Basic Information

Insect: Pachydiplax longipennis
Gene Symbol: -
Assembly: GCA_036926295.1
Location: JAVFKF010000012.1:44007853-44019813[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 5.4 2.2e+03 1.7 0.2 1 23 176 199 176 199 0.71

2 21 2.2 9e+02 2.9 2.8 1 23 202 225 202 225 0.85

3 21 0.16 65 6.5 0.0 2 23 229 251 229 251 0.92

4 21 5.8 2.4e+03 1.6 0.5 2 23 255 277 254 277 0.93

5 21 9.1 3.7e+03 1.0 2.0 1 22 324 344 324 346 0.80

6 21 4.7 1.9e+03 1.9 1.2 3 19 454 470 453 473 0.91

7 21 0.051 21 8.1 0.0 2 23 707 729 706 729 0.93

8 21 0.22 90 6.0 1.7 1 23 782 805 782 805 0.96

9 21 0.29 1.2e+02 5.7 0.4 1 23 817 840 817 840 0.97

10 21 0.052 21 8.0 0.9 1 23 846 869 846 869 0.96

11 21 0.83 3.3e+02 4.2 0.2 2 23 876 898 876 898 0.93

12 21 0.0014 0.56 13.0 1.9 1 23 906 929 906 929 0.97

13 21 0.00012 0.048 16.3 0.6 1 23 935 957 935 957 0.96

14 21 6.9e-06 0.0028 20.2 1.9 2 23 964 985 963 985 0.97

15 21 6.2e-08 2.5e-05 26.7 2.5 1 23 990 1012 990 1012 0.98

16 21 9e-05 0.036 16.7 4.9 1 23 1018 1040 1018 1040 0.99

17 21 1.5e-05 0.0059 19.2 4.8 2 23 1047 1068 1046 1068 0.96

18 21 9.3e-06 0.0037 19.8 0.2 3 23 1076 1096 1074 1096 0.94

19 21 2.1e-05 0.0085 18.7 0.2 3 23 1104 1125 1103 1125 0.96

20 21 4.4e-07 0.00018 24.0 0.3 1 23 1131 1153 1131 1153 0.98

21 21 0.0016 0.64 12.8 1.9 2 23 1160 1182 1159 1183 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	5.4	2.2e+03	1.7	0.2	1	23	176	199	176	199	0.71
2	21	2.2	9e+02	2.9	2.8	1	23	202	225	202	225	0.85
3	21	0.16	65	6.5	0.0	2	23	229	251	229	251	0.92
4	21	5.8	2.4e+03	1.6	0.5	2	23	255	277	254	277	0.93
5	21	9.1	3.7e+03	1.0	2.0	1	22	324	344	324	346	0.80
6	21	4.7	1.9e+03	1.9	1.2	3	19	454	470	453	473	0.91
7	21	0.051	21	8.1	0.0	2	23	707	729	706	729	0.93
8	21	0.22	90	6.0	1.7	1	23	782	805	782	805	0.96
9	21	0.29	1.2e+02	5.7	0.4	1	23	817	840	817	840	0.97
10	21	0.052	21	8.0	0.9	1	23	846	869	846	869	0.96
11	21	0.83	3.3e+02	4.2	0.2	2	23	876	898	876	898	0.93
12	21	0.0014	0.56	13.0	1.9	1	23	906	929	906	929	0.97
13	21	0.00012	0.048	16.3	0.6	1	23	935	957	935	957	0.96
14	21	6.9e-06	0.0028	20.2	1.9	2	23	964	985	963	985	0.97
15	21	6.2e-08	2.5e-05	26.7	2.5	1	23	990	1012	990	1012	0.98
16	21	9e-05	0.036	16.7	4.9	1	23	1018	1040	1018	1040	0.99
17	21	1.5e-05	0.0059	19.2	4.8	2	23	1047	1068	1046	1068	0.96
18	21	9.3e-06	0.0037	19.8	0.2	3	23	1076	1096	1074	1096	0.94
19	21	2.1e-05	0.0085	18.7	0.2	3	23	1104	1125	1103	1125	0.96
20	21	4.4e-07	0.00018	24.0	0.3	1	23	1131	1153	1131	1153	0.98
21	21	0.0016	0.64	12.8	1.9	2	23	1160	1182	1159	1183	0.93

