Psmy008144.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- -
- Assembly
- GCA_030142225.1
- Location
- JARQST010000399.1:3374906-3384604[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-15 2e-12 47.2 0.7 3 43 175 215 173 218 0.96
Sequence Information
- Coding Sequence
- ATGTATATCACGCAGCTCTGGAACCTAGGTCTGATCAAAGATGCGTCTAGAGATTGGCTAGTGATCGGAGCGGCTCTAAAATCTGAAAGCGGCAGGCAACTGGGTCCTCATGCCTGTGCGATTTGCCAGAACGTAGTCGAAGGTGGCACGCAGAGTAGAGCATTATCCAGGAGTCAAGCATCTCAGTACGGGCTGAGAGAAGATCAGGTTACACCGGGAGCTCGAGTGTGTAATACCTGTAGGTGTAAAGCTGTGCGAGGACGATATACAGCTTGTCCATTGCCCGGATGTCCTAATTTGAACAACGCAAATTCCAAGACGCGAGTGAAACGGTTACGTGCTCTCCCACAGAAGTGGAATGATCTACCTCTGGAGATAAAGGATCCAGTCATACAAGAGTTTCaaatacCGAACAACGTGACCAAGTGCTGTTCAGTGTGCTTCAGCAGGATATCGCGTAGATTAGCACCCCATTTATCAGGGGGTGCAGATCCTGCAGAGGATGCTGATGCCTTCTCGCGACAGTGGACGGACGAGGAAGTGGAGAAGTTGAGAAGAGCTTTGCGCGAGCATGGCACGAACTGGTCGAAGGTCTCCGAGCAGATATCCGGAAAGTCGAGTCACcagtgtaaaaattattacctgGCGAATCGTAAGAAACAGGGTCTTGATCAGATGGTTATTGAGTATCATCAGTCACTtggagaagagagaagacCTTGCCTTACGGATGAGGAAGAAAGCGGAAGTAGTACGAGTAGCTGTGATGAATTGGCTGTGCACGACTCTAGCGACACGGCCAGCGCGGGTAGTCCTGCGAATACAATATCGAGCAGTACACCAGTTGCGGCGACAACAAACGCCACCTTGTCGATTCAGCAGTCAACGGACActaaattaaacgaaaaattgtcGGATATCGCTGTAGTTTCATTGGTACCGCCCTCTGTTAACATAACCACGTCCCAACAAACGTCAGGATCTAGTGTACAGCAGGCAGCGGCCAATCGTGAGGATTATGATAGTTCCGCCACGGAGACGGCGGACGAGGGTCAGGGTGGCGCCGATTTGGATAATAGCAGTGTCGTTGTGACGTTAACGCCTACCAATACGACAACTATATTGCAGCAGCAACAGCCACAGCAAGCGCCAGCTATCATACACTCGCCACCTTCGACGACCAGCAGTGCTAACCCACTCACTGTCAAGGATCTCATGCTAGGTGTTATAGAGATGCAGCTTAAACGGAATCCTAATAGTCCTGCCGGAAGTGGTGGTTCATCCATTCCTGCGAGTTCCGGAACTCCTACGATATCGAGCATCCTCAAGACGGATCATCGCAACGATATTACCTTTGTGCGGGAGTACAAACCAGCTGCGAATATCCCTACTGCCATGTCCAATAGGGACTCTAATCTTGCGACGCTTTCCGTCGTTTCCGGACCTCATCATGGTCATCATTCCACGCCCAGTCCTCAGCAAATAGGTCAAATGCAAGCTACCATAACACCTTGTCCACCTCCAGCGCCAAGTAATCAATCTCAAACCTCGGATCTCCTTCCCAAGGAAGGCTTGGTGGTAGTCCAAGTTCAACAGGCTCTCAGAGAAACGGAGGGTACTTTGGATCTGAGTATAAAGAAGCCCAGACAACAGGAGTATAATCACTCGCTACAACCACCGCACAAACCACCACCCGTCACCATATACCGCACGGAACCACCCCAAGGAGCAGCATGCACGTCTTATCATACCGTTTATCACCATTCCCATCCGGAACAAGGCCGTGGTGCGAAGAGTCCTTTGGTTTACGCATCATCACCAAGACCTCAAGCTCCATTGACACCGAAGATGAACAAAGTAACAGTACAGCCCCCTCATCCGAAGTTGTCTCCAAAGTTGAGTGGAATTAGTTCCGGTCACAAGGGTGGATCAATCACTCACGGCACTCCAGTATCTGGTGCCCGTTACGAAGGTCTTCTCAGGCAAATGACTCCTCCAGGAAGTACTGGTGGTGCAGGGAGTACCGGTAGCAGTCAGGGTCCAAAGGAAACTGGCTCCATCACTCAAGGAACACCAGTGCATCCATTTGCAGTGGATAAGAGAGCACCAATCTATGACTATCATCGATCCATCAGGCATTCGCCAGCTAATGCAGGGAATGTTTCTGGCCAGCCTCAGAATCAGGGCGTAGTAGTTACCCACGGTAACCAATACAATTCCTATCCAACTCGCCCGCCGCCGAGCTACACGATGGAACAGCAGCTGTCATCGAGACAGATTATCATGAACGATTACATAACGAGTCAACAGATGCAGCATCGAAGTCGAAATCCACCACCTGCTGAATCTGCGGCAAAGAATGAACCTCAACCCACGCTTTATTATGCGAGTACACCTCCACCACAGTCTCATACGCAACCCAGACAGGGTGTTATTCAGAGGCACAATCCTCAGAAGCAGATGCATTATCCTCCACCTCCAGGGTTAGAAGCTTTTTCTAGCCTAGTCGATGTGGCAGTTCAGCAGCCTAGTTTGCCCGTACCGCATCCACATGGTCACCCACCGTCGGGAAGCAGTGGTCACGAAGGCTTAGGCAAGACGATGGCAGATCGTCTACTCGCGGATCGATATGTAGACAACAACAGAGCTTTCCGCGAGCAGGAAATTAGGCTTCAGGAACATCGTCTGGCTATGCAGCAACAAGCCGAACATCGAATGGCCGTCGTTCATCAGCAGCATCGAGATCGTGAGCGAGAAcgggaacgagagagagatcTTGCTCATCtacgtgaaaaagaagagcaCAGATTACAGCGCGAGAAGGAAATACAACATTTGGAGCATCGGCTAGCTGTTCAGCAACAGGAACATCGTTTAGCgcaacagagagaaaaagaaatgcaacaTGCGGAGCACAGGCTATCGGTGCAGCAACGCGAGAAAGAGATTCAACACACGGATCACAGAATGGCGGTGCATCAGCAACGGGAGAAGGAAATTCAACAACAATTGGCCGCTGCACAGCGCGAAAAAGAACACCAGGAACATCGGCTGGCAGTACAgcagcgagagaaagagattcaacaacaacagcaggaACATAGGCTGTCGGTGCAGCACCAGCGTGAGAAGGAGATACAGCAACATCACGCTGAACATCGAATGGCAGTGCAgcaacagagagaaagagacttGGCTCACttgcaacaacaacaaatgcAACAAATACAGCACATCCAGCAACAACAACGCATCGAGATAGAGAGGCGGCATATAGCTCAGATTTATCGCgatcagcaacagcaacaacttGATCGTGAATCTTCTCGGATGCTTGGCAGTGGTTTTCCTCCGTCTTCCAGGatacaacagcaacagcagcagcaacagcaacagcaacaacagcagcagcagcaacagcagcaatcCGCCTCAAGGCAGGGCCAGTCTGCACCTAATCAGCAGCAAAACGAATCCTCGTCTACCTTAACAGCTGCCAGTCTAATCGATGCCATTATCACCCATCAAATAAATCAGAGCGTTGAAAATACTGGCGGAAGTCCTGCTTCTAATAGTCAACCCACTAGACCTGGTGATAGACTCTTTCAGGGATTTCATCGGGAAAGCCCAGCAGAGTCAAATGGTGCTGCACATAGTCCTGCTGGTGATGGTGGAAGCGGAAACAGTGGTTCCGGTCCTGGTAGCGGAAGTGGCAGTGCAAGCAAAACTATTACCCTCGGAGAACACGTGGATCATATAGTAACCAAGGATTACGGATCTCCACACGGTTCTTATAGAGCATACCAAGGATACCACGAGGACCAGTGGAAGAGACGAAAAGTAGCCGAACCCGATTCCGTAAAGTCAGGTGACGAGCGACAGATAATTCGCGTTGctcaacagcagcaacaacaacagcaacaacaacagcagcaagcACCTTCGGTGGCGAAGCAACAGTTCCATTCCGTAGAGCCAGTATCGCCACCGGAAGCCACAACAAATCACTACGCAAGACGGTTCTACGAAACAAGCACTGCCACTACGACTTCCGGTACCCCAACTAATAAGCCACACCTCTCGCCCCTGGATtatgtaaagaataaaatcgtCGAGGTCATGAGAACATCCGAGGATGACAAGGCCGGTACGCCAGGCGATAGAAATGGCGGAAATAGCTCCGGTGAGAAGGATGATAAATCCGGCACAGGCGTAGACAGTCCATCCGCTGGTGAAGTGGTTATCGATGAGTCGCCTAATCAGCCTCAACAACCACCAGCACCTGCGCCTACCACTTTCTATCCGTTTAGCGCCCTGGGTGTACACACTGGACCGCCACCAGCGCCACCACCTCCAACTTCCGCTTCCGCATCCGTAACAAAAGCCGAACAATCCCAGGCAGAACCCGCACCGCTTTTATCTGCTCAGTACGAGCCACTTTCGGATGAGGACTGA
