Psmy013307.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Xbp1_1
- Assembly
- GCA_030142225.1
- Location
- JARQST010000725.1:193991-195720[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-15 7.8e-12 45.2 15.8 2 64 74 136 74 137 0.95 2 2 2.3 2e+03 -1.0 0.2 35 49 202 216 198 221 0.74
Sequence Information
- Coding Sequence
- ATGAACGGCTTGAAAAGTGTTATAATTACTTTGCCTAAAGGGCTGGCGAAGAGCGTTAatccaaaattgaattttaccaCGTCGATACTGGCAGATAAGACCAAGATGGACATCAGGAACGTTCCACAACAGATGGATGAAGATTCTACGGATTCTTCGCTCTTCAAGAGTGATCTTTGTCTTCGTGGAAAGAAACGACGACTGGATCACCTCACCTGGGAAgagaaattacaaagaaaGAAGTTGAAGAATCGTGTTGCTGCACAAACATCACGTGACCGTAAGAAAGCAAAGCTAGATGAACTGGAAGAGACAGTAAGAGTGCTTCAAGAACGAAATGAACAGTTATCGAGAGAATGTTCAGTATTGAGGAGCACCAACGAAAGTTTAATGGTAGAGAATAGAAAACTTAGGAGAGACAAGAGTTCCGAAGTTGAGCAACCAGTCTGCTCAGCATGGTGGGGTAGCACAGCCGGCACAAAGCCTGGCGAAGCTGTCGGCGACAGGAAGCTTGACACCAGCAGCCAACACTCTCCTGAGGATCCTAACCCTCTACCTCCTCTCGAAGAGCTCTTCGCTGAACTCCAAGGCGACGATTACATCGAGCGACTTGAGGAGCTTGCCGAAAGTCTTCTGCGAGAAGTTACCGCTGAAGTGGAAGCAAATACTCCTAGATCAAACGACCAAGCTCCGCTCGCGGAAGATACCAGCGCCAAACGTGACGATACGTCAGGAATGGTGGGGACGACACCAGAAGATGTGGAAGCCAATGGAACCGATGGAGTCGCGGGCGGGTTCACCGGTTCCAGTATGCTAATCTCGACCGAACCACTCGTTCCAGTTCAGGTTAAACAAGAGAGTCCGGACACGATATACGGCAGTTACGACGAGGCTACAAATTGCATCACAATAATATGTCCCGACGAGGAGGACGTAGATCTCCACGAAGAGATCGTAACGGAGGAAGTCATTGCGGACGAGTCTTTACAATCCAGCGTTCATCTGTCACCCGACACCTGCACCGAGTACACCATGTCACCGCAATCCGTCAGGTCAGAGGACGCAGCACTGTCTGGAAAAATGGACTGTGGTCTCTCGGATTGCGGCTACGAGTCTCACGAAGCTTCGAGTCCAGAAGCTCCGGCTCTTACGGAATTATGGCACGAAAGCTTCTCAGAACTTTTTCCAAGTTTAGCCTGA
- Protein Sequence
- MNGLKSVIITLPKGLAKSVNPKLNFTTSILADKTKMDIRNVPQQMDEDSTDSSLFKSDLCLRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRVLQERNEQLSRECSVLRSTNESLMVENRKLRRDKSSEVEQPVCSAWWGSTAGTKPGEAVGDRKLDTSSQHSPEDPNPLPPLEELFAELQGDDYIERLEELAESLLREVTAEVEANTPRSNDQAPLAEDTSAKRDDTSGMVGTTPEDVEANGTDGVAGGFTGSSMLISTEPLVPVQVKQESPDTIYGSYDEATNCITIICPDEEDVDLHEEIVTEEVIADESLQSSVHLSPDTCTEYTMSPQSVRSEDAALSGKMDCGLSDCGYESHEASSPEAPALTELWHESFSELFPSLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253313;
- 90% Identity
- iTF_00253313;
- 80% Identity
- -