDQDMRDKKRENGQTLSEENKTTDTRENEASRREKLEDQLRRGNYECMVCCDLVRQRDSIWSCGSCFHVFHLKCIKQWARTSRSDDNGWRCPACQTVRESVPYDCLCFCGKVKDPEWNRRDTPHSCGEVCGKSHEVPAHCMHTCTLLCHPGPCPPCTAMVTRNCECNKTSQVVICGRSQALLCGATCEKVLNCGMHKCSKLCHEGPCGDCEVIVKQVCHCGKNERSIVCDSTSAGVEFYACESQCGHTLDCGNHKCEALCHPGDCIPCSLNPKLITKCPCGKADLSSIEGATERMSCLDPIPTCGKVCEKVLSCGQPGKHHLCKSECHEGPCPPCPLTTAVRCRCGNMNQEIACSELTTKADDARCTKKCNKKRSCGRHKCLQLCCIDLDHICPLICNHNLSCGLHKCEEPCHRGNCPQCWRASFEELHCECGASVMFPPIPCGARPPECTKLCSREHPCGHVPNHTCHSLPECPPCTALTERYCHGNHELRKNVPCHQTEISCGRPCGKDLPCGRHKCILLCHKGSCTAVPSSPLSGPSAQWVCKQPCTAPRSLCGHPCNAACHDGPCPDTPCREMVKVTCTCGHRSTTRACSENNTEYQQMAVALLASKMVDMQMGHSVDLRDLAGGTSGRKDSLKTLECNDECKLIERNRRLALILQIRNPDLSGKIIPRYSDFMKGWAKKDAPFVQMVHDRLTELVQLAKQSKQKSRSHMFPVMGLAKRQFVHEYCEHFGCEAQSYDEEPNRSVVATALRDKSWLPSLSLLEIIKREAGSRKVPVPQLARPSSLAVTAKPSSSSNFSPLSNSTSSSRTEREKTTVLGDSSSSSNTQVATTSSGATQPAVTDATNSASKSPVIDYFDYTEISNDIDMHMMENDSVMDILEKDVSNMTDVSDMDTAAIETMIMTMDKEVKCLGFPRKLFKVIGGVFKPLSEEKVDVQFFLTTRKVREWQQIPTEPSISFEGLDFDPNRLRTIFIVHGFMSRAKTAGWVEDMANALLGWSDVNVIIVDWHSSWRYWRAVGNTRIVGKAMTELGFYLMGVMKFDTMRLHLIGHSLGAHIVSFMAAALGGVARITGLDPAGPCFQGEGSEHKLDVTDAKFVDVIHTNGRFMQAIGFGQDKPIGHVDFYPNGGVIQPGCSKKFPFSRFINVYSKLRRAICSHGRAHQFFIEGIRFNCTFWGHLWDRSQGDRYAAALEIPLVPFGLWTYYHYTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-