Basic Information

Insect: Pachydiplax longipennis
Gene Symbol: -
Assembly: GCA_036926295.1
Location: JAVFKF010000017.1:5823043-5836681[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0026 1.1 12.1 2.4 1 23 303 325 303 325 0.95

2 13 0.00017 0.067 15.9 1.2 1 23 330 354 330 354 0.92

3 13 6.3e-05 0.025 17.2 0.5 1 23 383 406 383 406 0.95

4 13 9.1e-06 0.0037 19.9 0.3 1 23 412 434 412 434 0.96

5 13 0.0059 2.4 11.0 0.5 1 23 444 467 444 467 0.89

6 13 3.2e-07 0.00013 24.4 2.7 1 23 473 495 473 495 0.98

7 13 0.00011 0.046 16.4 0.2 1 23 501 523 501 523 0.92

8 13 0.00012 0.049 16.3 2.3 1 23 529 551 529 551 0.97

9 13 9e-07 0.00036 23.0 1.9 1 23 557 579 557 579 0.98

10 13 7.4e-06 0.003 20.1 6.3 1 23 585 607 585 607 0.97

11 13 2.5 1e+03 2.7 6.3 2 23 614 635 613 635 0.96

12 13 8.6e-05 0.035 16.8 1.9 1 23 641 663 641 663 0.98

13 13 4.6e-07 0.00019 23.9 2.2 1 23 669 691 669 691 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0026	1.1	12.1	2.4	1	23	303	325	303	325	0.95
2	13	0.00017	0.067	15.9	1.2	1	23	330	354	330	354	0.92
3	13	6.3e-05	0.025	17.2	0.5	1	23	383	406	383	406	0.95
4	13	9.1e-06	0.0037	19.9	0.3	1	23	412	434	412	434	0.96
5	13	0.0059	2.4	11.0	0.5	1	23	444	467	444	467	0.89
6	13	3.2e-07	0.00013	24.4	2.7	1	23	473	495	473	495	0.98
7	13	0.00011	0.046	16.4	0.2	1	23	501	523	501	523	0.92
8	13	0.00012	0.049	16.3	2.3	1	23	529	551	529	551	0.97
9	13	9e-07	0.00036	23.0	1.9	1	23	557	579	557	579	0.98
10	13	7.4e-06	0.003	20.1	6.3	1	23	585	607	585	607	0.97
11	13	2.5	1e+03	2.7	6.3	2	23	614	635	613	635	0.96
12	13	8.6e-05	0.035	16.8	1.9	1	23	641	663	641	663	0.98
13	13	4.6e-07	0.00019	23.9	2.2	1	23	669	691	669	691	0.98

