Basic Information

Insect: Pachydiplax longipennis
Gene Symbol: -
Assembly: GCA_036926295.1
Location: JAVFKF010000012.1:56519339-56531858[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.1 8.4e+02 3.0 3.0 2 23 3 24 2 24 0.91

2 19 0.066 27 7.7 0.7 1 23 36 58 36 59 0.95

3 19 9.7 3.9e+03 0.9 2.3 2 23 385 406 384 406 0.93

4 19 0.035 14 8.6 2.9 2 21 438 457 437 458 0.94

5 19 4.8 1.9e+03 1.8 0.4 2 23 815 836 814 836 0.89

6 19 2.1 8.4e+02 3.0 0.5 1 23 938 960 938 960 0.91

7 19 0.071 29 7.6 2.1 1 23 968 990 968 990 0.96

8 19 0.061 25 7.8 1.3 1 23 1026 1048 1026 1048 0.96

9 19 0.0058 2.3 11.0 6.2 1 23 1056 1078 1056 1078 0.99

10 19 4.9 2e+03 1.8 1.8 1 23 1133 1155 1133 1155 0.97

11 19 0.0038 1.5 11.6 1.3 1 23 1186 1208 1186 1208 0.97

12 19 0.007 2.8 10.8 0.6 1 23 1281 1303 1281 1303 0.95

13 19 0.019 7.8 9.4 0.4 1 23 1309 1331 1309 1331 0.98

14 19 0.93 3.8e+02 4.1 0.2 1 23 1409 1431 1409 1431 0.94

15 19 0.00081 0.33 13.7 0.3 1 23 1437 1459 1437 1459 0.98

16 19 0.0043 1.7 11.4 2.6 1 23 1548 1570 1548 1570 0.97

17 19 0.002 0.82 12.5 2.5 1 23 1576 1598 1576 1598 0.99

18 19 0.015 6.2 9.7 2.6 2 23 1695 1716 1694 1716 0.95

19 19 0.0012 0.5 13.1 0.3 1 23 1729 1751 1729 1751 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.1	8.4e+02	3.0	3.0	2	23	3	24	2	24	0.91
2	19	0.066	27	7.7	0.7	1	23	36	58	36	59	0.95
3	19	9.7	3.9e+03	0.9	2.3	2	23	385	406	384	406	0.93
4	19	0.035	14	8.6	2.9	2	21	438	457	437	458	0.94
5	19	4.8	1.9e+03	1.8	0.4	2	23	815	836	814	836	0.89
6	19	2.1	8.4e+02	3.0	0.5	1	23	938	960	938	960	0.91
7	19	0.071	29	7.6	2.1	1	23	968	990	968	990	0.96
8	19	0.061	25	7.8	1.3	1	23	1026	1048	1026	1048	0.96
9	19	0.0058	2.3	11.0	6.2	1	23	1056	1078	1056	1078	0.99
10	19	4.9	2e+03	1.8	1.8	1	23	1133	1155	1133	1155	0.97
11	19	0.0038	1.5	11.6	1.3	1	23	1186	1208	1186	1208	0.97
12	19	0.007	2.8	10.8	0.6	1	23	1281	1303	1281	1303	0.95
13	19	0.019	7.8	9.4	0.4	1	23	1309	1331	1309	1331	0.98
14	19	0.93	3.8e+02	4.1	0.2	1	23	1409	1431	1409	1431	0.94
15	19	0.00081	0.33	13.7	0.3	1	23	1437	1459	1437	1459	0.98
16	19	0.0043	1.7	11.4	2.6	1	23	1548	1570	1548	1570	0.97
17	19	0.002	0.82	12.5	2.5	1	23	1576	1598	1576	1598	0.99
18	19	0.015	6.2	9.7	2.6	2	23	1695	1716	1694	1716	0.95
19	19	0.0012	0.5	13.1	0.3	1	23	1729	1751	1729	1751	0.97

