Psmy010438.2
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- HLF_1
- Assembly
- GCA_030142225.1
- Location
- JARQST010000539.1:288341-294852[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-17 1.7e-14 53.7 8.9 1 64 203 266 203 267 0.97
Sequence Information
- Coding Sequence
- ATGCGAGACGAAAGTGAATCTCCTACAGGACAACAGGATCTCTTCGATTCTAGAGGGAAACAAGGCAAGGATGGAccagaagagaagaaagacgCCGACGGCGAACTCTGGGGCAACGTGGAAGCGCAGGCCGCCTTCCTTGGTCCAAATTTATGGGACAAAACTCTGCCCTACGATGCCGACCTGAAGGTATTAAATCATTACGTGGACCTGGACGAATTCCTCTCGGAAAATGGTATCCCTGTCGATGGCGTTGCCGGGGGCGGACAAGGTACGATGCAGGGCGGCCAATTGCACAAGATGAACAACAACGAAGCTGGCGGTCATCAAGGACCGGCAGGTCTTCATCTCGAGCCGGTTACAAAACGTGAAAGATCACCATCGCCGAGTGAGTGCTGCTCACCGGATACTCTCAATCCACCATCACCTGCAGATTCCAATTCCGAGGACTCGTCACGAATACAATATGGCTTGTCTCTTGTAGCGCTCTCGATGGCGTCATCGGGGCGAGACTTCGATCCCCGCACCCGCGCCTTCTCCGACGAGGAACTGAAGCCCCAACCGATGATCAAGAAGTCACGGAAACAGTTCGTTCCGGACGACTTGAAGGATGACAAATACTGGGCGCGTCGCAGGAAGAACAACATGGCGGCGAAGAGATCGCGAGACGCGCGTCGCATGAAGGAGAATCAGATAGCCCTGAGAGCCGGCTTCCTGGAGAAGGAGAATATGGGTCTGCGACAGGAATTGGATCGGTTAAAGAACGAGAACATGCTTTTGCGTGATAAGCTCAGCAAATACACGGACGTCTAA
- Protein Sequence
- MRDESESPTGQQDLFDSRGKQGKDGPEEKKDADGELWGNVEAQAAFLGPNLWDKTLPYDADLKVLNHYVDLDEFLSENGIPVDGVAGGGQGTMQGGQLHKMNNNEAGGHQGPAGLHLEPVTKRERSPSPSECCSPDTLNPPSPADSNSEDSSRIQYGLSLVALSMASSGRDFDPRTRAFSDEELKPQPMIKKSRKQFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIALRAGFLEKENMGLRQELDRLKNENMLLRDKLSKYTDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394867; iTF_00738081; iTF_00295747; iTF_00254821; iTF_00297285; iTF_01198407; iTF_00292681; iTF_01199145; iTF_00252554; iTF_00254058; iTF_00291276; iTF_00293456; iTF_01474419; iTF_01472916; iTF_01475189; iTF_00253305; iTF_00251805; iTF_00298047; iTF_00294208; iTF_00296512; iTF_00770112; iTF_00294982; iTF_01269542; iTF_01089737; iTF_01413897; iTF_01233386; iTF_01523115; iTF_00729037; iTF_01453837; iTF_01113168; iTF_01112324; iTF_01492624; iTF_01537584; iTF_01255281; iTF_01411218; iTF_01199881; iTF_01303049; iTF_00939258; iTF_00756374; iTF_00460231; iTF_00127191; iTF_00127929; iTF_00129472; iTF_01228760; iTF_01473658; iTF_01109852; iTF_01513216; iTF_01513923;
- 90% Identity
- iTF_00295747;
- 80% Identity
- iTF_01394867;