Psmy002400.1
Basic Information
- Insect
- Pachycephus smyrnensis
- Gene Symbol
- Atf6b_1
- Assembly
- GCA_030142225.1
- Location
- JARQST010000171.1:1-2370[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-18 2.8e-15 56.2 9.2 2 57 131 186 130 191 0.94
Sequence Information
- Coding Sequence
- ATGATAGTTCTCAGTGCACAAGATTTCGCTGCTTTGACGGAAAGAGTGAAGCAAACTAATCCATCgcaatcattgaaaataaaatcactGCCTACGAAGAAACCTAACAAGGTGCCGAATCCTCTAAATAGAACAGAACAGTTGAACACAATTCAATTCGCTTCACAAAATCaagtgaaaattatcaatGCCATTTCAAATGTTCAAACGCAAACCAGAAATACTCCAGTTAATATAACGAATGCCCCAATTGTGATAAAAAATGACAGTACAGGAGGATGTACGCCTATTGTCTTGAGGAATGAAAATTCGACCTGCACACCGATCATGGTACAGAATGAAAATCCGGAAATAATGCATCTTATCGGCAAGCAAGAATGTGAAATTAAGGCACTTAAAAGACAACAGCGAATGATAAAGAATCGAGAGTCGGCCTGTTTgtcgagaaaaaagaaaaaagaatatataacaTCACTAGAGAAACAAATTTCCGATCTACAAGATGAGAACAGACAACTGAAAGTGGAGAATACGGcgctgaaacaaaaattatatgctTTCGAAGAAATGACGGGAACGAGCAACAAATTCGGCAACCTGAATCTTagcataaacaaaaaaaacactacTATATTGCTTGCCATGGTTTTTATGGTGTCCCTTAATGTGGGTAGCTTTGG
- Protein Sequence
- MIVLSAQDFAALTERVKQTNPSQSLKIKSLPTKKPNKVPNPLNRTEQLNTIQFASQNQVKIINAISNVQTQTRNTPVNITNAPIVIKNDSTGGCTPIVLRNENSTCTPIMVQNENPEIMHLIGKQECEIKALKRQQRMIKNRESACLSRKKKKEYITSLEKQISDLQDENRQLKVENTALKQKLYAFEEMTGTSNKFGNLNLSINKKNTTILLAMVFMVSLNVGSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394868;
- 90% Identity
- -
- 80% Identity
- -