- Protein Sequence
- MYITQLWNLGLIKDASRDWLVIGAALKSESGRQLGPHACAICQNVVEGGTQSRALSRSQASQYGLREDQVTPGARVCNTCRCKAVRGRYTACPLPGCPNLNNANSKTRVKRLRALPQKWNDLPLEIKDPVIQEFQIPNNVTKCCSVCFSRISRRLAPHLSGGADPAEDADAFSRQWTDEEVEKLRRALREHGTNWSKVSEQISGKSSHQCKNYYLANRKKQGLDQMVIEYHQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANTISSSTPVAATTNATLSIQQSTDTKLNEKLSDIAVVSLVPPSVNITTSQQTSGSSVQQAAANREDYDSSATETADEGQGGADLDNSSVVVTLTPTNTTTILQQQQPQQAPAIIHSPPSTTSSANPLTVKDLMLGVIEMQLKRNPNSPAGSGGSSIPASSGTPTISSILKTDHRNDITFVREYKPAANIPTAMSNRDSNLATLSVVSGPHHGHHSTPSPQQIGQMQATITPCPPPAPSNQSQTSDLLPKEGLVVVQVQQALRETEGTLDLSIKKPRQQEYNHSLQPPHKPPPVTIYRTEPPQGAACTSYHTVYHHSHPEQGRGAKSPLVYASSPRPQAPLTPKMNKVTVQPPHPKLSPKLSGISSGHKGGSITHGTPVSGARYEGLLRQMTPPGSTGGAGSTGSSQGPKETGSITQGTPVHPFAVDKRAPIYDYHRSIRHSPANAGNVSGQPQNQGVVVTHGNQYNSYPTRPPPSYTMEQQLSSRQIIMNDYITSQQMQHRSRNPPPAESAAKNEPQPTLYYASTPPPQSHTQPRQGVIQRHNPQKQMHYPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPPSGSSGHEGLGKTMADRLLADRYVDNNRAFREQEIRLQEHRLAMQQQAEHRMAVVHQQHRDRERERERERDLAHLREKEEHRLQREKEIQHLEHRLAVQQQEHRLAQQREKEMQHAEHRLSVQQREKEIQHTDHRMAVHQQREKEIQQQLAAAQREKEHQEHRLAVQQREKEIQQQQQEHRLSVQHQREKEIQQHHAEHRMAVQQQRERDLAHLQQQQMQQIQHIQQQQRIEIERRHIAQIYRDQQQQQLDRESSRMLGSGFPPSSRIQQQQQQQQQQQQQQQQQQQQSASRQGQSAPNQQQNESSSTLTAASLIDAIITHQINQSVENTGGSPASNSQPTRPGDRLFQGFHRESPAESNGAAHSPAGDGGSGNSGSGPGSGSGSASKTITLGEHVDHIVTKDYGSPHGSYRAYQGYHEDQWKRRKVAEPDSVKSGDERQIIRVAQQQQQQQQQQQQQAPSVAKQQFHSVEPVSPPEATTNHYARRFYETSTATTTSGTPTNKPHLSPLDYVKNKIVEVMRTSEDDKAGTPGDRNGGNSSGEKDDKSGTGVDSPSAGEVVIDESPNQPQQPPAPAPTTFYPFSALGVHTGPPPAPPPPTSASASVTKAEQSQAEPAPLLSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01473110;
- 90% Identity
- iTF_01199336; iTF_00770303; iTF_00252747; iTF_00253496; iTF_00254253; iTF_00252001; iTF_01395055; iTF_01473110; iTF_00296705; iTF_00294404; iTF_00295942; iTF_00295176; iTF_00292873; iTF_00291466; iTF_00297482; iTF_00293650; iTF_01474615; iTF_00298239; iTF_01473850; iTF_01475380;
- 80% Identity
- -