Sequence Information

Coding Sequence: ATGATCAAGTGTGAGCGATGCGATTTCCGGACGCCTTACAAATGGAACTTGGACCGCCACTGCAAGAACCACTCGAGCGATCCGTCAGCCACCAATCAAGGAGCGTTCAGATGTCCTCTATGCGACTTCTCGGCTGATATCAAGCAATCTCTGACGGTGCATGTTCAGAACCACCATCTTTCGCCAGAACAGGTTCAGGCAAGAGCAGCccgaagaagaaataaagtagGTGCGAGTGATTCAGCTGATGCTGAGGCAGCTTCTCTGTCTACAGGAGCTGCAATTGACAGTGAAGAGATGGAACTTCTACGAATGGAAAGAGAGGAGAATTACTTTCAGGGAGGAACCTATGACAGAATGACATCTGACAATGCTCAGTTATTGACTGCAAATGAAGATCAAAATAGAGTCCCCTCACCAGCGAAAGTTAAAGTGCCCCCACGAAAGATGAGGGGGCCAAGTGCTACTCAAGAGCAGAATGAAAGACACAACTTCCGAACAGACTTTATTCACCCAGATGATATTATCCAGAAAAATGGGAATGTTTATATAAAGAACCTAAAATGTAATTACTGCAACTTCAAAGCTGTTTGGGAAGGAGAGATGCTGCGCCATGAAAGCAAAGCACATGGAATTGAACATCCAAAGCCAATGCCAAAAAATGCCCCTAATGCAGCAGGAAAGAGGTGCCCTCGTCCTGTGCCAAACCTTATTCCCATTCAAGGCAAGGGTATCCCTCCTGTGGTACCAGCACCAGTAGGTTCCTCATCTTTGCCTATACTCAGAATTCCCAATCTTAAATGCAGATCTTCTGGTGAGGAGCCTCCAAGGTCAGATGTTGAGGTCACTATGAGTGACAAAGACATGAATGCCCTCATAAATGCAGAGACTGCTCGAAACAGTGCATTAAAGGATTTTGCCTCCCTGATTGGTGACCTGCCAGATTCAGAATCTACCTCTAGACCCACCACTCCAAAGAATTCTATTCCAAGTACCGGAGGTGAGTTAGGGGAGACAACCCCAGTGGTCGATACTCTGGCTCCAGAAACATCGACCACAAGCATCTCACCATCAACTCCTGGGAAGAAGGCAGGTGCCTCCTTCTTTGACCGTTTAAAGGAAAGGTTGCTAGTCAGTGCAGGTGATGGTCTAGTCTGTGAGATCTGTGGTCATGAATCAAAGTGCCTTTCGGAGAAGGCTCGCCACCAAAAGCTGCATGATGCAACTCCTGAAGGGACAAATTTGGAAGATAATGGGGAAAAGAAAATCAGAGTGGGTGCAGGAAATGCTCTTGTCGGACTCTCCTCCACAAGGTGTCAGCACTGTCGGCAGAGGTGCAAGACTAGTGCTGATCTCATGGTTCATTTACAGTCATGTTTGAACTCCTTGAAGGATGAGGAAGGTGGTGGTGTTGGAGAGGAAGAAGAAGGTGAGGGGAAGGAAGAGGAAGATATGAAGGGAGAAGAAGAATGCAAAGAAGATGAGGATGGGAAAGGAGATGATGGGAAGGATGAAGAggatgaggaagaagaagagcCACACCCTATGGAGAACAAGGTGTTTGTATGGAACAACTGTGCACAGCCTGGAGAAGGAGGGGAAGGTGGAGGGCAGTCTGCACATCCTCAAAATTCCTCAGCTTCTGATGGAGAGGGTCTGCAGAGTGGGGAAGATGGTGGAGGTGGTTACCTGGATGATGGGGAAGGACTGGTGGGAGTAGAAACTGCTCCTGGTATTGGAGCTATCACCGGCCGCTCAGAGGCTGATTTGGCTGCTTCCGGTCATTCAAGCAAAGTTACCTTAAAGAAGGTCTTCAAGTGTCCTCAATGTTCCTTCTGGGCCACAACTGCTTCCAGATTCCATGTACATGCTGTTGGTCACCTCAATCGCAAGCCTTTTGAATGTTCTGCCTGTGGTTATCGCTCCAACTGGCGTTGGGATATCACAAAGCACATTCGTCTTCGTGCTGCATGGGATGAAGCACATAGGTCACCTCCAGGAGGTGGAGAAGGTGGAGGACCTCGTGTTCTCATGACAGATGAAACTGGGCGACGCAATTACTCCAAATACAATCGTCATTTGACTTTAGTGAGAGTTCATGAAATGATTGGTGGTGAATCTGGAGCTGGTGAGGGAAATCAGCCACCATCTCCCCAGTTGCCTCTTGAGGGTCATAAAACACCAAAATCAATGATGGCCCATCTGCCAGCACCTCCTCGCCTTACTCCAGCACCAGTGCAATCTTCAAGTATGGCTGATGATCCAGAATCTAGTCCTCCACCTCTTCTGCGTCCTCCACCACCATTGAGGGCGGCAGCTGTAGCAACTGGGAACAGAATAGGTCAACTAAGGGAAGAGGGTGAGGAGGGCAAGGGTCTAAAGAGGCCTGCTCCCCAAGGAAGTAGTGAAGGGGAGACAAAACCAGCCAAGAGGACTCTGTGGAAATGCAAGAAGTGCAACTACAGGGATGCTAGTAGAGAGCTGATCTTGGCTCATGTGAGGCAGCATTATGCTGCACAGCAACATCCTACGTCGCAGCCAATGCCTAGTCATATGAACTCacataattctgaaaaattagatAAGAAGATGGGTGGAGACGGTCCTTTGGAGGTGATTGGGAATGAAAACTGTATGGGAATAAAAGGTGGTGAAACAAAACCCTTTGGATGTGGACACTGTGGAAGGATATCAAATTGGAAGCATGTAATCCAGAGACACTGTCGATTGAAACATGGAGGAGACATACTTGTAATAGAGCAACCCTCAATTGACGGTGATCTATCAAATAATGACATGTCTGAATCTCCTTTCAAATGTGACAAGTGTCCTTTCATGGCAAAGGGTGAACTTGAATTGGAAAATCACTTTTCTTACCATTATCCAAGACCTGGAGCAGTTTTCAAGTGTTACTTCTGCCCTTTCTATGTGTTCCAGAAGAGGGATCTGCTTCTTCACATGCGGTTACATGCCCCTGATGGTAGTCCATCTAAGGCACCAGGGTCCTTGGATGGCAGTGATTCTGCAGATGGTGATCTCAAAGAAAAACAGGACAGTTCCGAAGGGGGAAAGAGGTATAGCTGTGTTGGCTGCCCGTATGTCAGCAATAGCAAGAGCCAATTCCTGTATCACAAGCAGTTTCACAGACCAAGAGGAGTGGCTCCCTTCAAATGTTCCTTCTGCTCATATAGTGTCTCTCGAAGGCACCTCCTTCATCAACACCTGCGTGTTCATGGTGTTTCCATTCCATCGGGCATGAAAGATGATGATTCGAAGTTAGACATCTCAAAGCGACCTCGCCCTACTTCTCGTCCAACTCAGCAAGTTTTGGACACCAGTCGGCTCACCGATGTACCTTTGGTTTGGGTTTCCCGTGCTGGCAAGTTCCACAAGATGTTCAAGTGTCGCTTTTGCCCTCATGTCAACGTTCGGAAGATCAACATTCAGGAGCATGAAAAAATGCACAAGCAGCGTAGAGTATCTCCAAGTAGCATTCATCAATCTGGAATGGGAGATGGCTCTCCAGGAAGTGGTCCTGGCTCAGGAGCAGGTCCTCACAAATGTCCCCAGTGTAATTATAGCTGTAACAATGCAGGAGTGCTATCTGCTCATGCCAAAGTGCATCTTGAATCATATGGAAAGGTGCATTGTCTTGTGGACACCAATAGAGCTGATGAGGAGCAAATAGCTGAGCTGGAGGCAGGCTCTACATCTCTATGTCAAGAACCAATGGACTCAGACAGTGGAGGTATGAGTGCCGAAGAAGATGTATCGGAAAGAGTGTCAGAAGTTGCTGAGGTATCGGATACCAATGCAGATACTTCTGATGGACGTGTCTTACATTTCTGCCCTATTTGTCCAGCGCGATTTGTCTTTGAACGTGAACTAGTTATCCATCGTCGTTTCCATGGAATCCGTCTCCCTTTCAAATGCGAAGCATGTTCCTATGCAGCTAGGCAGCGACCTCATCTCCTTGCCCATCTGAAAGTACACACGCGGGACTATCAGGAGAAGAGTGCCACTCTTGCAGCCACTCATACTGTTTCTATGCATCACCCCAAACCTCACACTGCCCCAATGTCTTCCAATGATCCTCTTCACCCTGAACCAATGTGGGTGGTTGTTCCAGAATCTCAGTCACCTCGACCCACTCAGGAGAATACTGTAGAGATGCCCTCACCTTCAGTTGGAAGCCCTCCTTCTGTTCCTCAGCCTAACAAACACTATGCCTGTGATCGATGCCCTGCAAGATTTTTCAAGGGTGTTGCCCTTCAGTATCACTTGACCCTTCATGGTGGACCAGGACCCTATCGCTGTAGAACCTGTGACTATGCTGTCAAAACCTATGGTAATTTAGTAAGGCATGAAATGATTCATGGTACTGTGGAGACGCCTACTTCTACCAATACAACTACTGTTCACAGTTCTCCCACAGTCATTCCTTTGTCAGGGACTGAATTGTTCCGCCAGAGGGAGGCAGCTGGGAGGATTGAGAACTCTCTCCCTTCAACCCCCCCTTCAGTTAACACCTCACCTGCAGTTCCTCCTAGTGTTGACCCACAGTTTGGAACGCTGATGCATGGAAATCCTGATTTCATATACCCAACCTATTTCAAAAATGgtaaacttaaagaaaaacgTTACAAGTGCCACAAGTGCCCATCAGCTTTTGAAAAAAGAGAGCAGTACAAAGTTCACCTTTCCCTTCATGGGTCTAAACAAAGGTATCGCTGTGATAAGTGTGATTATGCTGTGAAATACTGTGCCAACTACATTCAGCATGTGAGGAAGCATACACGTTGTGAGGAGGCTCAGCTTGCTCGGCAGCAGCAATTTGCATCTGCCAACGGTGCAGCCCCTGTCACAGTGTCAGAAGCATCCCCTGCACCAGTTGTGATGGTTGCCACTCCACCAACTACAACGCAATCTTCACCATCTCGGCCTGTGAAGAGCATCACACCCGCTGCTCCTCCAACATTGTCAACTGCTGAGAAGCAGCAGGCATTGCTCCAACGGCTGCGCCAAGAAGCTGCTGGTGCACAGGAGAGGGAAGAAGAAGAACGCAGGAAgaggaatgtttttctttgcaTGCGATGCCCATACAGCACCCATCGGAAAGATTCTTTGGAGGCTCACACCAGGCGCCATCCAGGTGCAACAGAGGCAAGTGTGGCTCCTGGTCCATTCCCCTGTCCTTATTGTGACTATGCTGCTCCTCAGTCACATTTCCTTAGAGAGCACATAAAGTTGCATTTCAAAGCTACAAGGACACTACCAAAGCCAGAGGCATATGTGTGCATTGAGAGAATGGAGTTGTGGGAAGGAGAGAGTAAGGATGTTGGAAAGTTGGTATTTAAAGACTCTGGTTTGGATGGTTACCAGAGGTTCCTTCCTGTGCTTGACATCAATGAGGGGTCAGATGCAGAGGATATGGGAGATGAAGAGAAGACTTACGTAGACCCTGAATCAGGGGAAATGATTCAGGCATCTGAGTTACTGTGTGAAGATCTTCAGGGTAATGAAGATAGTAATGATGTGAAGGAAGAAGGGGACAAAATGGATTGGAGTAGACTTGATGCCATGGAAGAAGAGTCTAGTGAATTGAGAGATAGTGACGATGGTAATGCTAGGACACTTGAGTGCATATCTGGCAGTTAA
