Psmy005458.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Gata5
- Assembly
- GCA_030142225.1
- Location
- JARQST010000309.1:2803842-2810076[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-16 6.1e-13 48.3 3.2 1 35 479 512 479 513 0.97 2 2 6.1e-18 1.8e-14 53.2 6.7 1 35 538 571 538 572 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAGACTTTGGTCAAGCAGGAGATTAAGGTAGAGTGGGACAGTCATCCTCCGGAAAACAATTCTCCCCAGGTTCCGCAGACCGCTGAGGAACAAGCTGGTGGAAGTCCCCAGAGTGTCATCACAACGAGGAGACACGTCAGGACCATCACTACGGCTGGACAGATCACAGAGAGCATTGCCGAGCCTGAACCAGAGTCTCCTGAACCAAGTCCGGTCGCTGCGAACATTCAACAAGTTatacagcaacaacagcatGGCGTTCAGGAACAAGAGCAACAATACGTACAGATTTCTCATGGTGGAAGTCCCAGGGAACAGCAACATACAGCGGATCAGCAACACGTAGTTTATTCCAATGGACAGGACAATCAAGTTGAAACGTCCGAAGCTGCGGAAGCGACAATTACGCTACCTGTCAAGGAACCACCTAGGTACGAGACTCTGGCACCAGAGAGAGCGGAAGTGGAGCGTGTCTACGTCTACGCGGAGGAGTCGGAAGTCCGTAGAGATGGTCATCCCGTAAACATCCAAGTGCAGGATCATCGACGTCCTCAGCAGAGTCAAGCTCACCAAAGATTCAGCCCGCACGAGAACAATCAGACACCTAGGTTCCAGGGTTCGCCAACTGGTCATACTGAAGAGTACGAAGCTTCACCCTTGGTATCCCAAGCTGGTACCGTCCAATTGAATTCTCCAGCACAGCCATATTCACCTCCTATAGACGGCATAAGGACGACCCAGCAACAGCTTGTTGCTGCTGGATACTCCGACGGCGGAGGTGGTTCTGCTAAATACGATGCTGAAGCTGCTGCTGCCGCCGAAACTATAAAGGGTTCCAGTACATATACTACCTTGGAAACAGTCGCACTACCACCATCTCAACCAGTTCAGTACACTCAATATATATCAGCTGCTGATACTTTTCAGCAAACAGCAACCAGTTACAGCTACACCAAATCTGGTGAATTGTACTTGACTTATCCAACAAGCAGTCAAGCGGGTTCTAGAGGATCGGAGGTTGACTCCCCTGGTAGCGTTTATATCAAAAGTGATCCCACCCTGACGTCATCGTCACTCCTAGGGGGTGGCAGACCAACATCCATCCACTACGAACAACCAGCATCCCCAGGATCTCAAGTGACCCTCTACGGCAGTGGCGCAACCATGTACCAATGTGTAAAACCTACCGGCGACCAATATTGGCCAACTGGTGCCCAATCGCCACCCCCATCCTTGGACTACGTCCAAGGCTATTCTGGCGTAACAGCAATTTCAGCCAGCGACGCAGCAAACATGCAACTTTACTCCGGGGGTACATACAGCGTCACAGGGGGTGGAAATGGACCACCGTCTCCTTGGGCTACCTTGCCACCATCCGGTGCTGACGATGGGTTCGAAGGACCTATCATAACGAACGAACTCAAGGAATGCGTAAACTGTGCTGCTAACATGACACCCTTATGGAGAAGGGATGGTACCGGACATTATTTATGCAACGCGTGCGGTCTCTACAGTAAAATGAATGGAGTGAATAGGCCGCCCATGAGATGTGCCAAACCTAAACAGTCTGTCGCACcgacCGGTGGCAGAAGGACGGGTGTGCAATGTGCCAATTGTAGAACTAGCAACACTACACTGTGGCGACGAAATAACAATGGAGAACCAGTATGCAATGCTTGCGGTCTTTACTTCAAGCTACACAATGTGAACAGACCACTGAGTATGAAAAAGGACGGAATCCAGACAAGAAAGCGAAAACCAAAGAATCCCTCGGCCATGACCGGAAGTCTAGCTGGACCAAGCGGGATGCACAAGACCGAGATTAAGTCCAGCTTACTCGtgGACCCGAAGCTGCAGCTGAATATGTTTACCAGCGGTGGTGGTAATGGGGGTGGTGATGAACATTATCTTCCTGTGGGAACACTCACTACGGCACaattggcgcatgcgcactcacCCCTTGCGTTACCATCGGCCGCGGTATTGAATCGACAAACTACCCTAACcGTGCCCCCACTAGAACCAATGACTAGTCGATCGGGTGCGGATCTTACCTCGGTCATCACTTCGACGACAGCCGCACGTACCGATCGATCCTAA
- Protein Sequence
- MKETLVKQEIKVEWDSHPPENNSPQVPQTAEEQAGGSPQSVITTRRHVRTITTAGQITESIAEPEPESPEPSPVAANIQQVIQQQQHGVQEQEQQYVQISHGGSPREQQHTADQQHVVYSNGQDNQVETSEAAEATITLPVKEPPRYETLAPERAEVERVYVYAEESEVRRDGHPVNIQVQDHRRPQQSQAHQRFSPHENNQTPRFQGSPTGHTEEYEASPLVSQAGTVQLNSPAQPYSPPIDGIRTTQQQLVAAGYSDGGGGSAKYDAEAAAAAETIKGSSTYTTLETVALPPSQPVQYTQYISAADTFQQTATSYSYTKSGELYLTYPTSSQAGSRGSEVDSPGSVYIKSDPTLTSSSLLGGGRPTSIHYEQPASPGSQVTLYGSGATMYQCVKPTGDQYWPTGAQSPPPSLDYVQGYSGVTAISASDAANMQLYSGGTYSVTGGGNGPPSPWATLPPSGADDGFEGPIITNELKECVNCAANMTPLWRRDGTGHYLCNACGLYSKMNGVNRPPMRCAKPKQSVAPTGGRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKNPSAMTGSLAGPSGMHKTEIKSSLLVDPKLQLNMFTSGGGNGGGDEHYLPVGTLTTAQLAHAHSPLALPSAAVLNRQTTLTVPPLEPMTSRSGADLTSVITSTTAARTDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01199810;
- 90% Identity
- iTF_01475866;
- 80% Identity
- -