Sequence Information

Coding Sequence: ATGGGTGGATATTTATACGATTCATCTTATTGTCGATTATGTGCCGAAGATAATCCTAGCGGCGTTATACTTTATAAAGCAGATGATTTAGAACTTGATTTAAGCACACTAGTGAACCGATATTTACCTCTTAAGATTCAAGATGATGGGAAACTTCCGAGGACTATTTGCCCCGGCTGTAACATTCAACTACAGGCCACAGTTCAATTCTTTGAATTACTTGTGGAAggccagaaaaaaataagagaacttTGGAAATTACAGGTCGAAAGAGATAGAAAAGCTGAAAAGGAGCGGCTAAGACTGGAAAGAGTGAGAAGTGAACTGCAGTTGTCACTCGGTGATCTTGATAATCCCAATGCACAAATTTTCATCCAAATTCCAGGAGATGATGGCAGTGCAATGTTTGTGCCTGAGCATGAGATGGCTCTCAAAATGGAAGGATTGGAACGTCCTagaagaaaaagaggaaggCCACCAAAGCCTAAACCACCTCCAGAAGAAGTCCTTAGTAAAGATACTCTTGCAGAAGgAGAGGAAGTTGTTGGAGAAGATATTGGTGAAGGAAATACAGGTGATGGACAGCCAGATTCACCAAATCAAGTTGAGGAGGACATGGAAGAAGATGCAGATGGTAGAAGACGAAGGCGTCGTAAAGTACCACAAAGaTTTAAAGAAGCAGTCCAAGGAAAGGAATTGGAGAGGATATTCAAGGAAGAAGGTGTCATTGATGAGGATGAAGCAGAGGTGGAGGAAAAGGTGAATGTTGCTGAACAGGAGAGCCAAGAAGATGGAGAAATAATTGGTCATTTAGAAACTCAGGAAGGACATGATCTTGGAGAACTGATCATAGTGAGCAGGGGTAAAGGACGAGGAAGGCCACAGAGGCGCAGAAGAAAGGTTCGCTTTCAGTGTGATATTTGTGGAAAAGGCTTCCAGCATAAAGGCAGATATCTTGTTCATAGGAGTTTCCATAAAGGTGTCAAATTTGAATGTGCCACTTGCAATAAAAGATTCACTTTCAAGGAGAATCTTGACCTTCATCAGAAGTCCTCTGGTCACACTGGAGAAGGCATTGTGGAAGGTCTTGAAGATGGAAAGGATCCTGAGGAAGAGGATCCTTCTAGTTCTTCTGTAGAAACCAGATTTCCTTGCGACCAATGTGacaaaacttttcagaccaagCAAAGCTACGAGgTGCATTTGAAGGCAATTCATGAAGGGCAGAAACCATTTCAATGTGAAGTTTGTGGCAAAAAATTTGCCTACCAAAACAGCCTCAAAGGCCACATGGTTGCTCATGAGaccCAAAAGACTGATGGAAAAGGTTACCCTTGTGAGTTTTGTGGAAAGCTGTTCAATCATCCAAGCTCAGTGGTGTATCATAAAGAGGCTGAGCATAACAACGGCAGACGCTTTGTCTGTAACAAGTGTGGAAAGGCATTTAAGCATAAGCAACTACTTCAGCGTCATCAACTGGTACATTCTGAGCTGAGgcCATATATATGTAAAGCTTGTGGAGCTAGTTTCAAGACCAAAGCTAATTTGCTCAACCACCAACCAACTCATACTGGAGAAAAAAGATACTTCTGTGAATTGTGTGGTCAACAGTTTGCCCACAAAACAAGTCTTACACTTCACTACAGGTGGCATACAGGAGAGAAACCTTACCATTGCCAGTTCTGTGGGAAAGATTTCTCTCAGAATGGTAATCTGCAAGAACATTTGCGCATCCATACTGGAGAGAAACCATTTTGCTGTAGTTATTGTGGTAGAAAATTCACTACCTCATCTCAATTTAAACTGCACATCAAGCGGCATACTGGAGAACGGCCTTGGAAATGTGAATTCTGCCCTAAAACATTCTTACACAAGGATACATGGAAGTGCCATACAAGACGCCACAGGGGTGAACGTCCATATCAGTGTCACTTCTGTGCTAGAGGTTTCACAGAACAATGGGCATTGAAGAAACACTTGCGTCTCCACACAGGAGAGAAACCTTATTCTTGCAATTTGTGTGGTAAGGCTTTTGCAGACTGCTCTAACCTCACTAAACATAAAAAGGTTCACAGGGAGCATTTGCCTGCTGGTTCTTTGGATGCCACAGTATGGAATATGATTCGCTCTCAGATAGCTGGTGAAGGTGGAAGCAATGGTGCTGCAGGAGAAGCTGCAGAAGGTAGTGGTTTAGTTATGGAAGAAGGTGCAGCTGATGAGGAGCAAGGGATCCAGCGGATCATTTATGTCACCTATCAAGACCCTAATGATCCTGAAGCTAAGACATTGCATATAGTTGAAGGTGTGCCAGAAGCAATATCACAGGGCGACCACAAGGAGGGTATAACTGGAGTAGAGGAAGGTGGTGCTCCTCTGCATCTTCAGCAAGTGGTTGAGGCAGCAGTGGCTGGTGACGATGGGGAAGTAGGAGAGCAGTGTGATGTAATGCCAAAAGTGGACTCTGAGGTTGGAGGTGGTCACCACATTGCAGGAGGACTCTCAATGGTGGATGATGTTACCAGAGAGAGAGAACTGATGCAAAGTAAGACTGAGGAAGAGGACGATCTTGTCCATCAGCTTTCAAGCCAAAGTTCCATGCATCTTGCTGCATCGTCTGTAACTGCAGGCCCTCATCAAACATTACAAGTGATGGATGAAGAAGGAAACCCCATCCAGTTCACTATGCAGGATGGTCGGCATATACAGATAACAACAGGTGATGGTCAAAACCTTCATGTGACCACTCCTGATGGACAGACCATTCCTGTACAACTGACTACAGCTGAAGGACACCCAATTGCTCCTCAGCCAATTACTGGTACTGACTTAGAGCCAAGGGAAGAAGATGGTACTGAGACTGATCCTGTTACTGCCATGGTTGCAAGAATGCATGGGGAGGAGTTGTCTACCTCTGGTAGTCTGGTGAGGAGGACTCATGTTGCCCTCACAGATCTCATGGAGGGGGCAGCTGCTGATGTGGAGGATGTGGTGTCACGTGGTATGGTTGTGGTGCCTGAAGATAATCAGCATGATTTACCTCAAAGTGAAGTGGAGCAGGCTGGTCAGCCTCATCAACAAACTATAGAGTTCACTACGCAGGATGGACAACAAGTGAGGCTTGTTGCATCATATGAGGTGGACCCTCTCCAGTTGGCTGCAGAGTACTTGAGTGCTGCCACTCAGTGA
Protein Sequence: MGGYLYDSSYCRLCAEDNPSGVILYKADDLELDLSTLVNRYLPLKIQDDGKLPRTICPGCNIQLQATVQFFELLVEGQKKIRELWKLQVERDRKAEKERLRLERVRSELQLSLGDLDNPNAQIFIQIPGDDGSAMFVPEHEMALKMEGLERPRRKRGRPPKPKPPPEEVLSKDTLAEGEEVVGEDIGEGNTGDGQPDSPNQVEEDMEEDADGRRRRRRKVPQRFKEAVQGKELERIFKEEGVIDEDEAEVEEKVNVAEQESQEDGEIIGHLETQEGHDLGELIIVSRGKGRGRPQRRRRKVRFQCDICGKGFQHKGRYLVHRSFHKGVKFECATCNKRFTFKENLDLHQKSSGHTGEGIVEGLEDGKDPEEEDPSSSSVETRFPCDQCDKTFQTKQSYEVHLKAIHEGQKPFQCEVCGKKFAYQNSLKGHMVAHETQKTDGKGYPCEFCGKLFNHPSSVVYHKEAEHNNGRRFVCNKCGKAFKHKQLLQRHQLVHSELRPYICKACGASFKTKANLLNHQPTHTGEKRYFCELCGQQFAHKTSLTLHYRWHTGEKPYHCQFCGKDFSQNGNLQEHLRIHTGEKPFCCSYCGRKFTTSSQFKLHIKRHTGERPWKCEFCPKTFLHKDTWKCHTRRHRGERPYQCHFCARGFTEQWALKKHLRLHTGEKPYSCNLCGKAFADCSNLTKHKKVHREHLPAGSLDATVWNMIRSQIAGEGGSNGAAGEAAEGSGLVMEEGAADEEQGIQRIIYVTYQDPNDPEAKTLHIVEGVPEAISQGDHKEGITGVEEGGAPLHLQQVVEAAVAGDDGEVGEQCDVMPKVDSEVGGGHHIAGGLSMVDDVTRERELMQSKTEEEDDLVHQLSSQSSMHLAASSVTAGPHQTLQVMDEEGNPIQFTMQDGRHIQITTGDGQNLHVTTPDGQTIPVQLTTAEGHPIAPQPITGTDLEPREEDGTETDPVTAMVARMHGEELSTSGSLVRRTHVALTDLMEGAAADVEDVVSRGMVVVPEDNQHDLPQSEVEQAGQPHQQTIEFTTQDGQQVRLVASYEVDPLQLAAEYLSAATQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385053;
90% Identity: iTF_01385053;
80% Identity: -