Psmy002872.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- CAMTA2
- Assembly
- GCA_030142225.1
- Location
- JARQST010000230.1:64482-82216[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-47 3.3e-43 146.3 2.5 2 116 178 290 177 290 0.98 2 2 0.31 6.2e+03 -2.9 0.2 52 72 444 464 427 485 0.46
Sequence Information
- Coding Sequence
- ATGAGGCAGGTGGTGGTGTTAGAGCCGGCGGGCAGCGTTTTGGTGATCAGGCAAACTTCTTTGGGAAATGGTGTAACCAGTGTTACCACCACTTCGAATACAATTTCTGGATCCAGCAGCCACAATGGCCACGAGCATGCTCTTACGAATGGCACCGTCTCCACTCTCTCGACTAACGACCACAATCAGAATCGAATTGTCGTCGTTAGATCTTCCACGACGTCCTGTATGACTACCTCGagtGACACCAATGCGAATGCTAATGGGAACTGTAatgttaacaataataaaagtaatcaGTCGATAACGAAGCTGAGCGAACGTAATGATCAGCTGAGGAACGATCATAAGAATCAGGATGGTTCGAATAATCGAACGGAAAATAGTTCAGGAAATCGACAGAAGATCAAGGAGAACGGTCACGATTCTACGGTCGACAGGAAGTCCGAAGTGGATCAGGCTTCTGATGGCGACCCAATCAAGCTTCCGGAAAACCTGGAAACACTACCACGGGCCGAGCACTTTCCCACCCAGAGGCATCGATGGAACACGAACGAAGAAATTGCGGCGATCCTGATAAGTTTCCAGAGACACGCAGAATGGCAGAGTCGCGAGGTGAAGGTGCGACCAAGAAGCGGTTCCATGCTGCTCTACTCCAGGAAGAAAGTACGTTATCGGAGGGATGGTTACTgctggaagaaaagaaaagacggCAAGACGACAAGGGAGGATCACATGAAGCTCAAGGTCCAGGGTGTGGAATGCATCTACGGATGCTACGTGCACTCGGCCATTCTCCCTACGTTCCATCGAAGGTGCTACTGGCTCCTTCAAAATCCAGATGTGGTCCTCGTTCATTATCTAAACGTTCCTTACCCGGATGGCGATGCTAAGCTCGCAGCTCTGCCACCGTGTCTGGCGCTGCCGccggataaaaaagaatggacGAGGGACGAACTGGCCTCGCAGTTGAGGCCGATGTTCCTTGGCGGTGACGATGATCCTAACAATCCTCATGTTAATCAACAGTCGACCCATTCTGTGGATATGATCGTCACTCAGCTCTTGGATAGGCAGCGAGCATCCTCGAGCTCATCCACGAGCACTGCGCAACTCGCGCCTAGGAGACTTACGCCTGACAATCAGGTCTCATCGACGACCGGAGGTCAACAATCATCTACCACGGCGTCGACGGCTCCACGTGTATACTCTCGACATTCCCACTCTACCCAGAGTCAGCAACCAGCCCCCTTAGTATTAAGTTTGCAACAAATTCAGGGTGGAGGTGGTTTACTTATTCTTAATAGTCAGCCATATCATcatcagcaacagcagcaacagcaacagcagcagcaacaacaacagcagcagcagagtCAACAGGTGGAAATGCAGCAGGTTACTGAACAGCAGATCATTCAGCAAACTAGCGTCGATCGAGAACAACAGACTCAGCAAGAGATCGATACCCAGGATGGTATTGAAAGATCAGCTGTTCAGACGCTACCGACGCCCGTAAGTGGCACCGGCGTCGCGGACTTTGCCGAGACGCTTGATCTTAGTCAGGAAGACATACAGAGGACATTGTCGGCTAATATGGTACCTCCGTCTCCGTCGCCATCACCggctgataataatattatcaatcccatggattttattaattcttccGATGACGTGCTTGTCAATCTCGACGCCTTTGACGTCTTCGGCGACCTGTCCGAGTTACACGATTTTGAAGCCGAACAGGCTAAAGCGGATGATCGAGGTGGTCCTGAGAATGATACAGCCTGCCATCCTGGAACTACCGTCCATATTGCTGAATATAGCCCAGAATGGAGTTATACCGAAGGTGGCGTTAAGGTCCTAGTAGCCGGACCATGGACAGGTGGCACTGGATCTCAATCGTATTCCGTACTCTTCGATGCAGAGCCCGTAGAAGCGTGTCTGGTACAACCAGGAGTATTGCGCTGCAGGTGTCCAGCACACGCTCCAGGTATAGCGTCACTTCAGGTAGCCTGTGACGGCTTCGTGGTGTCGGACAGCGTAGCATTCGAATACCGGCGTGCCCCAACGGCAGAGCCTAGTCCAGAAAAAGCTCTGCTGGATCGTTTGGCAGATGTAGAGGCGCGTCTTCAGGGACCTGGACCACCATCCCTAGCAGCCCACCTTGAGGAACGCCTCGTAGCCTATTGCCAGGACGCCGTGGTGAGACCCTGGCGTGCTGGTGCGGAGCCTCTACAATCCGGTGGACCGACGCTCTTACATCTGGCTGCTGGTCTGGGATACTCACGACTAGCTTGCGCCCTTCTCCATTGGCGGGCCGAGAATCCTAGCAGTGTCCTCGACGCGGAAGTCGATGCTCTCAGGCAAGATGCCGCAGGATTGACTCCTCTTGCGTGGGCTTGCGCTGCAGGACACGCCGACACCGCCAGAATTCTGTACAGGTGGAACGCCATGGCCCTGAGAGTACGAGACTGTCAGAATAGAAGCGCCACTGAATTAGCAGCTGAGAACGGACACAGGAGCATTGCCGAGGAGCTGAATCAACTGGAGGCCAGACGTCAGGATGAGAGGTTGTTCCTGCGACCAGCAAGCCCCAGGAGGCCATCGCAAGACAGCGGTCTCGATCTTGCATTATGTGGCTCGCCGCTCCTGGATAACATGGAGTTGTTGCAAGAGGACGAGTCGTCGTTAACCCTCGGTCAACAGGGGATGGAAAGTGCCCCGAGCTCTCAAGAGACTGTAGggGAAGAAGATGCGAGGGTCCTCACTCTGGCAGAGCAAATTATAGCAGCTCTTCCGGAGAGGATCAAGAGAGCCGAAGGTGATCCACCTTCGCCGTCAtcgccgccaccaccgccaccctTGGAAGACGCCTTGATGGAGCAGATGCCATTAGATTCTGGAGAATTATTCGACTTGTATCGCGACTGCAGCGGAGGTGCTGCTTCCGTTTCTGATGCAGACGCCGATGCAAGTCCCTCGAGTCCTTCTAGCAGTTGCTTGACACCTGACTCGCCGTCACCACCACCGACAACTGCAGACTTCTGTGAGTTTCTGCAGCTGCAGCTACAGCTGGACGGTGGGAACGGACATAACGGACAGTATGGATACAATAGCAGCGATCGCACCATTGGTAATGGAGTCTGTGGTAATGGAAACGGCGGTACCGGAACTGACGGCGGAGAAGCAGACCTCAGTAGACTTACTCTATCGGATCGCGAACAGCGTGAGCTGTATCAGGCCGCAAGGATGATACAGAAGGCCTATAGGAGTTACAAGGGTCGTCAGAGACAGGAAGAGGCTGAGAGACATGCTGCTGTACTCATCCAGCAGTATTATCGCCGGTACAAGCAGTACGCATACTACAGACAAGCCACCAGGGCAGCGCTGGTGATACAAAGTAATTATCGCAGCTACAGAGCGAGACCAGGATCCTCAAACTCCAGACAACAGGCAGCCCATCAGCAAGCTGCTCATCAGGCTGCCCGAAAGATCCAGCAGTTTATGCGTCAATCAAAAATCAAACTGCAGAACGCCAGGGCCGTCGCAAGCGGGAACGGGAGGCAGCCAGTGGGCATTTCACGGGGGGCTGCTGCCCTCCAAAACTCGCCCTCATCTAGCCCAGGGGCCAACCTAGTAGCCGCCAGCCCAGTAGCCGCCAGTCCCGACATCACCTAG
- Protein Sequence
- MRQVVVLEPAGSVLVIRQTSLGNGVTSVTTTSNTISGSSSHNGHEHALTNGTVSTLSTNDHNQNRIVVVRSSTTSCMTTSSDTNANANGNCNVNNNKSNQSITKLSERNDQLRNDHKNQDGSNNRTENSSGNRQKIKENGHDSTVDRKSEVDQASDGDPIKLPENLETLPRAEHFPTQRHRWNTNEEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHVNQQSTHSVDMIVTQLLDRQRASSSSSTSTAQLAPRRLTPDNQVSSTTGGQQSSTTASTAPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQQQQQSQQVEMQQVTEQQIIQQTSVDREQQTQQEIDTQDGIERSAVQTLPTPVSGTGVADFAETLDLSQEDIQRTLSANMVPPSPSPSPADNNIINPMDFINSSDDVLVNLDAFDVFGDLSELHDFEAEQAKADDRGGPENDTACHPGTTVHIAEYSPEWSYTEGGVKVLVAGPWTGGTGSQSYSVLFDAEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPTAEPSPEKALLDRLADVEARLQGPGPPSLAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDAAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRSATELAAENGHRSIAEELNQLEARRQDERLFLRPASPRRPSQDSGLDLALCGSPLLDNMELLQEDESSLTLGQQGMESAPSSQETVGEEDARVLTLAEQIIAALPERIKRAEGDPPSPSSPPPPPPLEDALMEQMPLDSGELFDLYRDCSGGAASVSDADADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGGNGHNGQYGYNSSDRTIGNGVCGNGNGGTGTDGGEADLSRLTLSDREQRELYQAARMIQKAYRSYKGRQRQEEAERHAAVLIQQYYRRYKQYAYYRQATRAALVIQSNYRSYRARPGSSNSRQQAAHQQAAHQAARKIQQFMRQSKIKLQNARAVASGNGRQPVGISRGAAALQNSPSSSPGANLVAASPVAASPDIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00295239;
- 90% Identity
- iTF_00296771;
- 80% Identity
- -