Basic Information

Insect: Pachycephus smyrnensis
Gene Symbol: grh_1
Assembly: GCA_030142225.1
Location: JARQST010000055.1:1150994-1158773[+]

Transcription Factor Domain

TF Family: CP2
Domain: CP2 domain
PFAM: PF04516
TF Group: Beta-Scaffold Factors
Description: This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.5e-62 4.4e-58 196.4 0.0 28 221 342 537 327 539 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.5e-62	4.4e-58	196.4	0.0	28	221	342	537	327	539	0.92

Sequence Information

Coding Sequence: ATGGGCCAGAAGCTGCTGGTGCAGGAGGCGCCTGGCCCAGGACCGGGGCCTGGTTCAGCGAATAGAATGGAAGGAGGCGAGGGCAACggcggagggggaggggaaCTCCACCACTTCCTTCATCAGTACAACCAACAATCTCACAGTCCTGGCCAGAGCCTTCAGGGTGGTCTTCCGCTTCCGTTAAGTCCGCAATCGTTACGCCACGACGGAACGTCGAGTGGTGGGATTGCCGGGGTCAAAAGGGAACCCGAAGACCTTAGCTCGTCCCGCGGGGGTCAGCAGTCCAACAAACGGCACAAACAGGCCCAACCTGACAGTCCAACGCCGCCAGGGATGTACCACCATCACCAGCATCAGTTACAGGTGCAGCAGCAATACGGCAGCCCGTACGATCCTTACTCATCCTGCAGTCCACGATTGCAGTCTACAGCTTACACTTCGACCTCGGGCAACGCTGCGGGAAATGCAGCCAATCCGACGGCACTTCATCAGGAGGCCACTGCGGTATATGTCACTGGCGATGCACTTCCACCTTTAGCGTCATCCAGCTCATCCTCGTTGTCCACGACAACCGCTTCGTACACGAGGTACGAGGTTGTACCGAGCTCTTATGCTACGACACACGCGATTCGCTCGTCATCGAGCAGCAGCAAAGTGTTGACCGTTGATCTTCCCAGCCCTGATTCCGGTATCGGTGCCGATGCTGTCACCCCGAGACAAGATCATCATCCACCCACGGCTCTGCATCAGTCGTCCTTTGACTACACGGAGCTGTGTCCTGGTGGACCAACCGCAGGCGCCGCAGTCGTACTGGAGAGTGGCGCTGTAATACATCATCAGCCATTGCAACTGCAATTGCAACAGAGCCATACGCAGGCACAAGTGCAACGAGGTACACTAGTTGCGGCGGGTGCAACTAACCCAAACCCAAACCCAAACCCTCCGAGATCCAGACCCTGGCATGATTTTGGTAGACAGAACGATGCCGACAAGATACAGATACCAAAActCTACTCGGCGTACGGATTCAAATATCATCTGGAATCGCCCATCAGTACGTCGCAGCGACGCGAGGACGACAGAATAACGTATATCAATAAAGGACAGTTTTATGGTATCACGTTGGATTACGTGCCGGATCCTGACAAGCCTCTGCTCAAGGCAGGACAAACGGTgaagAGCGTTGTAATGCTGATGTTCCGAGAGGAGAAGAGTCCTGAGGATGAGATAAAGGCTTGGCAATTCTGGCATGGTAGACAGCACTCCGTTAAGCAACGTATCCTTGACGCTGATACTAAAAATAGCGTAGGTCTCGTTGGCTGTATCGAGGAAGTGGCTCACAATGCAATAGCTGTATACTGGAATCCATTAGAATCTTCGGCCAAGATCAACGTGGCAGTACAGTGTCTGAGCACGGATTTCTCCAGTCAGAAGGGTGTAAAGGGTTTGCCTTTACATATTCAGGTAGACACGTACGAAGAACCACCGCCGCATCCTCACTCTTATACTCCTCCGTCTCACAGAGGTTACTGCCAGATAAAGGTCTTTTGCGAtaagGGCGCGGAGAGGAAGACGCGTGACGAGGAGAGAAGAGCGGCAAAGCGAAAAATGACGGCAACAGGAAGAAAGAAGCTGGACGAACTTTATCACTCGGTGACGGAACGcagtgaattttattcaatggcCGATCTTCACAAACCTCCTGTGCTCTTTTCCCCGCCTGCCGAACACGCCATTGATAAGTTCTCAACGATGGAGTTGTCGGGATTCTACggaggtggaggtggcggGGGCGGGGGCGACACGGACACTTCATCCCTCAGTAACGGTGAGGGTGGAGGATTAAAGGCAGGGGGTAGCAGCCCTTATCCCGCATGCGGCAGACCAAGCCTGCCAGCTCTCAAGTTTCACAACCATTTTCCACCCGACAATCTGAGTTCCCTCCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTCCAGGGCTCGGTACTCCAGGGTGTGCAGCAGGGCAACTTGGGCTCGGGCACTGTGGTCTCGGGTGTCGGTAACAGGCTTCAcatgcagcagcagcacctACGCGGCGCCGACGCCGAGGAGCGTGTGATGCTCTACGTTCGCCAGGAATCCGAGGACGTCTACACGCCGCTTCATGTGACGCCACCGTCGGTCCAGGGACTTCTCAACGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGACATGATACGCTACTACGTTGACGAGGATCTCTTCCTTCTGGAGGTGAGCCACTCGCACGTTAATCCCGATCCGAATTCCGATCGCAATCCCAATCCAGGATCACCGGGTGATCCTGGGGATCCTGGTGATCCACCCTCCGCTGGCTACGACGTCACTCTCATCGAACTTTCGTCCTCGCCGACGCCGTTACCGCCCTCGCCGCTTACCGTCACtgcggcgcatgcgcacgctCACAGCCATCCCCACGTGCACTCGCACGTACACGAGACCGGAAACACGTGA
Protein Sequence: MGQKLLVQEAPGPGPGPGSANRMEGGEGNGGGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGTSSGGIAGVKREPEDLSSSRGGQQSNKRHKQAQPDSPTPPGMYHHHQHQLQVQQQYGSPYDPYSSCSPRLQSTAYTSTSGNAAGNAANPTALHQEATAVYVTGDALPPLASSSSSSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGPTAGAAVVLESGAVIHHQPLQLQLQQSHTQAQVQRGTLVAAGATNPNPNPNPPRSRPWHDFGRQNDADKIQIPKLYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHPHSYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGEGGGLKAGGSSPYPACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVQQGNLGSGTVVSGVGNRLHMQQQHLRGADAEERVMLYVRQESEDVYTPLHVTPPSVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSHVNPDPNSDRNPNPGSPGDPGDPGDPPSAGYDVTLIELSSSPTPLPPSPLTVTAAHAHAHSHPHVHSHVHETGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01089761;
90% Identity: iTF_01537609;
80% Identity: -