Sequence Information

Coding Sequence: atgaatgaaaatcttgAAGATGGTACAACTTCTGGGAAGTCCAGGAGACCGTGTGCCAATGTTCCCAGTGCATTGCTGCCAGAAACTCAAGCATTTGTACGGGAGACGCTTGGTATCGTGATGAAATCTGAAGAAGATTCTACTCATGAGCCCTGCTGCAAGGAGGAAAGTGATAGCCAAGATGAAAGTGTTGGTGTTGATTGCAGTTCTATTAGGAGGGGACAAGCGGCCATAGCTTCCCACTCTGCCGTGGGAATTCATGAAACTCAAATTTTTCAACATGAAAAGAAAACGGAAGAGGGTTTGTCAGTTATTGAGTGCGACGTCTGCCTTGGATCTGGGAGGGATCCGACTGGTAGGCCGTGTAGCTGTAGTATTCCTTCCACGTCTTTTCCTCCCCTCGATTCCATCATGGGCTTACAGCAGGTGGCCATTCAGTACatgcagcagcagcagcaacaACAACAGCCATCGTCATCTAAAAAGCGATTTACTACCTCTCCCTCTATTAACCAAACGCGCCCTCATGCCTGTCCAATTTGTGGCCAGTGGTTCTTAATGAGGGAAAAGCTTGTGCTCCACCAAGTAATGAATCATGGAATGCATCATTGTCGTCATTGTTCAGCCGTCTTTTCGACGGCAGATGAAGAAGAGGAACATCGGAAAGCGAATCATTTGCCACCTGTTTGCGAAACATGTAAGAGACCTTTTCTGAATGCAGTGGCCTTAGCGAGACACCTTTCCGCTGTCCATGATGTCTGCACTTGTCTTCTTTGTGGTGTCTTAGTCAGACCTCGGGCTTCTTACGCACTACACGTGCGTCGTAAACACTTTTGTGTCAGGGAAGATTATGACGATGAAACGGTTGGGGAGTGGGGATCACCAGAAGTTCCGTCGGAAATCGAAGGTGAAATAGAAGAAACGGCAGTTTTACCAAATTTAATCGAAGACGCAGATGGTGCATGGTCTTTCATGTGTCGACTCTGCGGTAAAGAGCGACGAAAGACGGACCTTTTTGGTCACTTTTTTTCTTATCATCGCCTCTCCTTACCATGTCTTGTCGACCTCTTGTGGCAGGAACTTGGTCGAGTTGTCATAGCAGGTGCTCCTCCGGCTCGAGCctcagaagaaaaagaagacgAAGAAGAATCCGATGTAATGCCACCGCCAATACAAGCACCACCAGTTACTCGCCATGTAAAATCTGCCTCCATTTGTGCCACCACCATCTTGGAAGAGCAGAATGTTGAAGAAAGTAAAACCTCTTGCATTGTCTGTGGATCATCTTATCCTACAGAAGGTGATGTAACAACAACACCCAAGGAGGCACACATGGTGTTTTGTTCTCAAAAACCTTTTTGCAGGGCATGTGGTTATACATGTCACACTGAGGATGATTTAGACAAGCATGCAGACTCAGGCTGTCCTCTGTCAACTGCATTATGGCCTGATCTTGGTGGGGTGCCTTGTCCTTTCTGTAGAGCCCCTGTCTCTGGTGGTGCTAGTGAATATGAGACGCACATGGTAACTGAGCATGGTTGGCAGCGAGCAAACAATGCAGACCCTCCTATTGTTTGCGACGACCTTCTTAGACCAGGACCTCCAGTTACATGTACCCTTTGTGGAGAGCAAAGTGGAGTTACTCTGGCAGGAGATGTACATTCCCTGTTTGAACATCTTCAGAATCACAGTCTTACTCTTGGCCCTTCACTCTTTACTCTCTCTGCCATTTCATCTGCACTGGAAAGACTGGCTGACCCAGATGTTCCTGATCTAACCTTAGATGGGGAAGATTTGGGCCTTGGTGATAAGGGGGAAGAAGGTAACTACGATTCCAGTGAAGAGGGAGGTTCATCGATAGACTTTGAAGATATGGAGAGTTATGTTGGAGGAATGGATTTCTCAGGTATGGATGCATGTGAGGATGAGGATGATGACATAGTTCCTCCGAATGCTCTGGATACAGATTTGGGGGAAGCAGATGTGGATCCTCATGATGTTGAGTTAGTGGTAGGAGATGCAAGTAGTGGTGATGAAGAGGAATCTACAGAGTCAGAAGAAGCAACGGTGAAGGAAGAAGGAGAACCTAGGAAGAAGGAAGGAGCTTTAGAGCCCCTTGAATGTGAGCTTTGTCCCAGACAGTTTGATTCAGGTGATGAGTATCGTCTCCATCTTCAAGCAGTACATCGCCTGACATTTGGTGGAATGGACGATCCAAAGGTCAAAGAAGAGCAGAAAGTGAGACCAGCTTGTGCTTGTAGATTCTGTTCTCTCCAATTCCAGAGCAGATGGGAGCGCAGTGGGCATGAGGTTGGAGTCCATCCAGAGGAACGAGATTTTTTCTTTAGGTGCTATGCTTGTGAAGACACTTTCTCAAGTAGGGTATGTGTGCGACGGCACATGGAGTCAGCCCATCCAGATGAATTGCCCTATGACAAAAGAATGGGTTTTAAGTGTCGGCGATGTCTTGTTCTCTTTCCTCGGCTGGGTGCTCTAAAAGATCACTCTAGAGTTAAACATCCAGGTGCAATAGTGTACAACTGTCGCTTCTGTCCCTCTGTTTTAAAGACTAGGAAAACACTAAGGCAACATGCCAAGGTTGTTCACTCTGAATCACGGCGTCGAGAATGTTCACTGTGTGGTAAAGTTCTTTGGAGCAAGCGTGCTTATGGAATCCATTATCGGATGAAACATAGCAAGACTACTAAAGTTGGCTTTAGATGTAGAATTTGCCAGAAGAGGTTTGATTCCAAAGATGAAAGAAAGCTGCATTACCAAATTGATCATGAAAATGAAAGCCCTTACCACTGTCCAGATTGTGGTAAGGGTTTTGCATCTAAATCAGGGATGTATGGCCACAGGCAGCTTCACACTGGTACTGGAATATCTCGTTGTGAACACTGTGGAAAAGAATTCACGaggAAGGACAGTTACAATGAGCACCTTTTGATACACAATGGTCCTCGCCACAAGTGCCCTCATTGTCCAAAAGAATTTGTTCAGCGCTCTAACCTTGTCCGTCATATTCGAATACATACAGGTGAAAAACCTTACAAATGTACTCACTGTGACAAAAGGTTCTCAGACAAAGGTGCCTGCAATTCTCACATTCGAGTCCACACTCGTGAAGAGACATGCAGCTGTCCTTATTGTGGTCAGACCTTTTCCAAGAAACAGaaattgaaGTATCATATAAGAAAACATACCGGAGAAGGATTGATCAATTGTGAGATATGTGGGAAGTCGTTCACAAACAGCTTTGCCCTGAAAGAGCACAGAGTGATCCACAACCGCCAAACTCAGATTCTCTGCCCTCAGTGTGGAAAAGGTTTCAACAGTGAGAAGTACCTCCAGCGCCACATCACCATTGTCCACGAGCCGTCCAACGCATTTCCCTGTCCCCTGTGCGAGAAGGTGTTCTCCCAACAATCCCGCTTGCGAGCACACCTCATGACGCACACAGGATTGAAGCACATGCGCTGCTTGCTGTGTGACAAGGCATACTCCGTGCGCAAGTCTCTGAGGCGACACCTGCTAGAGAAGCATCACATCTCACCGGAGCATCCCCACTACAAGCGCTGCTTCCACGCCATGTCTCCAGAAGAGGCGGGTCTGCCACTCCTTGCTGCAGCAAGAGCTCTGGCGCTGGGTGCAGCCGCAGCAGCTGCCCATGCTGCTGCTACTGGGGGAGAGGATGCATCGGTTGGTGACTCGGAGCCAAAGACGGGtcaggaagaggaagaagatgacGACgatgaggaggaagaggaagatgagGAGAGTGATGGTAGTCAGGATGTGGAAGGGAATCCATCCCAGCCATGGCCCGTGGATATGACATGGGCATCTGGGAGGGATGCACCAGTAGCTGTGGGGCAGACAGCAAGGAGGGCGAGAGGTCGATTTGGGGGACAGAGGGGAGAAACCTCTAGGGGAAGATCACAGAGGTCTCCTGGTAGACCAAGAGGGTCTAGAGGGAGCACTGTAAGCAGGGGTGTCATTGGAGAGGGTCCAAGTGCCCCGAGGAGACGGGGTAGCACTACGGGTAAGAAGCGACGGGTTGAAGCGATTGCTGAAAGCTTGATGCAAAACACAAAAGGGATGCTCTTGTCATTGGGGGAGGAGAGTGGGGAGGCTGGGGGATCACAAGGCATGATGGGTGGGGACATGGGATTTAATATTGCTGGTTGTAGTGGGGAAAGGAGGGACATCCCAGAAGTGTTGAGCATAAAGCAGGAGTCACCAGTAGATGAAGAATCACTAGTAGGGAACAATGGtgtggagagaaagaaaggaagtagAAAGGCTCAGGTGAGTGAATTGGGTGCACATTGGTTGGCTGGCGAATGA
Protein Sequence: MNENLEDGTTSGKSRRPCANVPSALLPETQAFVRETLGIVMKSEEDSTHEPCCKEESDSQDESVGVDCSSIRRGQAAIASHSAVGIHETQIFQHEKKTEEGLSVIECDVCLGSGRDPTGRPCSCSIPSTSFPPLDSIMGLQQVAIQYMQQQQQQQQPSSSKKRFTTSPSINQTRPHACPICGQWFLMREKLVLHQVMNHGMHHCRHCSAVFSTADEEEEHRKANHLPPVCETCKRPFLNAVALARHLSAVHDVCTCLLCGVLVRPRASYALHVRRKHFCVREDYDDETVGEWGSPEVPSEIEGEIEETAVLPNLIEDADGAWSFMCRLCGKERRKTDLFGHFFSYHRLSLPCLVDLLWQELGRVVIAGAPPARASEEKEDEEESDVMPPPIQAPPVTRHVKSASICATTILEEQNVEESKTSCIVCGSSYPTEGDVTTTPKEAHMVFCSQKPFCRACGYTCHTEDDLDKHADSGCPLSTALWPDLGGVPCPFCRAPVSGGASEYETHMVTEHGWQRANNADPPIVCDDLLRPGPPVTCTLCGEQSGVTLAGDVHSLFEHLQNHSLTLGPSLFTLSAISSALERLADPDVPDLTLDGEDLGLGDKGEEGNYDSSEEGGSSIDFEDMESYVGGMDFSGMDACEDEDDDIVPPNALDTDLGEADVDPHDVELVVGDASSGDEEESTESEEATVKEEGEPRKKEGALEPLECELCPRQFDSGDEYRLHLQAVHRLTFGGMDDPKVKEEQKVRPACACRFCSLQFQSRWERSGHEVGVHPEERDFFFRCYACEDTFSSRVCVRRHMESAHPDELPYDKRMGFKCRRCLVLFPRLGALKDHSRVKHPGAIVYNCRFCPSVLKTRKTLRQHAKVVHSESRRRECSLCGKVLWSKRAYGIHYRMKHSKTTKVGFRCRICQKRFDSKDERKLHYQIDHENESPYHCPDCGKGFASKSGMYGHRQLHTGTGISRCEHCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYKCTHCDKRFSDKGACNSHIRVHTREETCSCPYCGQTFSKKQKLKYHIRKHTGEGLINCEICGKSFTNSFALKEHRVIHNRQTQILCPQCGKGFNSEKYLQRHITIVHEPSNAFPCPLCEKVFSQQSRLRAHLMTHTGLKHMRCLLCDKAYSVRKSLRRHLLEKHHISPEHPHYKRCFHAMSPEEAGLPLLAAARALALGAAAAAAHAAATGGEDASVGDSEPKTGQEEEEDDDDEEEEEDEESDGSQDVEGNPSQPWPVDMTWASGRDAPVAVGQTARRARGRFGGQRGETSRGRSQRSPGRPRGSRGSTVSRGVIGEGPSAPRRRGSTTGKKRRVEAIAESLMQNTKGMLLSLGEESGEAGGSQGMMGGDMGFNIAGCSGERRDIPEVLSIKQESPVDEESLVGNNGVERKKGSRKAQVSELGAHWLAGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385066;
90% Identity: iTF_01385066;
80% Identity: -