Plon062539.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pachydiplax longipennis
Gene Symbol
ZFX
Assembly
GCA_036926295.1
Location
JAVFKF010000015.1:52582281-52585861[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 3.4e-06 0.0014 21.2 0.6 1 23 527 549 527 549 0.98
2 11 1.8e-06 0.00073 22.1 1.5 1 23 555 578 555 578 0.97
3 11 1e-06 0.00042 22.8 4.0 1 23 587 609 587 609 0.98
4 11 7.8e-06 0.0032 20.1 1.0 1 23 615 637 615 637 0.97
5 11 6.5e-07 0.00026 23.5 0.9 1 20 643 662 643 664 0.94
6 11 2.2e-06 0.00089 21.8 2.2 1 23 682 704 682 704 0.97
7 11 4.3e-06 0.0017 20.9 2.8 1 23 710 732 710 732 0.98
8 11 1.8e-06 0.00073 22.1 0.3 1 23 775 797 775 797 0.98
9 11 1.3e-06 0.00052 22.5 0.9 1 23 803 825 803 825 0.97
10 11 0.00066 0.27 14.0 1.5 1 23 831 851 831 851 0.97
11 11 9e-06 0.0036 19.9 2.4 1 23 857 879 857 880 0.96

Sequence Information

Coding Sequence
ATGGAGCAGCATAATAAAATTGGAATCAATTCAGATTCTCAGAtatgttttatgaatttaaGTCAGCAAACACAGAATTCAACTCTATCGATGTATAAATGCTCGGAACAAGTCTCCCCTTCCTCACTTTcgcaaatgaatttattttctatagaatCGTATGATTTCAAGTATTCTTCAGAAATGCCTACCCTTCCAAATAATGTTAGTGAAGTGGTTCAGAAAAATTCTCGTTCTCCAGCAAACGTTGGGAAGCAAGTTCCTTCAAAATACTGTCATGCTCCAAAAGTGTCAAGTGGAGAAAGTCAAGGATACGACCAAACACCTATGCTTGATTTCAAACAGCAAGAACAATGTGCATATTCCTCTCAAACGTCAAATTACTCCTCAGAATCACATTTGGAAACTTATTATTTACAAGGACCCTTTCCTTTCAATGTTGATGCCAGTCAGACTCATTACACTCCTCAAAGACATGCAAATGGACATGAAGAAAGTATATATCTGACAAGTAAGACATTCCCATCCCCCTCTCTTGATGGGCAAGTTGGTATTGGTGCCCGCTCACTTTGCCATAGTGATCGTTCTAGGGCATTGTTAGATTCAAATATATCTGCAGATTTAGTTAGGCTTGAAAGTTATTTGCATGTAGATTCAAAGCATGTGGTAAGCCCTTGTAGCCAGGATGGTTTTCATAGCAGTAAACAGTTTGACCATGATTTTCAGCAATCTACTTTTCCAAATGTAACTCATCATATGGTAGGGTCACAGTTTCCTCAGTTGTCTAACTGCATACAGATCACAGATGGATTGAAAATGAACGCTAGACCAAGTAATGGTGGTGATGATGATTGTGAGATTTTGGATTCAGTTAATGGGAAGGACATTGATGTTTTGGAAAGTGAAGATAGCAGTACTCAAGAATCTCTCAGTATTGCTGAAGAGGATGATATAATagttgaagaagaaattgaggaacctaaagagaaaaatactgtAGAAGAGGAAGGGGTAGAAAAGGCTATCTCCCCATCTGTGAGAGATTGTTCTAAAAGGTGCTTAGTGTGTGACACATATCATGTCCCATCTTTGCAAGCTTTTATCTTAATTCCCATAGAAGCAGATTCTCCTGTCACATCAGTGTCATGCCTTCCAGTGGCTACAAAACTGAGTCACATTCTACTGAGGAAGAGTAAGAACATCGAAGAAGATAGATTAAGGGATAGTGATGTTCAGGTTTCCAAAACTTTTCATGGAGAGTATTTGTGTGGTCGATGTCTATCATTAGTGGAAAGGGCAGATGATTTGGAAGTTAAACTTGGTGTGATATATCAAGACTTACAGTGTTTGTACAAGAGAACTACTTCACTAAGAAAGTGTAATAGCAATGTAAATGTAGAACTATGTGAGTCTGTTAGGAGAGACACCCATCCTGTTTCATATACCCCAACAgatgatgatgtaaaaaaagATGATACTCTTCATAGAAATGAGCATAGTAATGTTTCTAGCATAGCTCAACCAGAAACTAAGAATTTGGAGAGTAACAAGCCAAAGGAGGGACTGGAAGATAAAAAGTTTGTTTGTGATGTATGtgatatgaaattttctagGAAGGAATCTATGATTAAGCATATGCAGCTCCACACTGGAGACTTTTCATTTAGATGTGAGCATTGTAAAAAAGGATTTTCACGCCGTGGAGCTCTGGCACGTCACATAATCAGTAGACACAATGGTGATAAAGATCGACACCTTTATCAATGTGAACAATGTGGGAAAAGATTCACTCAGGAACATCATTTGCAGGTACATCTCTTGTCCCACAGAGGAGAATTGCCTCACATCTGTGAACAGTGTGGTAAGGGTTTTGCTAGTCAATATTCTTTGTCAGTACATTCACGAACTCATTCAGGTGAAAGACCATTTCCTTGCAAGTACTGTGGAAGGTCCTTTACTACTTGTTCAAACTTGAATGCTCATACTGCCATTTGCCCAAAAAACTGCCTAGTGAAGGAACCAAAGCCTCCGAAACCATTAAATCATTACTGCAGCTATTGTAAAAAGGGTTTTGCAAAGCCATCAGATCTGAAGGTTCACCTTAGGTCACACACAGGAGAAAAACCTTATGTTTGTGAAAGATGTGGGAAACGTTTTTGCAATTCAGGTAACTATAATCAACATGCTCGCTCCCACTGTAATGCAGTTTCACTGACTGAAGGAGAAGAACAGAAGAGTGTGGAGGATGATATTGGTGAGGCTTCAGAAAATGGAGACCAAGGTGTGAGTTCACCTAATGTTAAGTTGGAAAAGTCTCGTCCTTTCCAGTGCAAAGTATGTAATAAAGGATTCCCCAGAAAAGGTGCATTGACAGCTCATGAAAATCGCCATAAAGGTATAAAACCCTTTGTTTGTGATACCTGTGGCAAGGCATTTCCGGATCGCAGCAATCTGCACAACCATAGGCTACTTCATTCTTCAGTGAAACCTCACAGATGTGATGTTTGTGGCAAATCCATCAGATCTAGTTTAAAGGTTCATATGAGAACACACACGGGTGAAAAGCCTTACTCATGCTCTATTTGCAAGCAAAAGTTTGCAGTCAATAGCTCATTAACAGTGCATTTAAGAAAACATCATGACATTGATGGAAGTAAAAGTCATTCTCCTTAA
Protein Sequence
MEQHNKIGINSDSQICFMNLSQQTQNSTLSMYKCSEQVSPSSLSQMNLFSIESYDFKYSSEMPTLPNNVSEVVQKNSRSPANVGKQVPSKYCHAPKVSSGESQGYDQTPMLDFKQQEQCAYSSQTSNYSSESHLETYYLQGPFPFNVDASQTHYTPQRHANGHEESIYLTSKTFPSPSLDGQVGIGARSLCHSDRSRALLDSNISADLVRLESYLHVDSKHVVSPCSQDGFHSSKQFDHDFQQSTFPNVTHHMVGSQFPQLSNCIQITDGLKMNARPSNGGDDDCEILDSVNGKDIDVLESEDSSTQESLSIAEEDDIIVEEEIEEPKEKNTVEEEGVEKAISPSVRDCSKRCLVCDTYHVPSLQAFILIPIEADSPVTSVSCLPVATKLSHILLRKSKNIEEDRLRDSDVQVSKTFHGEYLCGRCLSLVERADDLEVKLGVIYQDLQCLYKRTTSLRKCNSNVNVELCESVRRDTHPVSYTPTDDDVKKDDTLHRNEHSNVSSIAQPETKNLESNKPKEGLEDKKFVCDVCDMKFSRKESMIKHMQLHTGDFSFRCEHCKKGFSRRGALARHIISRHNGDKDRHLYQCEQCGKRFTQEHHLQVHLLSHRGELPHICEQCGKGFASQYSLSVHSRTHSGERPFPCKYCGRSFTTCSNLNAHTAICPKNCLVKEPKPPKPLNHYCSYCKKGFAKPSDLKVHLRSHTGEKPYVCERCGKRFCNSGNYNQHARSHCNAVSLTEGEEQKSVEDDIGEASENGDQGVSSPNVKLEKSRPFQCKVCNKGFPRKGALTAHENRHKGIKPFVCDTCGKAFPDRSNLHNHRLLHSSVKPHRCDVCGKSIRSSLKVHMRTHTGEKPYSCSICKQKFAVNSSLTVHLRKHHDIDGSKSHSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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