Protein Sequence: MIKCERCDFRTPYKWNLDRHCKNHSSDPSATNQGAFRCPLCDFSADIKQSLTVHVQNHHLSPEQVQARAARRRNKVGASDSADAEAASLSTGAAIDSEEMELLRMEREENYFQGGTYDRMTSDNAQLLTANEDQNRVPSPAKVKVPPRKMRGPSATQEQNERHNFRTDFIHPDDIIQKNGNVYIKNLKCNYCNFKAVWEGEMLRHESKAHGIEHPKPMPKNAPNAAGKRCPRPVPNLIPIQGKGIPPVVPAPVGSSSLPILRIPNLKCRSSGEEPPRSDVEVTMSDKDMNALINAETARNSALKDFASLIGDLPDSESTSRPTTPKNSIPSTGGELGETTPVVDTLAPETSTTSISPSTPGKKAGASFFDRLKERLLVSAGDGLVCEICGHESKCLSEKARHQKLHDATPEGTNLEDNGEKKIRVGAGNALVGLSSTRCQHCRQRCKTSADLMVHLQSCLNSLKDEEGGGVGEEEEGEGKEEEDMKGEEECKEDEDGKGDDGKDEEDEEEEEPHPMENKVFVWNNCAQPGEGGEGGGQSAHPQNSSASDGEGLQSGEDGGGGYLDDGEGLVGVETAPGIGAITGRSEADLAASGHSSKVTLKKVFKCPQCSFWATTASRFHVHAVGHLNRKPFECSACGYRSNWRWDITKHIRLRAAWDEAHRSPPGGGEGGGPRVLMTDETGRRNYSKYNRHLTLVRVHEMIGGESGAGEGNQPPSPQLPLEGHKTPKSMMAHLPAPPRLTPAPVQSSSMADDPESSPPPLLRPPPPLRAAAVATGNRIGQLREEGEEGKGLKRPAPQGSSEGETKPAKRTLWKCKKCNYRDASRELILAHVRQHYAAQQHPTSQPMPSHMNSHNSEKLDKKMGGDGPLEVIGNENCMGIKGGETKPFGCGHCGRISNWKHVIQRHCRLKHGGDILVIEQPSIDGDLSNNDMSESPFKCDKCPFMAKGELELENHFSYHYPRPGAVFKCYFCPFYVFQKRDLLLHMRLHAPDGSPSKAPGSLDGSDSADGDLKEKQDSSEGGKRYSCVGCPYVSNSKSQFLYHKQFHRPRGVAPFKCSFCSYSVSRRHLLHQHLRVHGVSIPSGMKDDDSKLDISKRPRPTSRPTQQVLDTSRLTDVPLVWVSRAGKFHKMFKCRFCPHVNVRKINIQEHEKMHKQRRVSPSSIHQSGMGDGSPGSGPGSGAGPHKCPQCNYSCNNAGVLSAHAKVHLESYGKVHCLVDTNRADEEQIAELEAGSTSLCQEPMDSDSGGMSAEEDVSERVSEVAEVSDTNADTSDGRVLHFCPICPARFVFERELVIHRRFHGIRLPFKCEACSYAARQRPHLLAHLKVHTRDYQEKSATLAATHTVSMHHPKPHTAPMSSNDPLHPEPMWVVVPESQSPRPTQENTVEMPSPSVGSPPSVPQPNKHYACDRCPARFFKGVALQYHLTLHGGPGPYRCRTCDYAVKTYGNLVRHEMIHGTVETPTSTNTTTVHSSPTVIPLSGTELFRQREAAGRIENSLPSTPPSVNTSPAVPPSVDPQFGTLMHGNPDFIYPTYFKNGKLKEKRYKCHKCPSAFEKREQYKVHLSLHGSKQRYRCDKCDYAVKYCANYIQHVRKHTRCEEAQLARQQQFASANGAAPVTVSEASPAPVVMVATPPTTTQSSPSRPVKSITPAAPPTLSTAEKQQALLQRLRQEAAGAQEREEEERRKRNVFLCMRCPYSTHRKDSLEAHTRRHPGATEASVAPGPFPCPYCDYAAPQSHFLREHIKLHFKATRTLPKPEAYVCIERMELWEGESKDVGKLVFKDSGLDGYQRFLPVLDINEGSDAEDMGDEEKTYVDPESGEMIQASELLCEDLQGNEDSNDVKEEGDKMDWSRLDAMEEESSELRDSDDGNARTLECISGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -