Psmy005510.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Tef
- Assembly
- GCA_030142225.1
- Location
- JARQST010000309.1:3421389-3422327[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-17 4.5e-14 52.4 7.7 4 62 251 309 248 311 0.95
Sequence Information
- Coding Sequence
- ATGGAGGATTACCAAACGGCCATGGAGAATCTAGAAGCGTTAGATTTCACGCAGAATTTGAAGCAGAAAGTCAACGATGGTTCATTGGAGACACCGGTGCTGGATCTTTCCTGTAAGAAACAAACACGGATTATGAATGATTGTTTGTCAATGGGATATGAAGAATCCGTGGAGTGCATTTCGAATAGTCGTCAACAACAGTCTGTACATCAGTGCTCTGAATTGGAAAGGAAAAGTCCATTCGAAGGACGTACCTTCATGGTGACGCCACCGTCGGAAACGGATTCGCcaaagaagataaaatatgAGGCAATTTACAATCAAAAAGGAATTAGCACAAGTAACGAGACAATGGGTCATCAAACTTATCCTATAATGCCAATAGTTTCCATACCAACGCCCAGTGTATTGTCTGGCTTACTTCCCATTGGACAGAGCATCATGCCTTCTTCGAGAGATACGCAACTTCCGGTTTCTACTGTCAATCAAGATACGTCCTCTCCGTCCCACTCGCCGGAAACGACGAAAAAGGCGCCAAGACCCTTCAAAGCTTATCCTAAGGATCCTCTTTCCCTGGCCATGGGCACGGCTGAGCTGGTTTATGATCAAAATTCGAATGAGGCTTACTCGGAATTTCGTAAACGGATGCTGGAGTCTGTGAGGAGGACCAATGAGGGTACCAATATCAAGATGAGGAGAGTGACCAAGAGTCCTGGCTTGCCGACTAGTACGGTCGATGAGAAGGATGCTGCTTATTGGGAGAGAAGACGGAAGAACAACGAAGCTGCAAAACGGTCCAGGGACGCCAGAAGAGCGAAGGAAGATGAAATTGCTATCAGGGCTGCATTCCTTgaacaagaaaatatgaaattgaagtaCGAATTGGTAGCGTTAAGAAACGAGACGGCTAAGCTCAGATGCATGGTCTATTCTAATTGA
- Protein Sequence
- MEDYQTAMENLEALDFTQNLKQKVNDGSLETPVLDLSCKKQTRIMNDCLSMGYEESVECISNSRQQQSVHQCSELERKSPFEGRTFMVTPPSETDSPKKIKYEAIYNQKGISTSNETMGHQTYPIMPIVSIPTPSVLSGLLPIGQSIMPSSRDTQLPVSTVNQDTSSPSHSPETTKKAPRPFKAYPKDPLSLAMGTAELVYDQNSNEAYSEFRKRMLESVRRTNEGTNIKMRRVTKSPGLPTSTVDEKDAAYWERRRKNNEAAKRSRDARRAKEDEIAIRAAFLEQENMKLKYELVALRNETAKLRCMVYSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394869;
- 90% Identity
- iTF_00292683;
- 80% Identity
- -