Psmy004808.2
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- -
- Assembly
- GCA_030142225.1
- Location
- JARQST010000301.1:1958777-1959440[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 0.00021 21.5 0.1 3 39 21 58 20 59 0.96 2 2 0.62 5.7e+02 0.9 0.0 8 20 98 110 98 113 0.84
Sequence Information
- Coding Sequence
- atggctagTAAGAAAAAACCGAACAAATCGTCGAATGCAACAGACGATGCTGCCATTACAGCATGGACAAAGGCGGAAAAGTTTGCTCTTttgaaatctttgaaaaaatacggGCATAAGGACACTTCAAAAATTGCAGAGACATTACCAAACAAATCACAACGTgatataaaaacattaattgacaaattaatGAAGCAAGCCCGCTGtaagaaacgtataaaaactGAATCACCAATTGATAACTGGTTAGCAAGTGGTATGTTTCCTGATACCGATACTCTTATACCTGAAGCATTATTGTTCATACAGTTGTATGAGAAGCATCCACCGAAAGAGCAAACTGGTGGATGTGATTTAAGTgaagtatacaattttttatataggatGGTACTTGGACAACCCACTGTTGGTATTTCTTCTGAGGTGGAAAAGACTGtatatcatttaatatcaAGTATTATTAAAGAAGTATGGCCTGCGTCTCAGACTGAAATTCTAAACCAGATTGCTAAGCTGTCTGTCAAACGAAAATGTTTCAAAGTATAtcctggtaaaaaaaatgttcataatgttatattatactaa
- Protein Sequence
- MASKKKPNKSSNATDDAAITAWTKAEKFALLKSLKKYGHKDTSKIAETLPNKSQRDIKTLIDKLMKQARCKKRIKTESPIDNWLASGMFPDTDTLIPEALLFIQLYEKHPPKEQTGGCDLSEVYNFLYRMVLGQPTVGISSEVEKTVYHLISSIIKEVWPASQTEILNQIAKLSVKRKCFKVYPGKKNVHNVILY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00296717;
- 90% Identity
- -
- 80% Identity
- -