Basic Information

Insect: Pachycephus smyrnensis
Gene Symbol: BAS1
Assembly: GCA_030142225.1
Location: JARQST010000338.1:2443922-2446714[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.093 85 3.5 0.0 3 18 177 192 176 204 0.88

2 7 4.6 4.2e+03 -1.9 0.0 22 42 246 268 240 269 0.72

3 7 9.6e-11 8.8e-08 32.3 0.3 1 44 278 323 278 324 0.95

4 7 3e-11 2.8e-08 33.9 0.4 3 43 334 378 332 381 0.95

5 7 1.9e-13 1.7e-10 41.0 0.0 1 45 387 432 387 433 0.97

6 7 2.7e-15 2.5e-12 46.9 0.1 3 42 442 481 440 485 0.95

7 7 9.8 9e+03 -2.9 0.0 11 20 596 605 595 608 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.093	85	3.5	0.0	3	18	177	192	176	204	0.88
2	7	4.6	4.2e+03	-1.9	0.0	22	42	246	268	240	269	0.72
3	7	9.6e-11	8.8e-08	32.3	0.3	1	44	278	323	278	324	0.95
4	7	3e-11	2.8e-08	33.9	0.4	3	43	334	378	332	381	0.95
5	7	1.9e-13	1.7e-10	41.0	0.0	1	45	387	432	387	433	0.97
6	7	2.7e-15	2.5e-12	46.9	0.1	3	42	442	481	440	485	0.95
7	7	9.8	9e+03	-2.9	0.0	11	20	596	605	595	608	0.81

