Psmy007165.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Atf2
- Assembly
- GCA_030142225.1
- Location
- JARQST010000364.1:115554-117652[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-11 2.3e-08 34.1 7.2 4 65 324 385 322 385 0.95
Sequence Information
- Coding Sequence
- ATGACCGATTCCGAAAAGCCCTTTGCCTGTCCTTCGCCGGGATGTAATATGAGTTTTACTAATGAGGATCATCTAATGGTCCATAAGAAAAAACATGATATGGTATTAAATCTTGGAGCAAATGGAAAGAGTAATGTCTTTGTGGcTGATCAGACTCCGACGCCTACAAGATTCATTAGAAACTGCGAGGAAGTCGGTCTATTTCAAGATTTGCAGAATGTAAATCCTTTTGAGGAAACCTTTCGAAGAGCAGTGGAGGCAGGAAAGAGTGGATCACTAGCAGTACCtgaaGTAGGCATCTCTGACGATACACTACATACTCCACATATATTTCCACATATATCAGATGTACAGCAGACAAATGGTCAAATCCTTGCAGAAAATGTCTCCCAAGAAACACCTTCTATCACTATTACAGAAGTAGCAACCAATCAGGCAAAGAATACTTGCATCGAAGTGTGTGCTAACAGAGCAATAAAGCAGACTGACTCGAAGGAAATCAAAAATGTGGAAATAATAACTACTAAAGAAACAGGACATACAGCGGAAACAATTATTGTCCAAGAAACAGATACttcaataacaacaaaaatcaTACAAGCACCCACATCGCCTCAACTATCTATCAACGGAGAAGAGGTACAATTACTATTGAAGACTGCAGATGgaaaattaatgcaattatCAGCAATTCCAGTTTCCGAGCCGTGTAACAATTCTACTACGTCCATTCAGCAAACCAAAGCATCTACTGTTGTTATAAAGACAGAACCGCCATTGCGATGTGCAAACAAGAACGAACCAAAAAGAACGGCGTCGTCTAGGCTTTCATTAGCaaaaatgAAGTTGAAGCAAGTTCTGACAAAGAACGGTGCAAACAGTGACAATCCCAAGTCCAGACATTTAGAAGATGATGGCGGCGAGTCAGCAACAACAAGCGATAATCAAAACAGAAATATAGACCCTCATAAGAAACGGGAAATTCTAGAACGAAATCGTGCCAGTTCAATGCGTGCCCGTGCGAAACGTAAAGCTTGGATTCAACAACTGGAAAGAACTGTAAATAACGTTAACGAGACTAACGCAGTTTTGCAAATGGAAGTACGAGCTCTCCGTTCTGAAGTAGCTAAACTAAAGACGCTTCTTCTGGCGCACAAAGACTGTCCCGTAACAAAGGCAATGGAGAAGGGAAACGGAATAATCGTAGGACCCAAAGTGATCTCGATGAATCCGGAAGTGATACAAGCCATACCAGTATCCACTAGCATTAATGTACCTATCAAAAGAACAGCAGCGTCACCGGACGTATCTATAGcgccaaaaaagaaattatcctTTGCTGGGACCGTCTCAAAGAATCCAGTAATCTTACCGAAATCCGATAACACACTAGGCAGTGCAAAAATCGTGCGAAATCTCTCAGCTTTGAAGATCGTCGAAGTGGGTCATTTCTTGAATGAAAAGGAACGCGGGAAGCAGATCCTTATTGTGCAGAGTCCATCTGGCAAAGTCGCAGAAGCATCCTCGAGGCcgattattcaaataaatccAAGTTTTGAGATGGAAAACGCAGCGTCCAAGAGTACAGGAACGTAG
- Protein Sequence
- MTDSEKPFACPSPGCNMSFTNEDHLMVHKKKHDMVLNLGANGKSNVFVADQTPTPTRFIRNCEEVGLFQDLQNVNPFEETFRRAVEAGKSGSLAVPEVGISDDTLHTPHIFPHISDVQQTNGQILAENVSQETPSITITEVATNQAKNTCIEVCANRAIKQTDSKEIKNVEIITTKETGHTAETIIVQETDTSITTKIIQAPTSPQLSINGEEVQLLLKTADGKLMQLSAIPVSEPCNNSTTSIQQTKASTVVIKTEPPLRCANKNEPKRTASSRLSLAKMKLKQVLTKNGANSDNPKSRHLEDDGGESATTSDNQNRNIDPHKKREILERNRASSMRARAKRKAWIQQLERTVNNVNETNAVLQMEVRALRSEVAKLKTLLLAHKDCPVTKAMEKGNGIIVGPKVISMNPEVIQAIPVSTSINVPIKRTAASPDVSIAPKKKLSFAGTVSKNPVILPKSDNTLGSAKIVRNLSALKIVEVGHFLNEKERGKQILIVQSPSGKVAEASSRPIIQINPSFEMENAASKSTGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394885;
- 90% Identity
- iTF_00770130;
- 80% Identity
- -