Plon023581.1
Basic Information
- Insect
- Pachydiplax longipennis
- Gene Symbol
- snpc-4
- Assembly
- GCA_036926295.1
- Location
- JAVFKF010000004.1:54741698-54745134[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.9 1.2e+04 -1.2 0.0 10 24 98 113 97 116 0.80 2 6 2.4 9.8e+03 -1.0 0.0 3 18 158 173 157 174 0.87 3 6 1.4e-10 5.6e-07 31.8 0.8 1 45 270 316 270 317 0.93 4 6 3.6e-13 1.5e-09 40.1 0.5 1 42 323 368 323 370 0.97 5 6 1.4e-12 5.6e-09 38.2 0.0 1 42 378 419 378 421 0.98 6 6 1.3e-15 5.3e-12 47.9 0.5 3 45 431 474 430 475 0.96
Sequence Information
- Coding Sequence
- ATGTCATCTTGGGAGTTAGAAAGTTGCCTTAATGGATATTTTGGCTACAAGGAAGATGGGAGCAATGATGATGACTCAATTGGAAGGCTATTCCTTGACGAAATTTCTAGAGATGGCAATCCGCAGTTGGTATTAAACGACAGTTGCTTTGAACAACATTCTGAGGACGAATTCGATGCGGAGTTCGGAGAAAATACATTGGATAAACAATACATATCTGTATTAGAAGACCTATCCAGTAAAATAATACATCACCTACACCAAATTAAAGACAAGAAAATATGTACAGAGAGGAGACTGAAACAGCTAGTTGAAACTAAAGGAAAACCACAACCTAGAAAAAACTGGTACCATTTATTTGGTTCTCCATATTTCAAGGATAAAACTTTCTATCCATGCCCTGGAAATGAAGACTTTTatgaaaaactggaaaaaaatgaaatcaactACCATGAGTTACCACCTGTTCGAAGATGGAAGGCTTGTGATCAGCAAAGACTGGAAGAAGCAGTGAGAAATAACCTCATAGAAATTAGAAAGAAGGAATTGAAGATGGTTAAAGAGgttattgtaaaaaaattgaaagtcgATGTCTTGACAGCGGAGGAAGAAGATGACCTTGAGTTAGAGCTTCAAAACCTTGATCTAGAAATTATGgaagtggaaaataaaactatgGAAGAGTTGTTGGAAAGGAATTGCAAAGAATTAGACTGGCTTCGGATTTCTGCAGTTGATTTTGATGGACAAAGAACATCAGAAGAACTGAAAGCTATGTGGGATTTCTGCCTCCAACCTTGCATTTCCAAAAGGAATTGGTCCCAGCAGGAAAGTGAAAAGCTAGCTGAGATAGCAGAGAAGCATAACTTGGAAGACTGGGATGAAATTGCTAGAGAGCTAAACACAAAACGCTCTGGTTTCCAATGCTTCGTGCAATACCAAAGAAATCTAAATAGAAATCTGAAGAAAAGCAAGTGGACTAAAGAAGAGGATAACAACCTAAAGAGGATAATACAAGAATGCCGGGTTGGAGATTTTATCCCCTGGTCAAAGGTGGCTCTGCAGATGAATGGCCGAACAAAAGTTCAGGTTTATAATCGCTGGACATACTCAATTGACCCAATGATTCGTAAAGGTCGATTCACTCCTGAGGAAGATTGTCTTATTGTGGCTGGTGTTCAACGCTTTGGGAAAGACTTCCCTCGAATATCTCGTTTCCTTCCTGGCAGAACTTCTATCCAAATTCGTGATCGCTTCATAGGAAGTTTGCAGAAAGTTGGCCCAATCAGTCGATGGACTAAGGAGGAAGACCAGCTATTACTTGAACTGGTAGAGAAATTTGGCACCAAATCCTGGAATAGAATATCATCTCATTTCAGTGATCGTTACAGATGCCAAGTTCGTCATCGATATTTAACTCTTAAAAAATGGTTGGCTAAGTACCCAGATTTCTCAGTGAGTATAAAGAGAAAGTCTTAA
- Protein Sequence
- MSSWELESCLNGYFGYKEDGSNDDDSIGRLFLDEISRDGNPQLVLNDSCFEQHSEDEFDAEFGENTLDKQYISVLEDLSSKIIHHLHQIKDKKICTERRLKQLVETKGKPQPRKNWYHLFGSPYFKDKTFYPCPGNEDFYEKLEKNEINYHELPPVRRWKACDQQRLEEAVRNNLIEIRKKELKMVKEVIVKKLKVDVLTAEEEDDLELELQNLDLEIMEVENKTMEELLERNCKELDWLRISAVDFDGQRTSEELKAMWDFCLQPCISKRNWSQQESEKLAEIAEKHNLEDWDEIARELNTKRSGFQCFVQYQRNLNRNLKKSKWTKEEDNNLKRIIQECRVGDFIPWSKVALQMNGRTKVQVYNRWTYSIDPMIRKGRFTPEEDCLIVAGVQRFGKDFPRISRFLPGRTSIQIRDRFIGSLQKVGPISRWTKEEDQLLLELVEKFGTKSWNRISSHFSDRYRCQVRHRYLTLKKWLAKYPDFSVSIKRKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -