Psmy010699.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- HLF
- Assembly
- GCA_030142225.1
- Location
- JARQST010000558.1:450856-454765[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-12 9.8e-10 38.5 8.9 1 63 147 209 147 211 0.97
Sequence Information
- Coding Sequence
- ATGGGATCCCACGCGCACGCTACGTCCATCTGTGCCGGGAGGTCCGTATCCGGTGCGTTTTCCGCGTTGCATCTTCTCAGGAGTTACAGCCTCCTTGCTCCGCCTTCAGACTTGTGCAGGTATGATCCATTTCCTGCGAGAGATTATGGTTTTGGAGAACCTGATCCACCAAGAAGTGGCTCTACCGGCGAAACACCTGTGTCACCCTTAACTCCTTCTTCGCTAACAGCACCGTTCTCAATACCGACTAGTTTATTACCACCGCCACTTCTCGCGGCGGTGCCGCCATTAATTCAATCGATAAATGTACCTCAGCCATTTTCCAATTCCGCGAATGCAGGAACGTTGGGGAATCATCATTTCATCAGTAGCAATGGTATCACGAATATCCAACAGAGAAGACCACGTGGTGAGAAGAAACCCATTCCTGAGGATCAGAAAGACGAGAAATATTATGAAAGACGAAAACGTAACAATCAAGCAGCCAAGAAGTCCCGCGACGCTCGTAAAATTCGCGAAGATCACattgCTCTAAGAGCGACCATGTTGGAGCACGAGAATGCCATCTTGCGTGCTCAGGTAGTAACTCTTCGTGAAGAAGCACAATCTCTTCGTCATATGTTGATAAAGCAACAGACACCCGGTATACAAACGATTGATTCTGCTGCAAAGCCGCTTTCTTCGGTAACACCCAGCACACTATCGCCTCAGAATCCCGTTACATCTATATCTTGTCAAGtttaa
- Protein Sequence
- MGSHAHATSICAGRSVSGAFSALHLLRSYSLLAPPSDLCRYDPFPARDYGFGEPDPPRSGSTGETPVSPLTPSSLTAPFSIPTSLLPPPLLAAVPPLIQSINVPQPFSNSANAGTLGNHHFISSNGITNIQQRRPRGEKKPIPEDQKDEKYYERRKRNNQAAKKSRDARKIREDHIALRATMLEHENAILRAQVVTLREEAQSLRHMLIKQQTPGIQTIDSAAKPLSSVTPSTLSPQNPVTSISCQV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01198422;
- 90% Identity
- iTF_01394883; iTF_01472932; iTF_01474437; iTF_01475205; iTF_01473673; iTF_00292045; iTF_00251822; iTF_00297300; iTF_00254837; iTF_01199160; iTF_00252570; iTF_00254074; iTF_00298062; iTF_00296527; iTF_00294997; iTF_01198422; iTF_00770128; iTF_00253320; iTF_00295762; iTF_00292696; iTF_00291290; iTF_00293471;
- 80% Identity
- -