Sequence Information

Coding Sequence: ATGAGTGATCTAGAGGACTATACTCTTCTGGATGATATAAAAGCTTTGGAAAATGCTTTGGCACAAAAGAATCAGTCGCCGTCGCCCTCGACAAGTACAACGGCGAAAAACGTTGTGTCTAACCTTTATGAGAAAAGGGATTCTGTTACTTTAACACAAGAAACACAAGATGATTCTTCCTCGGACAGTTCTTTCTGCGTTGACGAAAATGGTCTTGACATTGAAAGCTTGAATGCGTTGGATGAAGTTCAAGCAGCACTTCTTCTTAACAAACAGTTGATTACCTGGTTGCAAGCTGCAAAGATGAAGTTTACGACTGTACTTGAGGAAtgtcgaaaaagaaaacaacttGTCGAGCAGAAAATTTTGCAGGCTGCAAAGTCTACTTCTGCCTCAAAAATCACATTCTGTAATGCTGGCATGCCATACTTCAAAGACAAGGCTCGTTTCATTGCACCAATGAATGAAGATGCCAAGATAAAGAAAGCCTGTGGTGAGTTACAGATTGTCCATCTTCCCACTGTTTGTCGGTGGACTCCTAAAGATAGGCGTACGCTCATCAATGCAATCAAACAAGAGGCTATAACGGATGTTTTAAGTAATAAAACGATACTAGGCAAAAGGAAAGCTTCTCATCGAAAGATGACCAATGCACaaagaaaagcagaagaaaGGGCAAATTTGTTACCTAAAAGTTTTCAAGACATTGTTGGACCTTTGGGTGCTAGAGAATTTGACTGGTTGAAAATTGCTGCAACTGATTTTGAAGGTAGGCACTCAGCTGAAGAGTGTCGTGTAATGTGGAATATATTCTTACATCCTGATatcaacaaaacaaaatggtcTAAAGCAGAAGACGCCCATTTGAAGCAACTTGCTGAgcaatataattatgaaaactgGGATGAGATTGCCTTGAAATTGAATACTCGGAGATCAGGCTACCAATGTTTCATTAGGTTCAACACTACCAACCGTCAATTTGGGTTTAAGGGATGTCAATGGAAAAAGGAGGAGGATCAAAGACTTATGGATGCTGTACATAAGCTGAAGCATGGAGACTATATTCCTTGGGGTGAAGTTGCTAGCTGTATGCACAATAGAACAAAGCAACAAGTGTACTTTCGGTGGACCTACAGTCTGGCACCACATTTAAAAAAGGGTCGATTCACAGCAGCAGAAGACAAAATCTTGATGGATGCTGTAGCTAAGTATGGAAAGAACTTTGGAAAAATAGTAGCTCTTTGCATGCCTAACAGAACTACAGTTCAGCTTAGTGATCATTACCAAACGCTAGTCGTGAGAGAAAGCGGAAATCAGAATACATGGAGTCTTGAAGATGATGTACAACTTATTAAACTTCATGTACAGCATGGTTCAAATTGGGCAAGGATTGCTAAACACTTTCCCACAAAGACCAGGATTCAAGTAAGACATCGATTTTCTGCTCTTCTTCGATATCAAAGAAAGGGAATTTCCTTGAAAGATGTTCCACGAACGTACCAAGGGAATTTATCTGCAACAGAAACATTTCCTctagaggagaagaagaatgatGAAGAAACTGCTGAAATAGCTGAAGATGGAATAGATATTGATTCACAGCTTCTATCCTATTTTAAAGAAGTACCATCTCCATCGAAACCtggtagaaagagaaaatcatACAGCCCAGATGAACTCGCGTCGAAAGTTCCGAAATTGTATGAGATTCTACAAAGTTTAAATGCCAAGCTCGTTATCCCTGAGACTCTCCATACAGAGtctttatctttgaaaaataaacaaatactGCATGCCTTAAAGATGTATGGTGAATCGAAAGCAAGAGATGCTGCAGAACGTCGTGAAAGTATAGAAGATCTACAGAAAAGGATGTTTGGTAGCGAACACAACTCAGAGACCTACAACCATTTCGTACCACCACTACCTTTTAATATGATGTCCAGAACTAAAAATGCAATTCACAAGAAAACTTTAGAATACGAATTAAACACTGatcaacaattttttgcaGAAATGAACATGAATCTACAAACtcctgaaaatataatttctgtGATAGGCATTGATTTGCATCTGGAGTTTGAAAAAGTGACTCGGATCTTAATTGCATCGAgtagaaaaatagagaagcaAAATGTCATCAAAAAGATTTACATACTACCTCCACAAAGTGTACAGCCAAAGGTCAATAATTCACATGGTACAAAAAGGCCTGTAGAAAAATACAGTGAAGAAAGTcaggaaaatttccaaataatgTCATCTCTTCCCAACGATCCTAGCACTTCTAGTATTTCAGTCCATTTAAGTACAAAAGATGTAAGTCAATCAGACGCAGCACCATCGTCACGAATAATTCAGGGAACATTGTCATCGTCAGATTACTCAGTGTTCGAACCAAATTATTCGACAGTATTTGGCTTTCGCAATATACTTTCGTCAAAGCAAATGTCAGGCGTAGACGACGAAGGTACAGACGAACAGAGAAACGTGCTCAGACTCCATCCGGATGGCCGTAAAGCGTTTGAGCTGCTGAGACAACGTCttttaaaattgttcaaaGTTCCAGTAGGCATGTCACAAATTCTGCCACCCGAAATACATGGTggagagaaaatatttctgtccTACGCAGAGAATGTGctgaaaagtaaattaaaaactaaaagtaaaaaagtcatTGTTCCCAAAGAGACAATTAAAACTGAAATGGAACCACGTGTTAAAAAGGAAAGAGTCGATCATCCAGGTGAGACTGTACACAGCTTAGGTCTAAttgatgattaa
Protein Sequence: MSDLEDYTLLDDIKALENALAQKNQSPSPSTSTTAKNVVSNLYEKRDSVTLTQETQDDSSSDSSFCVDENGLDIESLNALDEVQAALLLNKQLITWLQAAKMKFTTVLEECRKRKQLVEQKILQAAKSTSASKITFCNAGMPYFKDKARFIAPMNEDAKIKKACGELQIVHLPTVCRWTPKDRRTLINAIKQEAITDVLSNKTILGKRKASHRKMTNAQRKAEERANLLPKSFQDIVGPLGAREFDWLKIAATDFEGRHSAEECRVMWNIFLHPDINKTKWSKAEDAHLKQLAEQYNYENWDEIALKLNTRRSGYQCFIRFNTTNRQFGFKGCQWKKEEDQRLMDAVHKLKHGDYIPWGEVASCMHNRTKQQVYFRWTYSLAPHLKKGRFTAAEDKILMDAVAKYGKNFGKIVALCMPNRTTVQLSDHYQTLVVRESGNQNTWSLEDDVQLIKLHVQHGSNWARIAKHFPTKTRIQVRHRFSALLRYQRKGISLKDVPRTYQGNLSATETFPLEEKKNDEETAEIAEDGIDIDSQLLSYFKEVPSPSKPGRKRKSYSPDELASKVPKLYEILQSLNAKLVIPETLHTESLSLKNKQILHALKMYGESKARDAAERRESIEDLQKRMFGSEHNSETYNHFVPPLPFNMMSRTKNAIHKKTLEYELNTDQQFFAEMNMNLQTPENIISVIGIDLHLEFEKVTRILIASSRKIEKQNVIKKIYILPPQSVQPKVNNSHGTKRPVEKYSEESQENFQIMSSLPNDPSTSSISVHLSTKDVSQSDAAPSSRIIQGTLSSSDYSVFEPNYSTVFGFRNILSSKQMSGVDDEGTDEQRNVLRLHPDGRKAFELLRQRLLKLFKVPVGMSQILPPEIHGGEKIFLSYAENVLKSKLKTKSKKVIVPKETIKTEMEPRVKKERVDHPGETVHSLGLIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198593;
90% Identity: -
80% Identity: -